KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:21 2014 Check: 00 .. Name: ENSTTRP00000001717/1-465 Len: 613 Check: 2209 Weight: 1.00 Name: ENSP00000357065/1-613 Len: 613 Check: 1726 Weight: 1.00 Name: ENSBTAP00000013165/1-610 Len: 613 Check: 5665 Weight: 1.00 Name: bmy_06309T0/1-439 Len: 613 Check: 6221 Weight: 1.00 Name: BACU003881/1-609 Len: 613 Check: 4495 Weight: 1.00 // 1 50 ENSTTRP00000001717/1-465 ---------- ---------- ---------- ---------- ---------- ENSP00000357065/1-613 MGALRPTLLP PSLPLLLLLM LGMGCWAREV LVPEGPLYRV AGTAVSISCN ENSBTAP00000013165/1-610 MGALGPKLPP PP---LLLLM LGIGCCAREV LVPQGPLYRV AGTAISISCN bmy_06309T0/1-439 ---------- ---------- ---------- ---------- ---------- BACU003881/1-609 MGALGPQ-PP PP---LLLLI LGVGCCAREV LVPEGPLYRV AGTAISISCN 51 100 ENSTTRP00000001717/1-465 ---------- ---------- ---------- ---------- ---------- ENSP00000357065/1-613 VTGYEGPAQQ NFEWFLYRPE APDTALGIVS TKDTQFSYAV FKSRVVAGEV ENSBTAP00000013165/1-610 VSGYEGSAQQ DFEWFLYRPE APEAALGIVS TRDPRFSYAI FGPRVAAGEV bmy_06309T0/1-439 ---------- ---------- ---------- ---------- ---------- BACU003881/1-609 VTGYEGPAQQ DFEWFLYRPE APEAALGIVS TRDTRFSYAV FGPRVAAGEV 101 150 ENSTTRP00000001717/1-465 ---------- ---------- ---------- ---------- --------LP ENSP00000357065/1-613 QVQRLQGDAV VLKIARLQAQ DAGIYECHTP STDTRYLGSY SGKVELRVLP ENSBTAP00000013165/1-610 QVQRLQGDAA VLRISRLQAQ DAGIYECYTP STDARYLGSY SGKVELRVLP bmy_06309T0/1-439 ---------- ---------- ---------- ---------- ---------- BACU003881/1-609 QVQRLQGDAV VLKIARLQAQ DAGIYECYTP STDAQYLGSY SGKVELRVLP 151 200 ENSTTRP00000001717/1-465 DMLQVSAAPP GPRGRQAPAS PPRLMVHEGQ ELALGCLART STEKHTHLAV ENSP00000357065/1-613 DVLQVSAAPP GPRGRQAPTS PPRMTVHEGQ ELALGCLART STQKHTHLAV ENSBTAP00000013165/1-610 DTLQVSASPP GPRGRQAPTS PPRLTVHEGQ ELALGCLART STQKHTHLAV bmy_06309T0/1-439 ---------- ---------- ----MVHEGQ ELALGCLART STQKHTHLAV BACU003881/1-609 DMLQVSATPP GPRGRQAPTS PPRLMVHEGQ ELALGCLART STQKHTHLAV 201 250 ENSTTRP00000001717/1-465 SFGRAVPEAP VGRATLQEVV GLRPDMAVEA GAPYAERLAA GELRLGKEGT ENSP00000357065/1-613 SFGRSVPEAP VGRSTLQEVV GIRSDLAVEA GAPYAERLAA GELRLGKEGT ENSBTAP00000013165/1-610 SFGRAVPEAP VGRATLQEVV GLRPDLAVDA GAPYAARLAA GELRLGKEGP bmy_06309T0/1-439 SFGRAVPEVP VGRATLQEVV GLRPDLAVEA GAPYAERLAA GELRLGKEGT BACU003881/1-609 SFGRAVPEAP VGRTTLQEVV GLRPDLAVEA GAPYAERLAA GELRLGKEGT 251 300 ENSTTRP00000001717/1-465 ERYRMVVGGA QADDAGTYHC TAAEWIQDPD GSWAQIAEKR AVLAHVDVQT ENSP00000357065/1-613 DRYRMVVGGA QAGDAGTYHC TAAEWIQDPD GSWAQIAEKR AVLAHVDVQT ENSBTAP00000013165/1-610 ERYRMVLGGA QADDAGTYHC TATEWIQDPD GSWAQIAEKR AVLAHVDVQT bmy_06309T0/1-439 ERYRMVVGGA