KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:16 2014 Check: 00 .. Name: ENSTTRP00000009376/1-371 Len: 444 Check: 1127 Weight: 1.00 Name: BACU016625/1-253 Len: 444 Check: 9664 Weight: 1.00 Name: bmy_02664T0/1-343 Len: 444 Check: 479 Weight: 1.00 Name: ENSP00000251203/1-374 Len: 444 Check: 9657 Weight: 1.00 Name: ENSBTAP00000013152/1-382 Len: 444 Check: 408 Weight: 1.00 // 1 50 ENSTTRP00000009376/1-371 MDTP--PPRP APPPRPPL-- ------GSDT DDVL-QIMAI TDQSLDEAQA BACU016625/1-253 ---------- ---------- ---------- ---------- ---------- bmy_02664T0/1-343 ---------- ---------- ---------- ---------- ---------- ENSP00000251203/1-374 -MAA--PPRP APSPPAPR-- ------RLDT SDVLQQIMAI TDQSLDEAQA ENSBTAP00000013152/1-382 MDAPQRPPRP APPPPAPRRS PPGPPPGSNT GDVLQQIMAI TDQSLDEAQA 51 100 ENSTTRP00000009376/1-371 RKHALNCHQM KPALFSVPCE IKEKAGLNIR GILAEGPPDA QLQKLDNMLL BACU016625/1-253 ---------- ---------- ---------- ----MEPRDS LL-------- bmy_02664T0/1-343 ---------- -----TLIQS LLSYPGLNIR GIPEEGPPDA QLLKLDNMLL ENSP00000251203/1-374 RKHALNCHRM KPALFSVLCE IKEKTVVSIR GIQDEDPPDA QLLRLDNMLL ENSBTAP00000013152/1-382 RKHALNCHRM KPALFSVLCE IKEKTVSSIH GIQEVGPPDA QLLRLDNMLL 101 150 ENSTTRP00000009376/1-371 AEGMCRPEKH RRGAQAA-AG TATPGGCPND SGPEHSDSRA KLSQTRQIYP BACU016625/1-253 ---------- --GSHRL-AF VSPP------ ---------- ---------- bmy_02664T0/1-343 AEGMCRPEKQ GRGAQAA-AG TATPGGCPND NGLEHSDYRA KLSQIRQIYH ENSP00000251203/1-374 AEGVCRPEKR GRGGAVARAG TATPGGCPND NSIEHSDYRA KLSQIRQIYH ENSBTAP00000013152/1-382 AEGVSRPEKQ GRGASAA-AN AAMPGGRPND SGLEHSDYRA KLSQIRQMYH 151 200 ENSTTRP00000009376/1-371 SELEKHEQXX XXXXXXXXXX XXXXXXXXXX XPKEIEHVVG ILHGKFNSVL BACU016625/1-253 -------QAC REFTTHVTSL PREQSRMRPV SPKEVEHVLG ILHGKFNSVQ bmy_02664T0/1-343 SELEKYEQAC REFTTHVTDL LREHSRIRPV SPKEIEHVLG ILHGKFNSVQ ENSP00000251203/1-374 SELEKYEQAC REFTTHVTNL LQEQSRMRPV SPKEIERMVG AIHGKFSAIQ ENSBTAP00000013152/1-382 SELEKYEQAC REFTMHVTNL LQEQSRIRPV SPAEIEHMVG VIHGKFQSIQ 201 250 ENSTTRP00000009376/1-371 MQLKESTCEA VMTLRSRVLD ARRKRQNFGK QATEVLNEYF YSHVSNPYPS BACU016625/1-253 MQLKQSTCEA VVTLRSRFLD ARRKRQDFSR QATEVLNEYF YSHLNYPYPS bmy_02664T0/1-343 IQLKQSTCEA VMTLRSRFLD ARRKRQDFSK QATEVLNEYF YSHLNNPYPS ENSP00000251203/1-374 MQLKQSTCEA VMTLRSRLLD ARRKRRNFSK QATEVLNEYF YSHLNNPYPS ENSBTAP00000013152/1-382 MQLKQSTCEA VMALRARFLD ARRKRQNFSK QATEVLNEYF YSHLSNPYPS 251 300 ENSTTRP00000009376/1-371 EETKEELARK GGITVSQVSN WFSNKRIRYK KNMGKFQEKA TTYTGKMAED BACU016625/1-253 EEAKEELARK GGIMVSQVSN SFGNKRIRYK KNMGKFQKEA TIYTG----- bmy_02664T0/1-343 EEAKEELARK GGITVSQVSN SFGNKRIRYK KNMGKFQEEA TIYTGKMSED ENSP00000251203/1-374 EEAKEELARK GGLTISQVSN WFGNKRIRYK KNMGKFQEEA TIYTGKTAVD ENSBTAP00000013152/1-382 EEAKEELARR GGITVSQVSN WFGNKRIRYK KNMRKFQEEA TIYTAKTAVD 301 350 ENSTTRP00000009376/1-371 TTNVRGPGSQ ASCPLRPSSS ---------- ---------- ------SFGP BACU016625/1-253 ---------- ---------- ---------- ---------- ------SSGP bmy_02664T0/1-343 TTDVRGPGSQ ASCPLRPSSS HDYPGEVNTS RQAGQVLWGQ KVPTKSSSGP ENSP00000251203/1-374 TTEVGVPGNH ASCLSTPSSG ---------- ---------- ------SSGP ENSBTAP00000013152/1-382 ATEVRGSGRQ ASPPSMSHSS ---------- ---------- ------SSGP 351 400 ENSTTRP00000009376/1-371 FPMTSTSDTL ITLQTLASLR PAPGEGSLLG QARGGWQ--V RRMSTASPIG BACU016625/1-253 FPMPSTSDTL ITLQTLASLR PAPGEGSLLG QARGGWQ--V RRMSTTSPIG bmy_02664T0/1-343 FPMTSTSDTL ITLKTLASLR PAPREGSLLG QARGGWQ--V RQMSTTSPIG ENSP00000251203/1-374 FPLPSAGDAF LTLRTLASLQ PPPGGGCLQS QAQGSWQGAT PQPATASPAG ENSBTAP00000013152/1-382 FPLTGPGDAL IRLQTLACVQ PSPRGGGLLA QARGGWQ--V KQMPTASPVG 401 450 ENSTTRP00000009376/1-371 DPGRVTSNAS N--------- ---------- ---------- ---- BACU016625/1-253 DPGSVTSDAS KCWDEQKRGR CDLPWFPGIH VTSENPELTA DSAP bmy_02664T0/1-343 DPGSVTSDAS N--------- ---------- ---------- ---- ENSP00000251203/1-374 DPGSINSSTS N--------- ---------- ---------- ---- ENSBTAP00000013152/1-382 NPGSVTSDAS N--------- ---------- ---------- ----