KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:15 2014 Check: 00 .. Name: ENSP00000301729/1-302 Len: 303 Check: 6781 Weight: 1.00 Name: ENSBTAP00000013144/1-303 Len: 303 Check: 6929 Weight: 1.00 Name: ENSTTRP00000007780/1-301 Len: 303 Check: 6297 Weight: 1.00 Name: bmy_02718T0/1-302 Len: 303 Check: 8961 Weight: 1.00 Name: BACU019415/1-257 Len: 303 Check: 5191 Weight: 1.00 // 1 50 ENSP00000301729/1-302 MALVASVRVP ARVLLRAGAR LPGAALGRTE RAA-GGGDGA RRFGSQRVLV ENSBTAP00000013144/1-303 MALASGVRFA ERALLRPWAL LRGTTLGRTE PAAGGGGDGA RRFGSQRVLV ENSTTRP00000007780/1-301 MALAAGARVL SR-LLCPWAL LRGATIRRTE PTA-GSVDSA RRFGTQRVLV bmy_02718T0/1-302 MALAVGMRGF SRALPRPWAL LQGATIRRTE PAA-GGGDSA RRFGTQRVLV BACU019415/1-257 MSFVLFIFKL ---------- ---------- ---------- ---------- 51 100 ENSP00000301729/1-302 EPDAGAGVAV MKFKNPPVNS LSLEFLTELV ISLEKLENDK SFRGVILTSD ENSBTAP00000013144/1-303 EPDAASGVAV MKLRNPPINA LSLELLTELV ISLEKLENDK TFRGVILTSD ENSTTRP00000007780/1-301 EPDAAAGVAV MKFKNPPVNS LSLELLTEFI ISLEKLENDK TFRGIILTSD bmy_02718T0/1-302 EPDAAAGVAV MKFKNPPVNS LSLELLTEFI ISLEKLENDK TFRGVILTSD BACU019415/1-257 ------GVAV MKFKNPPVNS LSLELLTEFI ISLEKLENDK TFRGIILTSD 101 150 ENSP00000301729/1-302 RPGVFSAGLD LTEMCGRSPA HYAGYWKAVQ ELWLRLYQSN LVLVSAINGA ENSBTAP00000013144/1-303 CPRVFCAGLD LTEICGRNPA HCAEYWKAMQ ELWLRTYLSS LVLVAAINGA ENSTTRP00000007780/1-301 CPRIFSAGLD LTEMCGKNPA HYAEYWKAVQ ELWLRLYLSN LVLIAAINGA bmy_02718T0/1-302 CPRVFSAGLD LTEMCGKNPA HYAEYWKAVQ ELWLRLYLSN LVLIAAINGA BACU019415/1-257 CPRVFSAGLD LTEMCGKNPA HYAEYWKAVQ ELWLRLYLSN LVLIAAINGA 151 200 ENSP00000301729/1-302 CPAGGCLVAL TCDYRILADN PRYCIGLNET QLGIIAPFWL KDTLENTIGH ENSBTAP00000013144/1-303 CPAGGCIIAL SCDCRVLADN PKYRIGLNET LLGIIAPFWL KDTYVNTIGH ENSTTRP00000007780/1-301 CPAGGCLISL TCDYRILADN PKYLIGLNET LLGIVAPFWF KDTLVNTIGH bmy_02718T0/1-302 CPAGGCLISL TCDYRILADN PKYLMGLNET LLGIVAPFWF KDTFVNTIGH BACU019415/1-257 CPAGGCLISL TCDYRILADN PKYLMGLNET LLGIVAPFWF KDTFVNTIGH 201 250 ENSP00000301729/1-302 RAAERALQLG LLFPPAEALQ VGIVDQVVPE EQVQSTALSA IAQWMAIPDH ENSBTAP00000013144/1-303 RASEQALQLG SLFPPAEALQ VGLVDQVVPE DQVQSTALSE MARWLAVPDH ENSTTRP00000007780/1-301 RASEQALQLG LLFLPAEALQ VGLVDQVVPE DQVLSTALSV MARWMAIPDH bmy_02718T0/1-302 RASEQALQLG LLFRPAEALQ VGLVDQVVPE DQVLSTALSV MARWMAIPDH BACU019415/1-257 RASEQALQLG LLFRPAEALQ VGLVDQVVPE DQVLSTALSV MARWMAIPDH 251 300 ENSP00000301729/1-302 ARQLTKAMMR KATASRLVTQ RDADVQNFVS FISKDSIQKS LQMYLERLKE ENSBTAP00000013144/1-303 ARQLTKNMMR KATADRLLRQ RDADTQNFVS FVCRDSIQKS LQAYLEKLRQ ENSTTRP00000007780/1-301 ARQLTKNMMR KTTVDRLVKQ RDADIQNFVS FISRDSIQKS LQMYLEKLKQ bmy_02718T0/1-302 ARQLTKNMMR KTTVDRLVKQ RDTDIQNFVS FISRDSIQKS LQMYLEKLKQ BACU019415/1-257 ARQLTKNMMR KTTVDRLVKQ RDTDIQNFVS FISRDSIQKS LQMYLEKLKQ 301 350 ENSP00000301729/1-302 EKG ENSBTAP00000013144/1-303 RKG ENSTTRP00000007780/1-301 KKG bmy_02718T0/1-302 KKG BACU019415/1-257 KKG