QADDAGTYHC TAAEWIQDPD GSWAQIAEKR AVLAHVDVQT BACU003881/1-609 ERYRMVVGGA QADDAGTYHC TAAEWIQDPD GSWAQIAEKR AVLAHVDVQT 301 350 ENSTTRP00000001717/1-465 LSSQLAVTVG PGERRIGPGE PLELLCNVSG ALPPTGRHAA YSVGWEMAPA ENSP00000357065/1-613 LSSQLAVTVG PGERRIGPGE PLELLCNVSG ALPPAGRHAA YSVGWEMAPA ENSBTAP00000013165/1-610 LSSQLAVTVG PGERRVGPGE PLELLCNVSG ALPPPGRHAA YSVGWEMAPA bmy_06309T0/1-439 LSSQLAVTVG PGERRIGPGE PLELLCNVSG ALPPPGRHAA YSVGWEMAPA BACU003881/1-609 LSSQLAVTVG PGERRIGPGE PLELLCNVSG ALPPPGRHAA YSVGWEMAPA 351 400 ENSTTRP00000001717/1-465 GAPGPGRLVA QLDTEGVGSL GPGYEGRHIA XXXXXXXXXX XXXXXXXXXX ENSP00000357065/1-613 GAPGPGRLVA QLDTEGVGSL GPGYEGRHIA MEKVASRTYR LRLEAARPGD ENSBTAP00000013165/1-610 GAPGPGRLVA QLDTEGVGSL GPGYEGRHIA MEKVASRTYR LRLEAARPAD bmy_06309T0/1-439 GAPGPGRLVA QLDTEGVGSL GPGYEGRHIA MEKVASRTYR LRLEAARPGD BACU003881/1-609 GAPGPGRLVA QLDTEGVGSL GPGYEGRHIA MEKVASRTYR LRLEAARPGD 401 450 ENSTTRP00000001717/1-465 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357065/1-613 AGTYRCLAKA YVRGSGTRLR EAASARSRPL PVHVREEGVV LEAVAWLAGG ENSBTAP00000013165/1-610 AGTYRCLAKA YVRGSGARLR EAASARSRPL PVHVREEGVV LEAVAWLAGG bmy_06309T0/1-439 AGTYRCLAKA YVRGSGARLR EAASARSRPL PVHVREEGVV LEAVAWLVGG BACU003881/1-609 AGTYRCLAKA YVRGSGARLR EAASARSRPL PVHVREEGVV LEAVAWLVGG 451 500 ENSTTRP00000001717/1-465 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357065/1-613 TVYRGETASL LCNISVRGGP PGLRLAASWW VERPEDGELS SVPAQLVGGV ENSBTAP00000013165/1-610 AVYRGETASL LCNISVRGGP PGLRLAASWW VERPEEGELS SAPAQLVGGV bmy_06309T0/1-439 TVYRGETASL LCNISVRGGP PGLRLAASWW VERPEEGELS SAPAQLVGGV BACU003881/1-609 TVYRGETASL LCNISVRGGP PGLRLAASWW VERPEEGELS SAPAQLVGGV 501 550 ENSTTRP00000001717/1-465 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357065/1-613 GQDGVAELGV RPGGGPVSVE LVGPRSHRLR LHSLGPEDEG VYHCAPSAWV ENSBTAP00000013165/1-610 GQDGVAELGV RPGGGPVSVE LVGPRSHRLR LHGLGPEDEG VYHCAPSAWV bmy_06309T0/1-439 GQDGVAELGV RPGGGPISVE LVGPRSHRLR LHGLGPEDEG VYHCAPSAWV BACU003881/1-609 GQDGVAELGV RPGGSPISVE LVGPRSHRLR LHSLGPEDEG VYHCAPSAWV 551 600 ENSTTRP00000001717/1-465 XXXXXXXXXX XXXXXXXXXX XXXXXXLDTL FVPLLVGAGL ALAIGATILG ENSP00000357065/1-613 QHADYSWYQA GSARSGPVTV YPYMHALDTL FVPLLVGTGV ALVTGATVLG ENSBTAP00000013165/1-610 QHADYSWYQA GSARSGPVTV YPYTHALDTL FVPLLVGTGV ALVIGATILG bmy_06309T0/1-439 QHADYSWYQA GSARSGPVTV YPYXHALDTL FVPLLVGAGV ALAIGATILG BACU003881/1-609 QHADYSWYQA GSARSGPVTV YPYTHALDTL VVPLLVGAGV ALAIGATVLG 601 650 ENSTTRP00000001717/1-465 SITCCFMKRL QKR ENSP00000357065/1-613 TITCCFMKRL RKR ENSBTAP00000013165/1-610 SITCCFMKRL RKR bmy_06309T0/1-439 SITCCFMKRL RKR BACU003881/1-609 SITCCFMKRL RKR