KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:27 2014 Check: 00 .. Name: ENSP00000262375/1-480 Len: 480 Check: 5306 Weight: 1.00 Name: BACU009157/1-467 Len: 480 Check: 9891 Weight: 1.00 Name: ENSBTAP00000013207/1-453 Len: 480 Check: 2559 Weight: 1.00 Name: ENSTTRP00000005021/1-356 Len: 480 Check: 2667 Weight: 1.00 Name: bmy_02790T0/1-480 Len: 480 Check: 6082 Weight: 1.00 // 1 50 ENSP00000262375/1-480 MAARCSTRWL LVVVGTPRLP AISGRGARPP REGVVGAWLS RKLSVPAFAS BACU009157/1-467 MAAWCSTRWL LVAVGAPRLP AAAGRGARPP MGGVVGASLG RSLSVTAFAP ENSBTAP00000013207/1-453 MAARHSTRWL LVAVGTPRLP AAAGRGARPP MGGVVGASLG RNLSVTAFPP ENSTTRP00000005021/1-356 ---------- ---------- ---------- ---------- ---------- bmy_02790T0/1-480 MAAWCSTRWL LVAVGAPRLP AAAGRGARPP MGGVVGASLG RSLSVTAFAP 51 100 ENSP00000262375/1-480 SLTSCGPRAL LTLRPGVSLT GTKHNPFICT ASFHTSAPLA KEDYYQILGV BACU009157/1-467 SLGARGPGAL LTLRPGVSLT GVKSYPFLCT ASFHTSAPLA KEDYYQILGV ENSBTAP00000013207/1-453 SLGGRGPGAL LTLRPGVSFT GVKRYPFVCI ASFHTSTHLA KEDYYQILGV ENSTTRP00000005021/1-356 ---------- ---------- ---------- ---------- ---------- bmy_02790T0/1-480 SLGARGPGAL LTLRPSVSLT GVKSYPFLCT ASFHTSAPLA KEDYYQILGV 101 150 ENSP00000262375/1-480 PRNASQKEIK KAYYQLAKKY HPDTNKDDPK AKEKFSQLAE AYEVLSDEVK BACU009157/1-467 PRSASQKEIK KAYYQLAKKY HPDTNKDDPK AKEKFSQLAE AYEVLSDEVK ENSBTAP00000013207/1-453 PRNASQKEIK KAYYQLAKKY HPDTNKDDPK AKEKFSQLAE AYEVLSDEVK ENSTTRP00000005021/1-356 ---------- -----LAKKY RPDTNKDDPK AKEKFSQLAE AYEVLSDEVK bmy_02790T0/1-480 PRSASQKEIK KAYYQLAKKY HPDTNKDDPK AKEKFSQLAE AYEVLSDEVK 151 200 ENSP00000262375/1-480 RKQYDAYGSA GFDPGASGSQ HSYWKGGPTV DPEELFRKIF GEFSSSSFGD BACU009157/1-467 RKQYDTYGST GFDTGASSSG QSYWKGGPTV DPEELFRKIF GEFSSSSFGD ENSBTAP00000013207/1-453 RKQYDTYGSA GFDPGAGSSG QSYWKGGPTV DPEELFRKIF GEFSSSSFGD ENSTTRP00000005021/1-356 RKQYDTYGSA GFDPGAGSSG QSYWKGGPTV DPEELFRKIF GEFSSSSFGD bmy_02790T0/1-480 RKQYDTYGSA GFDPGAGSSG QSYWKGGPTV DPEELFRKIF GEFSSSSFGD 201 250 ENSP00000262375/1-480 FQTVFDQPQE YFMELTFNQA AKGVNKEFTV NIMDTCERCN GKGNEPGTKV BACU009157/1-467 FQSVFHQPQE YIMELTFNQA AKGVNKEFTV NITDTCERCD