KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:49:25 2014 Check: 00 .. Name: bmy_07717T0/1-363 Len: 591 Check: 9780 Weight: 1.00 Name: ENSTTRP00000013236/1-557 Len: 591 Check: 8398 Weight: 1.00 Name: ENSP00000336729/1-558 Len: 591 Check: 6196 Weight: 1.00 Name: ENSBTAP00000013186/1-557 Len: 591 Check: 639 Weight: 1.00 // 1 50 bmy_07717T0/1-363 MGK------- ------PMGP KCGVWRRGSA ELLGEG---- ---------- ENSTTRP00000013236/1-557 MRKIRANAIA ILTVAWILGT FYYLWQDNRA HAASSGGRGA QRAGGRPEPL ENSP00000336729/1-558 MRKIRANAIA ILTVAWILGT FYYLWQDNRA HAASSGGRGA QRAGRRSEQL ENSBTAP00000013186/1-557 MRKIRANAIA ILTVAWILGT FYYLWQDNRA HAASSGGRGA KRAGGRPDQL 51 100 bmy_07717T0/1-363 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013236/1-557 REDRTIPLIX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000336729/1-558 REDRTIPLIV TGTPSKGFDE KAYLSAKQLK AGEDPYRQHA FNQLESDKLS ENSBTAP00000013186/1-557 REDRTIPLIV TGTPSRGFDE KAYLAAKQLK PGEDPYRQHA FNQLESDKLS 101 150 bmy_07717T0/1-363 ---------- MSCPSVSYSS DLPATSVIIT FHNEARSTLL RTVKSVLNRT ENSTTRP00000013236/1-557 XXXXXXXXXX XXCPSVSYSS DLPATSIIIT FHNEARSTLL RTVKSVLNRT ENSP00000336729/1-558 PDRPIRDTRH YSCPSVSYSS DLPATSVIIT FHNEARSTLL RTVKSVLNRT ENSBTAP00000013186/1-557 PDRPIRDTRH YSCPSVSYSS DLPATSVIIT FHNEARSTLL RTVKSVLNRT 151 200 bmy_07717T0/1-363 PASLIQEIIL VDDFSSDPED CLLLTRIPKV KCLRNDRREG LIRSRVRGAD ENSTTRP00000013236/1-557 PASLIQEIIL VDDFSSDPED CLLLTRITKV KCLRNDRREG LIRSRVRGAD ENSP00000336729/1-558 PANLIQEIIL VDDFSSDPED CLLLTRIPKV KCLRNDRREG LIRSRVRGAD ENSBTAP00000013186/1-557 PASLIQEIIL VDDFSSDPED CLLLTRIPKV KCLRNDRREG LIRSRVRGAD 201 250 bmy_07717T0/1-363 VATAAVLTFL DSHCEVNTEW LQPMLQRVKE DHTRVVSPII DVISLDNFAY ENSTTRP00000013236/1-557 VAAAAVLTFL DSHCEVNTEW LQPMLQRVKE DHTRVVSPII DVISLDNFAY ENSP00000336729/1-558 VAAATVLTFL DSHCEVNTEW LPPMLQRVKE DHTRVVSPII DVISLDNFAY ENSBTAP00000013186/1-557 VAAAAVLTFL DSHCEVNTEW LQPMLQRVKE DHTRVVSPII DVISLDNFAY 251 300 bmy_07717T0/1-363 LAASADLRGG GSGSQGRGSR PERKQWEQIP LEQKIARTDP TKPIRSALLW ENSTTRP00000013236/1-557 LAASADLRGG FDWSL----- --HFKWEQIP LEQKIARTDP TKPIRT---- ENSP00000336729/1-558 LAASADLRGG FDWSL----- --HFKWEQIP LEQKMTRTDP TRPIRT---- ENSBTAP00000013186/1-557 LAASADLRGG FDWSL----- --HFKWEQIP LEQKIARTDP TKPIRT---- 301 350 bmy_07717T0/1-363 ALQRPLPSLS QGLWRLLGGP FQMSGLLGVH DPRANSVLGP GEREARGQQA ENSTTRP00000013236/1-557 ------PVIA GGIFVIDKSW FN---HLGKY DAQMDI---- -----WGGEN ENSP00000336729/1-558 ------PVIA GGIFVIDKSW FN---HLGKY DAQMDI---- -----WGGEN ENSBTAP00000013186/1-557 ------PVIA GGIFVIDKSW FN---HLGKY DAQMDI---- -----WGGEN 351 400 bmy_07717T0/1-363 AQISDPSDSA SW---GLMEK QVNGQIANFK LCRRPGLSDC GTE----RNT ENSTTRP00000013236/1-557 FELS----FR VWMCGGSLEI VPCSRVGHVF RKRHPYNFPE GNALTYIRNT ENSP00000336729/1-558 FELS----FR VWMCGGSLEI VPCSRVGHVF RKRHPYNFPE GNALTYIRNT ENSBTAP00000013186/1-557 FELS----FR VWMCGGSLEI VPCSRVGHVF RKRHPYNFPE GNALTYIRNT 401 450 bmy_07717T0/1-363 KRTAEVWMDE YKQYYYEARP SAIGKAFGSV ATRIEQRRKM NCKSFRWYLD ENSTTRP00000013236/1-557 KRTAEVWMDE YKQYYYEARP SAIGKAFGSV ATRIEQRKKM NCKSFRWYLD ENSP00000336729/1-558 KRTAEVWMDE YKQYYYEARP SAIGKAFGSV ATRIEQRKKM NCKSFRWYLE ENSBTAP00000013186/1-557 KRTAEVWMDE FKQYYYEARP SAIGKAFGSV ATRIEQRKKM NCKSFRWYLD 451 500 bmy_07717T0/1-363 NVYPELT--- ---------- ---------- ---------- ---------- ENSTTRP00000013236/1-557 NVYPELTVPV KEVLPGIIKQ GANCLESQGQ DTAGNFLLSM GTCRGSAKSP ENSP00000336729/1-558 NVYPELTVPV KEALPGIIKQ GVNCLESQGQ NTAGDFLLGM GICRGSAKNP ENSBTAP00000013186/1-557 NVYPELTVPV KEVLPGIIKQ GTNCLESQGQ DTAGNFQLGM GICRGSAKNP 501 550 bmy_07717T0/1-363 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013236/1-557 PAAQAWLFSD HLIQQQGKCL AATSTSI-SP GSLVVLQACN PREGRQRWRR ENSP00000336729/1-558 QPAQAWLFSD HLIQQQGKCL AATSTLMSSP GSPVILQMCN PREGKQKWRR ENSBTAP00000013186/1-557 PAAQAWLFTD HLIQQQGKCL AATSTSV-SP GSLVVLQACN PREGRQRWRR 551 600 bmy_07717T0/1-363 ---------- ---------- ---------- ---------- - ENSTTRP00000013236/1-557 KASFIQHSVS GLCLEAKTTQ LVASKCQADV PAQQWQLLPH T ENSP00000336729/1-558 KGSFIQHSVS GLCLETKPAQ LVTSKCQADA QAQQWQLLPH T ENSBTAP00000013186/1-557 KASFIQHSVS GLCLEAKPAQ LVTSKCQADI PAQQWQLLPH T