KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:23 2014 Check: 00 .. Name: bmy_19806T0/1-451 Len: 463 Check: 9203 Weight: 1.00 Name: ENSTTRP00000001924/1-387 Len: 463 Check: 3590 Weight: 1.00 Name: ENSBTAP00000013170/1-385 Len: 463 Check: 3613 Weight: 1.00 Name: ENSP00000263121/1-385 Len: 463 Check: 3993 Weight: 1.00 Name: BACU017147/1-376 Len: 463 Check: 5143 Weight: 1.00 // 1 50 bmy_19806T0/1-451 SAAAVEEPGG GASTRPGSAS PSPPASASLG SGRPGPASAL LTLAPRPWPP ENSTTRP00000001924/1-387 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013170/1-385 ---------- ---------- ---------- ---------- ---------- ENSP00000263121/1-385 ---------- ---------- ---------- ---------- ---------- BACU017147/1-376 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_19806T0/1-451 DSAAAMMMMA LSKTFGQKPV KFQLEDDGEF YMIGSEVGNY LRMFRGSLYK ENSTTRP00000001924/1-387 -----MMMMA LSKTFGQKPV KFQLEDDGEF YMIGSEVGNY L-MFRGSLYK ENSBTAP00000013170/1-385 -----MMMMA LSKTFGQKPV KFQLEDDGEF YMIGSEVGNY LRMFRGSLYK ENSP00000263121/1-385 -----MMMMA LSKTFGQKPV KFQLEDDGEF YMIGSEVGNY LRMFRGSLYK BACU017147/1-376 -----MMMMA LSKTFGQKPV KFQLEDDGEF YMIGSEVGNY LRMFRGSLYK 101 150 bmy_19806T0/1-451 RYPSLWRRLA TVEERKKIVA SSHGKKTKPN TKDHGYTTLA TSVTLLKASE ENSTTRP00000001924/1-387 RYPSLWRRLA TVEERKKIVA SSH------- --DHGYTTLA TSVTLLKASE ENSBTAP00000013170/1-385 RYPSLWRRLA TVEERKKIVA SSHGKKTKPN AKDHGYTTLA TSVTLLKASE ENSP00000263121/1-385 RYPSLWRRLA TVEERKKIVA SSHGKKTKPN TKDHGYTTLA TSVTLLKASE BACU017147/1-376 RYPSLWRRLA TVEERKKIVA SSH------- --DHGYTTLA TSVTLLKASE 151 200 bmy_19806T0/1-451 VEEILDGNDE KYKAVSISTE PPTYLREQKA KRNSQWVPTL PNSSHHLDAV ENSTTRP00000001924/1-387 VEEILDGNDE KYKAVSISTE PPTYLREQKA KRNSQWVPTL PNSSHHLDAV ENSBTAP00000013170/1-385 VEEILDGNDE KYKAVSISTE PPTYLREQKA KRNSQWVPTL PNSSHHLDAV ENSP00000263121/1-385 VEEILDGNDE KYKAVSISTE PPTYLREQKA KRNSQWVPTL PNSSHHLDAV BACU017147/1-376 VEEILDGNDE KYKAVSISTE PPTYLREQKA KRNSQWVPTL PNSSHHLDAV 201 250 bmy_19806T0/1-451 PCSTTINRNR MGRDKKRTFP ---------- --LCFDDHDP AVIHENASQP ENSTTRP00000001924/1-387 PCSTTINRNR MGRDKKRTFP LWVGLASDST EVLHFDDHDP AVIHENASQP ENSBTAP00000013170/1-385 PCSTTINRNR MGRDKKRTFP ---------- --LCFDDHDP AVIHENASQP ENSP00000263121/1-385 PCSTTINRNR MGRDKKRTFP ---------- --LCFDDHDP AVIHENASQP BACU017147/1-376 PCSTTINRNR MGRDKKRTFP ---------- --LCFDDHDP AVIHENASQP 251 300 bmy_19806T0/1-451 EVLVPIRLDM EIDGQKLRDA FTWNMNEKLM TPEMFSEILC DDLDLNPLTF ENSTTRP00000001924/1-387 EVLVPIRLDM EIDGQKLRDA FTWNMNEKLM TPEMFSEILC DDLDLNPLTF ENSBTAP00000013170/1-385 EVLVPIRLDM EIDGQKLRDA FTWNMNEKLM TPEMFSEILC DDLDLNPLTF ENSP00000263121/1-385 EVLVPIRLDM EIDGQKLRDA FTWNMNEKLM TPEMFSEILC DDLDLNPLTF BACU017147/1-376 EVLVPIRLDM EIDGQKLRDA FTWNMNEKLM TPEMFSEILC DDLDLNPLTF 301 350 bmy_19806T0/1-451 VPAIASAIRQ QIESYPTDSI LEDQSDQRVI IKLNIHVGNI SLVDQFEWDM ENSTTRP00000001924/1-387 VPAIASAIRQ QIESYPTDSI LEDQSDQRVI IKLNIHVGNI SLVDQFEWDM ENSBTAP00000013170/1-385 VPAIASAIRQ QIESYPTDSI LEDQSDQRVI IKLNIHVGNI SLVDQFEWDM ENSP00000263121/1-385 VPAIASAIRQ QIESYPTDSI LEDQSDQRVI IKLNIHVGNI SLVDQFEWDM BACU017147/1-376 VPAIASAIRQ QIESYPTDSI LEDQSDQRVI IKLNIHVGNI SLVDQFEWDM 351 400 bmy_19806T0/1-451 SEKENSPEKF ALKLCSELGL GGEFVTTIAY SIRGQLSWHQ KTYAFSENPL ENSTTRP00000001924/1-387 SEKENSPEKF ALKLCSELGL GGEFVTTIAY SIRGQLSWHQ KTYAFSENPL ENSBTAP00000013170/1-385 SEKENSPEKF ALKLCSELGL GGEFVTTIAY SIRGQLSWHQ KTYAFSENPL ENSP00000263121/1-385 SEKENSPEKF ALKLCSELGL GGEFVTTIAY SIRGQLSWHQ KTYAFSENPL BACU017147/1-376 SEKENSPEKF ALKLCSELGL GGEFVTTIAY SIRGQLSWHQ KTYAFSENPL 401 450 bmy_19806T0/1-451 PTVEIAIRNT GDADQWCPLL ETLTDAEMEK KIRDQDRNTR CLPSPLSRQD ENSTTRP00000001924/1-387 PTVEIAIRNT GDADQWCPLL ETLTDAEMEK KIRDQDRNTR ---------- ENSBTAP00000013170/1-385 PTVEIAIRNT GDADQWCPLL ETLTDAEMEK KIRDQDRNTR ---------- ENSP00000263121/1-385 PTVEIAIRNT GDADQWCPLL ETLTDAEMEK KIRDQDRNTR ---------- BACU017147/1-376 PTVEIAIRNT GDADQWCPLL ETLTDAEMEK KIRDQDRNTR ---------- 451 500 bmy_19806T0/1-451 RTVTFSETQQ APG ENSTTRP00000001924/1-387 RMRRLANTAP AW- ENSBTAP00000013170/1-385 RMRRLANTAP AW- ENSP00000263121/1-385 RMRRLANTAP AW- BACU017147/1-376 RMRRLANTAP AW-