KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:34 2014 Check: 00 .. Name: bmy_05187T0/1-530 Len: 572 Check: 1792 Weight: 1.00 Name: ENSP00000341874/1-519 Len: 572 Check: 6245 Weight: 1.00 Name: ENSBTAP00000013242/1-519 Len: 572 Check: 5165 Weight: 1.00 Name: BACU017860/1-481 Len: 572 Check: 8348 Weight: 1.00 Name: ENSTTRP00000008376/1-517 Len: 572 Check: 4644 Weight: 1.00 // 1 50 bmy_05187T0/1-530 RLLLPPPLRP PSVISAPAPA PRRSYPAAYL LGGGCFPVLP PLCSVLVADF ENSP00000341874/1-519 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013242/1-519 ---------- ---------- ---------- ---------- ---------- BACU017860/1-481 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008376/1-517 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_05187T0/1-530 FRHMDLVGVA SPEPGPAAAW GPSKCPWATP QNTISCSLSD VMSEQLAKEL ENSP00000341874/1-519 ---MDLVGVA SPEPGTAAAW GPSKCPWAIP QNTISCSLAD VMSEQLAKEL ENSBTAP00000013242/1-519 ---MDLVRVA SPEPGPAAAW GPNKCPWATP QNTISCSLSD VMSEQLAKEL BACU017860/1-481 ---------- ---------- ---------- ---------- -MSEQLAKEL ENSTTRP00000008376/1-517 ---MDLVGVA SPEPGPAAAW APSKCPWATP QNTISCSLSD VMSEQLAKEL 101 150 bmy_05187T0/1-530 QLEEEAAAFP EVAVAEGPFI TGENIDTSSD LMLAQMLQME FDREYDAQLR ENSP00000341874/1-519 QLEEEAAVFP EVAVAEGPFI TGENIDTSSD LMLAQMLQME YDREYDAQLR ENSBTAP00000013242/1-519 QLEEEAAAFP EVTVAEGPFI TGENIDTSSD LMLAQMLQME FDREYDAQLR BACU017860/1-481 QLEEEAAAFP EVAVAEGPFI TGENIDTSSD LMLAQMLQME FDREYDAQLR ENSTTRP00000008376/1-517 QLEEEAAAFP EVVVADGPFI TGENIDTSSD LMLAQMLQME FDREYDAQLR 151 200 bmy_05187T0/1-530 REEKKFNGDS KVSISFENYR KVHPYEDSDS SEDEVDWQDT RDDPYRPAKP ENSP00000341874/1-519 REEKKFNGDS KVSISFENYR KVHPYEDSDS SEDEVDWQDT RDDPYRPAKP ENSBTAP00000013242/1-519 REEKKFNGDS KVCISFENYR KVHPYEDSDS SEDEVDWQDT RDDPYRPAKP BACU017860/1-481 REEKKFNGDS KVSISFENYR KVHPYEDSDS SEDEVDWQDT RDDPYRPAKP ENSTTRP00000008376/1-517 REEKKFNGDS KVSISFENYR KVHPYEDSDS SEDEVDWQDT RDDPYRPAKP 201 250 bmy_05187T0/1-530 VPTPKKGFIG KGKDITTKHD EVVCGRKNTA RMENFAPGFQ VGDGIGMDLK ENSP00000341874/1-519 VPTPKKGFIG KGKDITTKHD EVVCGRKNTA RMENFAPEFQ VGDGIGMDLK ENSBTAP00000013242/1-519 IPTPKKGFIG KGKDITTKHD EVVCGRKNTA RMENFAPGFQ VGDGIGMDLK BACU017860/1-481 VPTPKKGFIG KGKDITTKHD EVVCGRKNTA RMENFAPGFQ VGDGIGMDLK ENSTTRP00000008376/1-517 VPTPKKGFIG KGKDITTKHD EVVCGRKNTA RMENFAPGFQ VGDGIGMDLK 251 300 bmy_05187T0/1-530 LSNHVFNALK QHAYSEARRS ARLHEKKEHS TAEKAVDAKT RLLMYKMVNC ENSP00000341874/1-519 LSNHVFNALK QHAYSEERRS ARLHEKKEHS TAEKAVDPKT