KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:16 2014 Check: 00 .. Name: ENSP00000225831/1-99 Len: 116 Check: 7984 Weight: 1.00 Name: ENSBTAP00000013146/1-99 Len: 116 Check: 9401 Weight: 1.00 Name: ENSTTRP00000013734/1-99 Len: 116 Check: 9238 Weight: 1.00 Name: bmy_15034T0/1-116 Len: 116 Check: 4877 Weight: 1.00 Name: BACU013942/1-99 Len: 116 Check: 9924 Weight: 1.00 // 1 50 ENSP00000225831/1-99 MKVSAALLCL LLIAATFIPQ GLAQ------ ---------- -PDAINAPVT ENSBTAP00000013146/1-99 MKVSAALLCL LLTVAAFSTE VLAQ------ ---------- -PDAINSQVA ENSTTRP00000013734/1-99 MKVSAALLCL LLTTAAFSTQ VLAQ------ ---------- -PDAINSPVT bmy_15034T0/1-116 MKVSAALLCL LLTAAAFSTQ VLAQPERTYS ILKCFFFVVL FPDAINSPVT BACU013942/1-99 MKASAALLCL LLTAAAFSTQ VLAQ------ ---------- -PDAINSPVT 51 100 ENSP00000225831/1-99 CCYNFTNRKI SVQRLASYRR ITSSKCPKEA VIFKTIVAKE ICADPKQKWV ENSBTAP00000013146/1-99 CCYTFNSKKI SMQRLMNYRR VTSSKCPKEA VIFKTILGKE LCADPKQKWV ENSTTRP00000013734/1-99 CCYTFANKKI SNQRLMSYRR VTSSKCPKEA VIFKTILGKD ICADPKQKWV bmy_15034T0/1-116 CCYTLTNKKI STQRLMSYRR VTSSKCPKEA VIFKTILGKE ICADPKQKWV BACU013942/1-99 CCYTLTHKKI STQRLMSYRR VTSSKCPKEA VIFKTILGKE ICADPKQKWV 101 150 ENSP00000225831/1-99 QDSMDHLDKQ TQTPKT ENSBTAP00000013146/1-99 QDSINYLNKK NQTPKP ENSTTRP00000013734/1-99 QDSMRHLDKK RQTPKP bmy_15034T0/1-116 QDSMRHLDKT RQTPKP BACU013942/1-99 QDSMRHLDKK RQTPKP