GKGNEPGTKV ENSBTAP00000013207/1-453 FQSVFNQPQE YIMDLTFNQA AKGVNKEFTV NITDTCERCD GKGNEPGTKV ENSTTRP00000005021/1-356 FQSVFHQPQE YIMELTFNQA AKGVNKEFTV NITDTCERCG GKGNEPGTKM bmy_02790T0/1-480 FQSVFHQPQE YIMELTFNQA AKGVNKEFTV NITDTCERCD GKGNEPGTKV 251 300 ENSP00000262375/1-480 QHCHYCGGSG METINTGPFV MRSTCRRCGG RGSIIISPCV VCRGAGQAKQ BACU009157/1-467 QHCHYCGGSG METINTGPFV MRSTCRRCGG RGSIVTSPCV VCRGAGEAKQ ENSBTAP00000013207/1-453 QHCHYCGGSG METINTGPFV MRSTCRRCGG RGSIITSPCV VCRGAGQAKQ ENSTTRP00000005021/1-356 QHCHYCGGSG METINTGPFV MRSTCRRCGG RGSIITSPCV VCRGAGEAKQ bmy_02790T0/1-480 QHCHYCGGSG METINTGPFV MRSTCRRCGG RGSIVTSPCV VCRGAGEAKQ 301 350 ENSP00000262375/1-480 KKRVMIPVPA GVEDGQTVRM PVGKREIFIT FRVQKSPVFR RDGADIHSDL BACU009157/1-467 KKKVVIPVPA GVEDGQTVRM PVGKREIFIT FRVQKSPVFQ RDGADIHSNL ENSBTAP00000013207/1-453 KKKVVIPVPA GVEDGQTVRM PVGKREIFIT FRVQKSPVFR RDGADIHSDL ENSTTRP00000005021/1-356 KKKVVIPVPA ---------V PVGKREIFIT FRVQKSPVFR RDGADIHSDL bmy_02790T0/1-480 KKKVVIPVPA GVEDGQTVRM PVGKREIFIT FRVQKSPVFQ RDGADIHSNL 351 400 ENSP00000262375/1-480 FISIAQALLG GTARAQGLYE TINVTIPPGT QTDQKIRMGG KGIPRINSYG BACU009157/1-467 FISIAQAILG GTARAQGLYE TINVVIPPGT QSDQKIRMSG KGIPRINSYG ENSBTAP00000013207/1-453 FISIAQAILG GTARTQGLYE TINVTIPPGT QSDQKIRMSG KGIPRINSYG ENSTTRP00000005021/1-356 FISIAQAILG GTARAQGLYE TINVMIPPGT QSDQKIRMSG KGIPRINSYG bmy_02790T0/1-480 FISIAQAILG GTARAQGLYE TINVVIPPGT QSDQKIRMSG KGIPRINSYG 401 450 ENSP00000262375/1-480 YGDHYIHIKI RVPKRLTSRQ QSLILSYAED ETDVEGTVNG VTLTSSGGST BACU009157/1-467 YGDHYIHIKI RVPKRLTSRQ QSLILSYAED ETDVEGTVNG VTNTSTGQKS ENSBTAP00000013207/1-453 YGDHYIHIKI RVPKRLTSRQ QSLILSYAED ETDVEGTVNG VTNTSTGKRS ENSTTRP00000005021/1-356 YGDHYIHIKI RVPKRLTSRQ QSLILSYAED ETDVEGTVNG VTNTSTGGST bmy_02790T0/1-480 YGDHYIHIKI RVPKRLTSRQ QSLILSYAED ETDVEGTVNG VTNTSTGGST 451 500 ENSP00000262375/1-480 MDSSAGSKAR REAGEDEEGF LSKLKKMFTS BACU009157/1-467 ---------- -DVGID--CV IRVQRPTVYP ENSBTAP00000013207/1-453 TGN------- ---------- ---------- ENSTTRP00000005021/1-356 MDSSAGGKAR PEAGEDKEGL LSKLKKMFTS bmy_02790T0/1-480 MDSSAGGKAR PEAGEDKEGF LSKLKKMFTS