RLLMYKMVNS ENSBTAP00000013242/1-519 LSNHVFNALK QHAYSEERRS ARLHEKKEHS TAEKAVDPKT RLLMYKMVNS BACU017860/1-481 LSNHVFNALK QHAYSEERRS ARLHEKKEHS TAEKAVDPKT RLLMYKMVNC ENSTTRP00000008376/1-517 LSNHVFNALK QHAYSD-RRS ARLHE-KEHS TAEKAVDPKT RLLLYKMVNC 301 350 bmy_05187T0/1-530 GILETITGCI STGKESVVFH AYGGSMEDEK EDSKVIPTEC AIKVFKTTLN ENSP00000341874/1-519 GMLETITGCI STGKESVVFH AYGGSMEDEK EDSKVIPTEC AIKVFKTTLN ENSBTAP00000013242/1-519 GMLETITGCI STGKESVVFH AYGGSMEDGK EDSKVIPTEC AIKVFKTTLN BACU017860/1-481 GILETITGCI STGKESVVFH AYGGSMEDEK EDSKVIPTEC AIKVFKTTLN ENSTTRP00000008376/1-517 GMLETITGCI STGKESVVFH AYGGSMEDEK EDSKVIPTEC AIKVFKTTLN 351 400 bmy_05187T0/1-530 EFKNRDKYIK DDFRFKDRFS KLNPRKIIRM WAEKEMHNLT R--------- ENSP00000341874/1-519 EFKNRDKYIK DDFRFKDRFS KLNPRKIIRM WAEKEMHNLA RMQRAGIPCP ENSBTAP00000013242/1-519 EFKNRDKYIK DDFRFKDRFS KLNPRKIIRM WAEKEMHNLT RMQRAGIPCP BACU017860/1-481 EFKNRDKYIK DDFRFKDRFS KLNPRKIIRM WAEKEMHNLT RMQRAGIPCP ENSTTRP00000008376/1-517 EFKNRDKYIK DDFRFKDRFS KLNPRKIIRM WAEKEMHNLT RMQRAGIPCP 401 450 bmy_05187T0/1-530 ------KCLF HLMFVHL--- ---------- ---------- ----LMQQLY ENSP00000341874/1-519 TVVLLKKHIL VMSFIGHDQV PAPKLKEVKL NSEEMKEAYY QTLHLMRQLY ENSBTAP00000013242/1-519 TVVLLKKHIL VMSFIGHDQV PAPKLKEVKL SSEEMKDAYY QTLHLMQQLY BACU017860/1-481 TVVLLKKHIL VMSFIGHDQV PAPKLKEVKL SSEEMKEAYY QTLHLMQQLY ENSTTRP00000008376/1-517 TVVLLKKHIL VMSFIGYDQV PAPKLKEVKL SSEEMKEAYY QTLHLMQQLY 451 500 bmy_05187T0/1-530 NECKLVHADL SEYNMLWRAG KVWLIDVSQS VEPTHPHGLE FLFRDCRNVS ENSP00000341874/1-519 HECTLVHADL SEYNMLWHAG KVWLIDVSQS VEPTHPHGLE FLFRDCRNVS ENSBTAP00000013242/1-519 DECTLVHADL SEYNMLWHAG KVWLIDVSQS VEPTHPHGLE FLFRDCRNVS BACU017860/1-481 NECKLVHADL SEYNMLWHAG KVWLIDVSQS VEPTHPHGLE FLFRDCRNVS ENSTTRP00000008376/1-517 NECKLVHADL SEYNMLWHAG KVWLIDVSQS VEPTHPHGLE FLFRDCRNVS 501 550 bmy_05187T0/1-530 QFFQKGGVKE ALSERELFNA VSGLNISADN EADFLAEIEA LEKMNEDHVQ ENSP00000341874/1-519 QFFQKGGVKE ALSERELFNA VSGLNITADN EADFLAEIEA LEKMNEDHVQ ENSBTAP00000013242/1-519 QFFQKGGVKE ALGERELFNA VSGLNISADN EADFLAEIEA LEKMNEDHVQ BACU017860/1-481 QFFQKGGVKE ALSERELFNA VSGLNISADN EADFLAEIEA LEKMNEDHVQ ENSTTRP00000008376/1-517 QFFQKGGVKE ALSERELFNA VSGLNISADN EAEFLAEIEA LEKMNEDHVQ 551 600 bmy_05187T0/1-530 KNGRKAASFL KDDGGPPVLY DE ENSP00000341874/1-519 KNGRKAASFL KDDGDPPLLY DE ENSBTAP00000013242/1-519 KNGRKAASFL KDDGGPPILY DE BACU017860/1-481 KNGRKAASFL KDDGGPPVLY DE ENSTTRP00000008376/1-517 KNGRKAASFL KDDGGPPVLY DE