KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:27 2014 Check: 00 .. Name: ENSP00000458762/1-299 Len: 299 Check: 7898 Weight: 1.00 Name: ENSBTAP00000013208/1-299 Len: 299 Check: 9763 Weight: 1.00 Name: bmy_02791T0/1-271 Len: 299 Check: 5222 Weight: 1.00 Name: ENSTTRP00000005034/1-299 Len: 299 Check: 6724 Weight: 1.00 Name: BACU009156/1-299 Len: 299 Check: 7321 Weight: 1.00 // 1 50 ENSP00000458762/1-299 MVDKKLVVVF GGTGAQGGSV ARTLLEDGTF KVRVVTRNPR KKAAKELRLQ ENSBTAP00000013208/1-299 MADKKLVVVF GATGAQGGSV ARTLLEDGTF RVRVVTRDPG QRAAKQLRLQ bmy_02791T0/1-271 MADKKLVVVF GATGAQGGSV ARTLLEDGTF GVRVVTRDPG QRAAKELRLQ ENSTTRP00000005034/1-299 MADKKLVVVF GATGAQGGSV ARTLLEDGTF RVRVVTRDPG QRAAKKLRLQ BACU009156/1-299 MADKKLVVVF GATGAQGGSV ARTLLEDGTF RVRVVTRDPG QRAAKELRLQ 51 100 ENSP00000458762/1-299 GAEVVQGDQD DQVIMELALN GAYATFIVTN YWESCSQEQE VKQGKLLADL ENSBTAP00000013208/1-299 GAEVVQGDQD DEASMELALS GAHATFIVTN YWENCSQEQE VKQGKLLADL bmy_02791T0/1-271 GAEVVQGDQD DEASMELALI GAHATFIVTN YWENCSQEQE VKQGKLLADL ENSTTRP00000005034/1-299 GAEVVQGDQD DEASMELALI GAHATFIVTN YWENCSQEQE VKQGKLLADL BACU009156/1-299 GAEVVQGDQD DEASMELALI GAHATFIVTN YWENCSQEQE VKQGKLLADL 101 150 ENSP00000458762/1-299 ARRLGLHYVV YSGLENIKKL TAGRLAAAHF DGKGEVEEYF RDIGVPMTSV ENSBTAP00000013208/1-299 AKRLGLRYVV YSGLENIKKL TAGRLTVGHF DGKGEVEEYF RDIGVPMTSV bmy_02791T0/1-271 AKRLGLHYVV YSGLENIKKL TAGRLAAGHF DGKGEVEEYF RDIGLPMGDV ENSTTRP00000005034/1-299 AKCLGLHYVV YSGLENIKKL TAGRLAAGHF DGKGEVEEYF RDIGVPMTSV BACU009156/1-299 AKRLGLHYVV YSGLENIKKL TAGRLAAGHF DGKGEVEEYF RDIGVPMTSV 151 200 ENSP00000458762/1-299 RLPCYFENLL SHFLPQKAPD GKSYLLSLPT GDVPMDGMSV SDLGPVVLSL ENSBTAP00000013208/1-299 RLPCYFENLL SYFLPQKAPD GRSYLLSLPM GDVPIDGMSV ADLGPVVLSL bmy_02791T0/1-271 ---------- ---------- --------PM GDVPMDGMSV SDLGPVVLSL ENSTTRP00000005034/1-299 RLPCYFENLL SCFLPQKAPD GKSYLLSLPM GDVPMDGMSV SDLGPVVLSL BACU009156/1-299 RLPCYFENLL SFFLPQKAPD GKSYLLSLPM GDVPMDGMSV SDLGPVVLSL 201 250 ENSP00000458762/1-299 LKMPEKYVGQ NIGLSTCRHT AEEYAALLTK HTRKVVHDAK MTPEDYEKLG ENSBTAP00000013208/1-299 LKTPEEYVGR NIGLSTCRHT VEEYAALLTK HTGKAVRDAK TSPEDYEKLG bmy_02791T0/1-271 LKMPEDYIGR NIGLSTCRHT VEEYAPLLSR HTRKTVRDAK ISPEDYEKLG ENSTTRP00000005034/1-299 LKMPEDYIGQ NIGLSTCRHT VEEYAALLSR HTRKTVRDAK ISPEDYEKLG BACU009156/1-299 LKMPEDYIGR NIGLSTCRHT VEEYAALLSR HTRKTVRDAK ISPEDYEKLG 251 300 ENSP00000458762/1-299 FPGARDLANM FRFYALRPDR DIELTLRLNP KALTLDQWLE QHKGDFNLL ENSBTAP00000013208/1-299 FPGAQDLANM FRFYALKPDR NIELTLKLNP KARRLDQWLE QHKEDFAGL bmy_02791T0/1-271 FPGAQDLANM FRFYALKPDR NIELSLRLNP KARTLDQWLE QHKGDFAGL ENSTTRP00000005034/1-299 FPGAQDLANM FRFYALKPDR NIELSLRLNP KARTLDQWLE QHKGDFAGL BACU009156/1-299 FPGAQDLANM FRFYALKPDR NIELSLRLNP KARTLDQWLE QHKGDFAGL