KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:16 2014 Check: 00 .. Name: BACU005793/1-310 Len: 365 Check: 2374 Weight: 1.00 Name: bmy_02719T0/1-267 Len: 365 Check: 659 Weight: 1.00 Name: ENSP00000457723/1-305 Len: 365 Check: 3626 Weight: 1.00 Name: ENSTTRP00000007784/1-305 Len: 365 Check: 3626 Weight: 1.00 Name: ENSBTAP00000013151/1-305 Len: 365 Check: 2343 Weight: 1.00 // 1 50 BACU005793/1-310 ---------- ---------- ---------- ---------- ---------M bmy_02719T0/1-267 MDLSGVKKKS LLGVKENNKK SSTRAPSPTK RKDRSDEKSK DRSKDKGANK ENSP00000457723/1-305 MDLSGVKKKS LLGVKENNKK SSTRAPSPTK RKDRSDEKSK DRSKDKGATK ENSTTRP00000007784/1-305 MDLSGVKKKS LLGVKENNKK SSTRAPSPTK RKDRSDEKSK DRSKDKGATK ENSBTAP00000013151/1-305 MDLSGVKKKS LLGVKENNKK SSTRAPSPTK RKDRSDEKSK DRSKDKGATK 51 100 BACU005793/1-310 EKAEGEHGEL RRKKTKRVNA ------AQTL LDRQLGLKHQ HGLQQRLQLI bmy_02719T0/1-267 ESSEKDRGRD KTRKRRSASS GSSSTRSRSS STSSSGSSTS TGSSSGSSSS ENSP00000457723/1-305 ESSEKDRGRD KTRKRRSASS GSSSTRSRSS STSSSGSSTS TGSSSGSSSS ENSTTRP00000007784/1-305 ESSEKDRGRD KTRKRRSASS GSSSTRSRSS STSSSGSSTS TGSSSGSSSS ENSBTAP00000013151/1-305 ESSEKDRGRD KTRKRRSASS GSSSTRSRSS STSSSGSSTS TGSSSGSSSS 101 150 BACU005793/1-310 FSIDRSGSSS TSRSSSFGSS PGSPSPSRRR QDNRRCSRSK SKPPRRNEKE bmy_02719T0/1-267 SASSRSGSSS TSRSSSSSSS SGSPSPSRRR HDNRRRSRSK SKPPKRDEKE ENSP00000457723/1-305 SASSRSGSSS TSRSSSSSSS SGSPSPSRRR HDNRRRSRSK SKPPKRDEKE ENSTTRP00000007784/1-305 SASSRSGSSS TSRSSSSSSS SGSPSPSRRR HDNRRRSRSK SKPPKRDEKE ENSBTAP00000013151/1-305 SASSRSGSSS TSRSSSSSSS SGSPSPSRRR HDNRRRSRSK SKPPKRDEKE 151 200 BACU005793/1-310 RKRRSASPKP TTVHVGRLTR NVTNDHIMEI FSTYGKIKMI DVLVERMHLH bmy_02719T0/1-267 RKRRSPSPKP TKVHIGRLTR NVTKDHIMEI FSTYGKIKMI DMPVERMHPH ENSP00000457723/1-305 RKRRSPSPKP TKVHIGRLTR NVTKDHIMEI FSTYGKIKMI DMPVERMHPH ENSTTRP00000007784/1-305 RKRRSPSPKP TKVHIGRLTR NVTKDHIMEI FSTYGKIKMI DMPVERMHPH ENSBTAP00000013151/1-305 RKRRSPSPKP TKVHIGRLTR NVTKDHIMEI FSTYGKIKMI DMPVERMHPH 201 250 BACU005793/1-310 LSKGYANVEF ENPDEAEKAL KHVDGGHMDG QEITATAVLA PWPQPPPQEI bmy_02719T0/1-267 LSKGYAYVEF ENPDEAEKAL KHMDGGHV-- ---------- PLGADPPCAG ENSP00000457723/1-305 LSKGYAYVEF ENPDEAEKAL KHMDGGQIDG QEITATAVLA PWPRPPPRRF ENSTTRP00000007784/1-305 LSKGYAYVEF ENPDEAEKAL KHMDGGQIDG QEITATAVLA PWPRPPPRRF ENSBTAP00000013151/1-305 LSKGYAYVEF ENPDEAEKAL KHMDGGQIDG QEITATAVLA PWPRPPPRRF 251 300 BACU005793/1-310 QPSQENAATA SHVAQVTPTD EEKVTFPLTQ VSRAPAPQEP LQLQLLTISR bmy_02719T0/1-267 DP-------A PLAAAATGA- ---------- ---APAPTPP ---------- ENSP00000457723/1-305 SPPRRMLPPP PMWRRSPPR- -------MRR RSRSPRRRSP VRRR------ ENSTTRP00000007784/1-305 SPPRRMLPPP PMWRRSPPR- -------MRR RSRSPRRRSP VRRR------ ENSBTAP00000013151/1-305 SPPRRMLPPL PMWRRSPPR- -------MRR RSRSPRRRSP ARRR------ 301 350 BACU005793/1-310 ATEALPCDLY PIQFTFVTFL AEGGSVGKKS LTQRQASEVK TVIATFPLAA bmy_02719T0/1-267 ---------- ---------- ------DKQG HRSSAL---- ---------- ENSP00000457723/1-305 ---------- ---------- --SRSPGRRR HRSRSSSNSS R--------- ENSTTRP00000007784/1-305 ---------- ---------- --SRSPGRRR HRSRSSSNSS R--------- ENSBTAP00000013151/1-305 ---------- ---------- --SRSPGRRR HRSRSSSNSS R--------- 351 400 BACU005793/1-310 EFRLPECCWF GESRL bmy_02719T0/1-267 ---------- ----- ENSP00000457723/1-305 ---------- ----- ENSTTRP00000007784/1-305 ---------- ----- ENSBTAP00000013151/1-305 ---------- -----