KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:34 2014 Check: 00 .. Name: ENSP00000319851/1-594 Len: 595 Check: 2078 Weight: 1.00 Name: ENSBTAP00000013227/1-594 Len: 595 Check: 992 Weight: 1.00 Name: ENSTTRP00000011646/1-593 Len: 595 Check: 7473 Weight: 1.00 Name: bmy_09132T0/1-373 Len: 595 Check: 4672 Weight: 1.00 Name: BACU005580/1-594 Len: 595 Check: 4174 Weight: 1.00 // 1 50 ENSP00000319851/1-594 MWCLLRGLGR PGALA-RGAL GQQQSLGARA LASAGSESRD EYSYVVVGAG ENSBTAP00000013227/1-594 MWCVLRGW-R GGCLGPWGAL GAQGPRGLRA LASKHPRSRG DYSHVVVGAG ENSTTRP00000011646/1-593 MWCILRGW-M RGAWA-WGAL GQHWPRGIRA LASERPRIGG EYSHVVVGAG bmy_09132T0/1-373 MWCILQGW-R RGSLGPWGAL GQHWPRGIRA LASERPRIGD EYSHVVVGAG BACU005580/1-594 MWCILPGW-R RGSLGPWRAL GQHWPRGIRA LASERPRIGG EYSHVVVGAG 51 100 ENSP00000319851/1-594 SAGCVLAGRL TEDPAERVLL LEAGPKDVLA GSKRLSWKIH MPAALVANLC ENSBTAP00000013227/1-594 SAGCVLAGRL TEDPDQHVLL LEAGPKDVYA GSKRLCWKIH MPAALVANLC ENSTTRP00000011646/1-593 SAGCVLAGRL TEDPDKRVLL LEAGPKDVFA GSKRLLWKIH MPAALVANLC bmy_09132T0/1-373 SAGCVLASRL TEDPDKRVLL LEAGPKDVYA GSKRLLWKIH MPAALVANLC BACU005580/1-594 SAGCVLASRL TEDPDKRVLL LEAGPKDVYA GSKRLLWKIH MPAALVANLC 101 150 ENSP00000319851/1-594 DDRYNWCYHT EVQRGLDGRV LYWPRGRVWG GSSSLNAMVY VRGHAEDYER ENSBTAP00000013227/1-594 DDTYNWCYHT EPQAGLDGRV LYWPRGRVWG GSSSLNAMVY VRGHAEDYER ENSTTRP00000011646/1-593 DDRYNWCYHT EPQPGLDGRV LYWPRGRVWG GSSSLNAMVY IRGHAEDYER bmy_09132T0/1-373 DDRYNWCYYT EPQPGLDGRV LYWPRGRVWG GSSSLNAMVY VRGHAEDYER BACU005580/1-594 DDRYNWCYYT EPQPGLDGRV LYWPRGRVWG GSSSLNAMVY VRGHAEDYER 151 200 ENSP00000319851/1-594 WQRQGARGWD YAHCLPYFRK AQGHELGASR YRGADGPLRV SRGKTNHPLH ENSBTAP00000013227/1-594 WQRQGAAGWD YAHCLPYFRR AQAHELGAGR YRGGDGPLRV SRGKSGHPLH ENSTTRP00000011646/1-593 WQREGAAGWD YAHCLPYFRK AQAHELGAGR YRGGGGPLRV SRGKSGHPLH bmy_09132T0/1-373 WQREGAAGWD YARCLPYFRK AQAHELGAGR YRGGDGPLRV SRGKSGHPLH BACU005580/1-594 WQREGAAGWD YAHCLPYFRK AQAHELGAGR YRGGDGPLRV SRGKSGHPLH 201 250 ENSP00000319851/1-594 CAFLEATQQA GYPLTEDMNG FQQEGFGWMD MTIHEGKRWS AACAYLHPAL ENSBTAP00000013227/1-594 RAFLEAAQQA GYPLTEDMNG FQQEGFGWMD MTIHEGKRWS TACAYLHPAL ENSTTRP00000011646/1-593 RAFLEAAQEA GYPLTEDMNG FQQEGFGWMD MTIHEGKRWS TACAYLHPAL bmy_09132T0/1-373 RAFLEAAQEA GYPLTEDMNG FQQEGFGWMD MTIHEGKRWS TACAYLHPAL BACU005580/1-594 RAFLEAAQEA GYPLTEDMNG FQQEGFGWMD MTIHEGRRWS TACAYLHPAL 251 300 ENSP00000319851/1-594 SRTNLKAEAE TLVSRVLFEG TRAVGVEYVK NGQSHRAYAS KEVILSGGAI ENSBTAP00000013227/1-594 SRPNLTAETQ TFVRRVLFEG TRAVGVEYLK NGESHRAYAS KEVILSGGAI ENSTTRP00000011646/1-593 