KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:25 2014 Check: 00 .. Name: ENSBTAP00000013193/1-349 Len: 349 Check: 80 Weight: 1.00 Name: ENSP00000377218/1-349 Len: 349 Check: 9460 Weight: 1.00 Name: BACU007179/1-311 Len: 349 Check: 7465 Weight: 1.00 Name: bmy_00320T0/1-180 Len: 349 Check: 414 Weight: 1.00 Name: ENSTTRP00000008899/1-315 Len: 349 Check: 2903 Weight: 1.00 // 1 50 ENSBTAP00000013193/1-349 MPVERMRMRP WLEEQINSNM IPGLKWLSKE KKIFQIPWMH AARHGWDVEK ENSP00000377218/1-349 MPVERMRMRP WLEEQINSNT IPGLKWLNKE KKIFQIPWMH AARHGWDVEK BACU007179/1-311 ---------- ---------- ---------- --------MH AARHGWDVEK bmy_00320T0/1-180 MPVERMRMRP WLEEQINSNT IPGLKWLNKE KKIFQIPWMH AARHGWDVEK ENSTTRP00000008899/1-315 MPVERMRMRP WLEEQINSNT IPGLKWLNKE KKIFQIPWMH AARHGWDVEK 51 100 ENSBTAP00000013193/1-349 DAPLFRNWAI HTGKHQPGID KPDPKTWKAN FRCAMNSLPD IEEVKDKSIK ENSP00000377218/1-349 DAPLFRNWAI HTGKHQPGVD KPDPKTWKAN FRCAMNSLPD IEEVKDKSIK BACU007179/1-311 DAPLFRNWAI HTGKHQPGVD KPDPKTWKAN FRCAMNSLPD IEEVKDKSIK bmy_00320T0/1-180 DAPLFRNWAI HTGKHQPGVD KPDPKTWKAN FRCAMNSLPD IEEVKDKSIK ENSTTRP00000008899/1-315 DAPLFRNWAI HTGKHQPGVD KPDPKTWKAN FRCAMNSLPD IEEVKDKSIK 101 150 ENSBTAP00000013193/1-349 KGNNAFRVYR MLPMSERPSK KGKKPKTEKE DRVKHIKQEP IESPLGLSNG ENSP00000377218/1-349 KGNNAFRVYR MLPLSERPSK KGKKPKTEKE DKVKHIKQEP VESSLGLSNG BACU007179/1-311 KGNNAFRVYR MLPLSERPSK KGKKPKTEKE DRVKHIKQEP VESSLGLSNG bmy_00320T0/1-180 KGNNAFRVYR MLPLSERPSK KGKKPKTEKE DRVKHIKQEP VESSLGLSNG ENSTTRP00000008899/1-315 KGNNAFRVYR MLPLSERPSK KGKKPKTEKE DRVKHIKQEP VESSLGLSNG 151 200 ENSBTAP00000013193/1-349 VSDLSPEYAV LTSTIKTEVD STVNIIVVGQ SHLDGTYEDQ EIVANPPDIC ENSP00000377218/1-349 VSDLSPEYAV LTSTIKNEVD STVNIIVVGQ SHLDSNIENQ EIVTNPPDIC BACU007179/1-311 VSDLSPEYAA LTSAIKNEVD STVNIIVVGQ SHLGSNIEDQ EIVTNPPDIC bmy_00320T0/1-180 VSDLSPEYAA LTSAIKNEVD STVNII---- ---------- ---------- ENSTTRP00000008899/1-315 VSDLSPEYAA LTSAIKNEVD STVNIIVVGQ SHLDSNIEDQ EIVTNPPDIC 201 250 ENSBTAP00000013193/1-349 QVVEVTTESD EQPVSMSELY PLQISPVSSY AESETTDSVP SDEESAEGRP ENSP00000377218/1-349 QVVEVTTESD EQPVSMSELY PLQISPVSSY AESETTDSVP SDEESAEGRP BACU007179/1-311 QVVEVTTESD EQPVSMSELY PLQISPVSSY AESETTDSVP SDEESSEGRP bmy_00320T0/1-180 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008899/1-315 QVVEVTTESD EQAVSMSELY PLQISPVSSY AESETTDSVP SDEESSEGRP 251 300 ENSBTAP00000013193/1-349 HWRKRSVEGK QYLSNMGPRN TYLLPSMATF VTSNKPDLQV TIKEESCPVP ENSP00000377218/1-349 HWRKRNIEGK QYLSNMGTRG SYLLPGMASF VTSNKPDLQV TIKEESNPVP BACU007179/1-311 HWRKRNIEGK QYLSNMGTRS TYLLPSMATF VTSNKPDLQV TIKEESCPVP bmy_00320T0/1-180 --------GK LF-------- ---------- ---------- ---------- ENSTTRP00000008899/1-315 HWRKRNIEGK QYLSNMGTRS TYLLPSMATF VTSNKPDLQV TIKEESCPVP 301 350 ENSBTAP00000013193/1-349 YNSSWPPFPD LPITAPMSPT PSSSRPDRET RASVIKKTSD ITQARVKSY ENSP00000377218/1-349 YNSSWPPFQD LPLSSSMTPA SSSSRPDRET RASVIKKTSD ITQARVKSC BACU007179/1-311 YNSSWPPFPD LPLAPSVTPA PSSSRPDRET RASVIKKTSD ITQARVKSC bmy_00320T0/1-180 ---------- ---------- ---------- ---------- --------- ENSTTRP00000008899/1-315 YNSSWPPFPD HPLSP----- ---------- ---------- ---------