KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:17 2014 Check: 00 .. Name: ENSP00000243786/1-366 Len: 417 Check: 7076 Weight: 1.00 Name: bmy_13393T0/1-318 Len: 417 Check: 7489 Weight: 1.00 Name: ENSBTAP00000013154/1-360 Len: 417 Check: 9617 Weight: 1.00 Name: BACU012732/1-415 Len: 417 Check: 514 Weight: 1.00 Name: ENSTTRP00000011103/1-364 Len: 417 Check: 1552 Weight: 1.00 // 1 50 ENSP00000243786/1-366 MVLHLLLFLL LTPQGGHSCQ GLELARELVL AKVRALFLDA LGPPAVTREG bmy_13393T0/1-318 ---------- MSPR------ -PSFSR---- -------LQM SGSHIPPAEE ENSBTAP00000013154/1-360 -MWLQLLLLL LAPQGGHGCH GLELDRELVL AKVRALFLDA LGPPPVTGEG BACU012732/1-415 -MWPQLLLLL LAPRGGHGCH GPELDRELVL AKVRALFLDA LGAPAVTGEG ENSTTRP00000011103/1-364 -MWPQLLLLL LAPRGGHGCH GPELDRELVL AKVRALFLDA LGAPAVTGED 51 100 ENSP00000243786/1-366 GDPGVRRLPR RHALGGFTHR GSEPEEEEDV SQAILFPATD ASCEDKSAAR bmy_13393T0/1-318 ESP------- -----GFCQS G--------L LSAFPLPPTG ASLGDEPAAG ENSBTAP00000013154/1-360 GDPGVRRLHR RHAVGGFMRR GSEP-EDQDV SQAILFPAAG ASCGDEPDAG BACU012732/1-415 GNPGVRRLPR RHAVRGFTSR ASEP-EEEDV SQAILFPVTG ASLGDEPAAG ENSTTRP00000011103/1-364 GNPGVRRLPR RHAVRGFMRR GSEP-EEEDV SQAILFPATG ARLGDKPAAG 101 150 ENSP00000243786/1-366 GLAQEAEEGL FRYMFRPSQH TRSRQVTSAQ LWFHTGLDRQ GTAASNSSEP bmy_13393T0/1-318 ELAQEAKEGL FTYVFRPSQH TRSRQVTSAQ LWFHTGLDRQ ETAAANSSGP ENSBTAP00000013154/1-360 ----EAEEGL FTYVFQPSQH TRSRQVTSAQ LWFHTGLDRQ ETAAANSSEP BACU012732/1-415 ELAQEAKEGL FTYVFRPSQH TRSRQVTSAQ LWFYTGLDRQ ETAAANSSGP ENSTTRP00000011103/1-364 ELAQEAKEGL FTYVFRPSQH TRSRQVTSAQ LWFHTGLDRQ ETAAANSSGP 151 200 ENSP00000243786/1-366 LLGLLALSPG GPVAVPMSLG HAPPHWAVLH LATSALSLLT HPVLVLLLRC bmy_13393T0/1-318 LLGLLALSSG GPTAVPMSLG QAPPRWAVLH LAASAFPLLT HPVLVLLLHC ENSBTAP00000013154/1-360 LLGLLVLTSG GPMPVPMSLG QAPPRWAVLH LATSAFPLLT HPVLALLLRC BACU012732/1-415 LLGLLALSSG GPAAVPMSLG QAPPRWAVLH LAASAFPLLT HPVLVLLLHC ENSTTRP00000011103/1-364 LLGLLALSSG GPTAVPISLG QAPPRWAVLH LAASAFPLLT HPVLVLLLHC 201 250 ENSP00000243786/1-366 PLCTCSARPE ATPFLVAHTR TRP------- ---------- ---------- bmy_13393T0/1-318 PLCSCSARPE ATPFLVAHTR ARP------- ---------- ---------- ENSBTAP00000013154/1-360 PLCSCSTRPE ATPFLVAHTR AKP------- ---------- ---------- BACU012732/1-415 PLCSCSARPE ATPFLVPHTR ARPXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000011103/1-364 PLCSCSARPE ATPFLVAHTR ARP------- ---------- ---------- 251 300 ENSP00000243786/1-366 ---------- ---------- ----PSGGER ARRSTPLMSW PWSPSALRLL bmy_13393T0/1-318 ---------- ---------- ----PRGGER ARRSTPPLPW PWSPAALRLL ENSBTAP00000013154/1-360 ---------- ---------- ----PSGGER ARRSTPPLPW PWSPAALRLL BACU012732/1-415 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XRRSTPPLPW PWSPAALRLL ENSTTRP00000011103/1-364 ---------- ---------- ----PSGGER ARRSTPPLPW PWSPAALRLL 301 350 ENSP00000243786/1-366 QRPPEEPAAH ANCHRVALNI SFQELGWERW IVYPPSFIFH YCHGGCGLHI bmy_13393T0/1-318 QRPPEEPAAH ADCHRAALNI SFQELGWERW IVHPPSFIFH YCHGGCGLST ENSBTAP00000013154/1-360 QRPPEEPAAH ADCHRAALNI SFQELGWDRW IVHPPSFIFY YCHGGCGLSP BACU012732/1-415 QRPPEDPAAH ADCHRAALNI SFQELGWEWW IVHPPSFIFH YCHGGCGLST ENSTTRP00000011103/1-364 QRPPEDPAAH ADCHRAALNI SFQELGWERW IVHPPSFTFH YCHGGCGLST 351 400 ENSP00000243786/1-366 PPNLSLPVPG APPTPAQPYS LLPGAQPCCA ALPGTMRPLH VRTTSDGGYS bmy_13393T0/1-318 PPDLSLPVPG APPTPVQPLS LVPGAQPCCA ALPGTMRPLR VRTTSDGGFS ENSBTAP00000013154/1-360 PQDLPLPVPG VPPTPVQPLS LVPGAQPCCA ALPGTMRPLH VRTTSDGGYS BACU012732/1-415 PPDLSLPVPG APPTPVQPLS LVPGAQPCCA ALPGTMRPLR VRTTSDGGYS ENSTTRP00000011103/1-364 PPDLSLPVPG APPTPVQPLS LVPGAQPCCA ALPGTMRPLR VRTTSDGGYS 401 450 ENSP00000243786/1-366 FKYETVPNLL TQHCACI bmy_13393T0/1-318 FKYETVPNLL TQHCACI ENSBTAP00000013154/1-360 FKYEMVPNLL TQHCACI BACU012732/1-415 FKYETVPNLL TQHCACI ENSTTRP00000011103/1-364 FKYEMVPNLL TQHCACI