SRPTLTAETQ TFVSRVLFEG TRAVGVEYIK NGQSHRAFAS KEVILSGGAV bmy_09132T0/1-373 RRPTLTAETR TFVSRVLFEG TRAVGVEYIK NGQSHRAYAS KEVILSGGAI BACU005580/1-594 RRPTLTAETQ TFVSRVLFEG TRAVGVEYIK NGQSHRAYAS KEVILSGGAI 301 350 ENSP00000319851/1-594 NSPQLLMLSG IGNADDLKKL GIPVVCHLPG VGQNLQDHLE IYIQQACTRP ENSBTAP00000013227/1-594 NSPQLLMLSG VGNADDLRKL GIPVVCHLPG VGQNLQDHLE IYIQQACTRP ENSTTRP00000011646/1-593 NSPQLLMLSG VGNADDLKQL GIPVVCHLPG VGQNLQDHLE IYIQQACTAP bmy_09132T0/1-373 NSPQLLMLSG VGNADDLKQL GIPVVCHLPG VGQNLQDHLE IYIQQACTSP BACU005580/1-594 NSPQLLMLSG VGDADDLKQL GIPVVCHLPG VGQNLQDHLE IYIQQACTSP 351 400 ENSP00000319851/1-594 ITLHSAQKPL RKVCIGLEWL WKFTGEGATA HLETGGFIRS QPGVPHPDIQ ENSBTAP00000013227/1-594 ITLHSAQKPL KKAWIGLEWL WKFTGYGATA HLETGGFIRS QPGVPHPDIQ ENSTTRP00000011646/1-593 ITLHSAQKPL RKVRIGLEWL WKFTGDGATA HLETGGFIRS QPGVPHPDIQ bmy_09132T0/1-373 ITLHSAQKPL RKVRIGLEWL WKFT------ ---------- ---------- BACU005580/1-594 ITLHSAQKPL RKVRIGLEWL WKFTGDGATS HLETGGFIRS QPGVPHPDIQ 401 450 ENSP00000319851/1-594 FHFLPSQVID HGRVPTQQEA YQVHVGPMRG TSVGWLKLRS ANPQDHPVIQ ENSBTAP00000013227/1-594 FHFLPSQVID HGRVPPQQEA YQVHVGTMRG TSVGWLKLRS ANPHDHPVIQ ENSTTRP00000011646/1-593 FHFLPSQVID HGRVPPQQEA YQVHVGTMRG TSVGWLKLRS ANPHDHPVIQ bmy_09132T0/1-373 ---------- ---------- ---------- ---------- ---------- BACU005580/1-594 FHFLPSQVID HGRVPPQQEA YQVHVGTMRG TSVGWLKLRS ANPHDHPVIQ 451 500 ENSP00000319851/1-594 PNYLSTETDI EDFRLCVKLT REIFAQEALA PFRGKELQPG SHIQSDKEID ENSBTAP00000013227/1-594 PNYLSTETDI KDFRLCVRLT REIFAQKALA PFRGKELQPG SHIQSDAEID ENSTTRP00000011646/1-593 PNYLSTETDI DDFRRCVRLT REIFAQKALA PFRGKELQPG SHVQSDKEID bmy_09132T0/1-373 ---------- ---------- ---------- ---------- ---------- BACU005580/1-594 PNYLSTETDI NDFRRCVRLT REIFAQKALA PFRGKELQPG SHVQSDKEID 501 550 ENSP00000319851/1-594 AFVRAKADSA YHPSCTCKMG QPSDPTAVVD PQTRVLGVEN LRVVDASIMP ENSBTAP00000013227/1-594 AFVRAKADSA YHPSCTCKMG QPSDPTAVVD PQTRVLGVEN LRVVDASIMP ENSTTRP00000011646/1-593 AFVRAKADSA YHPSCTCKMG QPSDPMAVVD PQTRVLGVEN LRVVDASIMP bmy_09132T0/1-373 ---------- ---------- ---------- ---------- ---------- BACU005580/1-594 AFVRAKADSA YHPSCTCKMG QPSDPMAVVD PQTRVLGVEN LRVVDASIMP 551 600 ENSP00000319851/1-594 SMVSGNLNAP TIMIAEKAAD IIKGQPALWD KDVPVYKPRT LATQR ENSBTAP00000013227/1-594 SVVSGNLNAP TIMIAEKAAD IIQGRPALWD EDVPVYKPRT LATQR ENSTTRP00000011646/1-593 SVVSGNLNAP TIMIAEKAAD IIKGRPALWD EAVPVYKPRT LATQR bmy_09132T0/1-373 ---------- ---------- ---------- ---------- ----- BACU005580/1-594 SVVSGNLNAP TIMIAEKAAD IIKGRPALWD EAVPVYKPRT LATQR