KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:49:15 2014 Check: 00 .. Name: ENSTTRP00000006115/1-341 Len: 528 Check: 5857 Weight: 1.00 Name: ENSP00000451974/1-346 Len: 528 Check: 4756 Weight: 1.00 Name: bmy_05899T0/1-522 Len: 528 Check: 9000 Weight: 1.00 Name: ENSBTAP00000013145/1-341 Len: 528 Check: 1507 Weight: 1.00 // 1 50 ENSTTRP00000006115/1-341 ---------- ---------- ---------- ---------- --MDVDQLDL ENSP00000451974/1-346 ---------- ---------- ---------- ---------- --MDLDLLDL bmy_05899T0/1-522 MRVGGRVRLQ GALVHRTAKA GSTGHPDRHG DTLKGTHTGE CKAGSTQLDL ENSBTAP00000013145/1-341 ---------- ---------- ---------- ---------- --MDLDRLDL 51 100 ENSTTRP00000006115/1-341 NPRIIAAVKK ---------- ---------- ---------- ---------- ENSP00000451974/1-346 NPRIIAAIKK ---------- ---------- ---------- ---------- bmy_05899T0/1-522 NPRIIAAVKK GVFADVYIKW LYKSMNVHTY TPYVEQAYKV ACPSLGDPLV ENSBTAP00000013145/1-341 NPRIVAAVKK ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006115/1-341 ---------- --------AK LRSVKEVLHL SGPDLQRLTR LSGPDVQRLL ENSP00000451974/1-346 ---------- --------AK LKSVKEVLHF SGPDLKRLTN LSSPEVWHLL bmy_05899T0/1-522 TDPGQPVLIN ALMLECAAAK LRSVKEVLHL SGPDLQRLTR LSGPDVQRLL ENSBTAP00000013145/1-341 ---------- --------AK LRSVKEVLHL SGPDLQRRTH LSSPDVQLLL 151 200 ENSTTRP00000006115/1-341 KAASSHLQGS SVCTALHLLQ QEEQFPEQHE RLSLGCPVLD GLLRGGLPLD ENSP00000451974/1-346 RTASLHLRGS SILTALQLHQ QKERFPTQHQ RLSLGCPVLD ALLRGGLPLD bmy_05899T0/1-522 RAASSHLRGS SVCTALQLLR QK------RQ RLSLGCPVLD GLLRGGLPLD ENSBTAP00000013145/1-341 RASASLLRGH GVCTALHLLR QEGPFPEQHQ RLSLGCPVLD ALLRGGLPLD 201 250 ENSTTRP00000006115/1-341 GITELAGRSS AGKTQLALQL CLAVQLPRRH GGLGAGAIYV CTEDAFPSQR ENSP00000451974/1-346 GITELAGRSS AGKTQLALQL CLAVQFPRQH GGLEAGAVYI CTEDAFPHKR bmy_05899T0/1-522 GITELAGRSS AGKTQLALQL CLAVQLPRRH GGLGAGAVYV CTEDAFPSRR ENSBTAP00000013145/1-341 GITELAGRSS AGKTQLALQL CLAVQLPPRH GGLGAGAVYV CTEDAFPSRR 251 300 ENSTTRP00000006115/1-341 LQQLIAQQQR LRIDVPGDV- QKIKF--DIF IEHI-DVXXX XXXXXXXXXX ENSP00000451974/1-346 LQQLMAQQPR LRTDVPGELL QKLRFGSQIF IEHVADVDTL LECVNKKVPV bmy_05899T0/1-522 LQQLIAQQQR LRTDVPGDVV RKIQFGHQIF IEHAADVDTL LECVRKKVPV ENSBTAP00000013145/1-341 LQQLIAQQQR LRADVPGHVI SKIRFGHQIF IEHAADVDTL LQCVREKVPV 301 350 ENSTTRP00000006115/1-341 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000451974/1-346 LLSRGMARLV VIDSVAAPFR CEFDSQASAP RARHLQSLGA TLRELSSAFQ bmy_05899T0/1-522 LLSRGMARLV VIDSVAAPFR CEFDQASSAL RARRLQALGA ELRRLSCTFR ENSBTAP00000013145/1-341 LLARGMARLV VIDSVAAPFR CEFDGAALAL RAQRLLALGA ELRRLSCAFR 351 400 ENSTTRP00000006115/1-341 XXXXXXXXXX X--------- -----XXXXX XXXXXXXXVG ---------- ENSP00000451974/1-346 SPVLCINQV- ---------- -----TEAME EQGAAHGPLG ---------- bmy_05899T0/1-522 SPVLCVNQVG PPPPPGRARP GGPGGGRVLT AADPDLDPPG DGIRGGAGCS ENSBTAP00000013145/1-341 SPVLCVNQV- ---------- -----TEAVE EQDLVAGPPG ---------- 401 450 ENSTTRP00000006115/1-341 ---------- ---------- ---------- -----GERAS PALGITWSNQ ENSP00000451974/1-346 ---------- ---------- ---------- ---FWDERVS PALGITWANQ bmy_05899T0/1-522 SWAPGVSGAP EGRGGGTRGS THSTGQSAVF CLSVVGERVS PALGITWSNQ ENSBTAP00000013145/1-341 ---------- ---------- ---------- --------MS PALGITWANQ 451 500 ENSTTRP00000006115/1-341 LLVRLMADRL RPEEAASARP A-TLRVLSAP HLPPSSCSYT VTAEGVRG-- ENSP00000451974/1-346 LLVRLLADRL REEEAALGCP ARTLRVLSAP HLPPSSCSYT ISAEGVRG-- bmy_05899T0/1-522 LLVRLMADRQ RPEEAASAPP RRTLRVVSAP HLPPSSCSYT VTAEGVRGRL ENSBTAP00000013145/1-341 LLVRLLADRQ RPEEAPLTPP GRTLRVVFAP HLPASSCSYT IAAEGVRG-- 501 550 ENSTTRP00000006115/1-341 ---------- -------TPG TESC---- ENSP00000451974/1-346 ---------- -------TPG TQSH---- bmy_05899T0/1-522 EPSPADMSPS PWLGSPHVPG AAGSAQHP ENSBTAP00000013145/1-341 ---------- -------MPG TACS----