KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:35 2014 Check: 00 .. Name: ENSP00000216341/1-247 Len: 560 Check: 2182 Weight: 1.00 Name: ENSBTAP00000013262/1-266 Len: 560 Check: 5820 Weight: 1.00 Name: BACU008683/1-507 Len: 560 Check: 623 Weight: 1.00 Name: ENSTTRP00000016081/1-283 Len: 560 Check: 4872 Weight: 1.00 Name: bmy_16875T0/1-265 Len: 560 Check: 1565 Weight: 1.00 // 1 50 ENSP00000216341/1-247 ---------- ---------- ---------- -----MQPIL LL----LAFL ENSBTAP00000013262/1-266 ---------- -----SEREP GGSTSISILG SLSRKMKPLL LL----VAFL BACU008683/1-507 ---------- ---------- ---------- -----MQPLL LL--LLLAFL ENSTTRP00000016081/1-283 KRSLSPLHLL PLLGGLKREQ GGNTSSSDLG SLPGKMQPLL FL--LPLAFS bmy_16875T0/1-265 ---------- ---------- ---------- -----MQPLL LLLLLLLXFL 51 100 ENSP00000216341/1-247 LLPRADA--- ---------- --GEIIGGHE AKPHSRPYMA YLMIWDQKSL ENSBTAP00000013262/1-266 LTPRAKA--- ---------- --GEIIGGHE AKPHSRPYMA YLQYWNQDVQ BACU008683/1-507 LPPRAKA--- ---------- --GEIIGGHE AKRHSRPYMA YLQIWDQDDR ENSTTRP00000016081/1-283 LPPRAKS--- ---------- --GEIIGGHE AKPHSRPYMA FLQIWDQDDQ bmy_16875T0/1-265 LPPRAKAGAV SGCTQAEQSF PSGEIIGGHE AKRHSRPYMA FLQIWDQDDR 101 150 ENSP00000216341/1-247 KRCGGFLIRD DFVLTAAHCW GSSINVTLGA HNIKEQEPTQ QFIPVKRPIP ENSBTAP00000013262/1-266 SRCGGFLVRQ DFVLTAAHCN GSSIKVTLGA HNIKQQERTQ QVIRVRRAIS BACU008683/1-507 KRCGGFLIRE DFVLTAAHCW GSSVNVTLGA HNIKVRERTQ QVIPVRKAIP ENSTTRP00000016081/1-283 KRCGGFLIRE DFVLTAAHCW GSSVNVTLGA HNIKDRERTQ QVIPVRRAIP bmy_16875T0/1-265 KRCGGFLIRE DFVLTAAHCW GSSVNVTLGA HNIKVRERTQ QVIPVRKAIP 151 200 ENSP00000216341/1-247 HPAYNPKNFS NDIMLLQLER KAKRTRAVQP LRLPSNKAQV KPGQTCSVAG ENSBTAP00000013262/1-266 HPDYNPKNFS NDIMLLKLER KAKQTSAVKP LSLPRAKARV KPGQTCSVAG BACU008683/1-507 HPDYNKKNYS NDIMLLKLER KAKRTAAVRP LSLPRGKARV KPGQVCSVAG ENSTTRP00000016081/1-283 HPGYNEKNYS NDIMLLKLER KVKQTAAVRP LSLPRRKARV KPGRVCSVAG bmy_16875T0/1-265 HPDYNKKNYS NDIMLLKLER KAKQTAAVRP LSLPRGKARV KPGQVCSVAG 201 250 ENSP00000216341/1-247 WGQTAPLGKH SHTLQEVKMT VQEDRKCESD LRHYYDSTIE LCVGDPEIKK ENSBTAP00000013262/1-266 WGRDS-TDTY ADTLQEVKLI VQEDQKCEAY LRNFYNRAIQ LCVGDPKTKK BACU008683/1-507 WGQVA-MGTY SDTLQEVKLT IQEDQKCESH LRNYYNNAIQ LCVGDPKENK ENSTTRP00000016081/1-283 WGQVA-LGTY SDTLQEVKLT IQKDQKCELY LHNYYNNAIQ LCVGDPKENK bmy_16875T0/1-265 WGQVA-MGTY SDTLQEVKLT IQKDQECESH LHNYYNNTIQ LCVGDPKENK 251 300 ENSP00000216341/1-247 TSFK------ ---------- ---------- ---------- ---------- ENSBTAP00000013262/1-266 ASFQ------ ---------- ---------- ---------- ---------- BACU008683/1-507 ASFKGDSGGP LPFLSEEIIG GHEAKPHSRP YMVFVQFLDK ESWKRCSGVL ENSTTRP00000016081/1-283 ASFK------ ---------- ---------- ---------- ---------- bmy_16875T0/1-265 ASFK------ ---------- ---------- ---------- ---------- 301 350 ENSP00000216341/1-247 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013262/1-266 ---------- ---------- ---------- ---------- ---------- BACU008683/1-507 AQKDFVLTAA HCRGSLINVT LGAHNIKKQE RTQQMIPVRR AIPHPDYNPK ENSTTRP00000016081/1-283 ---------- ---------- ---------- ---------- ---------- bmy_16875T0/1-265 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000216341/1-247 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013262/1-266 ---------- ---------- ---------- ---------- ---------- BACU008683/1-507 NYSNDIMLLQ ARKPPHSSCP PGDRSFPLHY RLSLPSPPSG CLTSPSGSGE ENSTTRP00000016081/1-283 ---------- ---------- ---------- ---------- ---------- bmy_16875T0/1-265 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000216341/1-247 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013262/1-266 ---------- ---------- ---------- ---------- ---------- BACU008683/1-507 GGGQCGLIVA PKPRDHWLSW TLASSHQLER KAKRTAAVRP LSLPRGKARV ENSTTRP00000016081/1-283 ---------- ---------- ---------- ---------- ---------- bmy_16875T0/1-265 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000216341/1-247 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013262/1-266 ---------- ---------- ---------- ---------- ---------- BACU008683/1-507 KPGKACSVAG WGQVAVGTPT TTLHEAELTV QEDPVCKSLF PGYYSQATQI ENSTTRP00000016081/1-283 ---------- ---------- ---------- ---------- ---------- bmy_16875T0/1-265 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000216341/1-247 ---------- ---GDSGGPL VCNKVAQGIV SYGRNNGMPP RACTKVSSFV ENSBTAP00000013262/1-266 ---------- ---GDSGGPL VCDNVAQGIV SYGKRDGSTP RAFTKVSSFL BACU008683/1-507 CVGDPRKVKA AFKGDSGGPL VCKKVVQGIF SYGKANGKSP GVFTKVSPFL ENSTTRP00000016081/1-283 ---------- ---GDSGGPL VCNNVAQGIV SYGQKNGSPP RACTKVSSFL bmy_16875T0/1-265 ---------- ---GDSGGPL VCNNVAQGIV SYGQKNGSPP RACTKVSSFL 551 600 ENSP00000216341/1-247 HWIKKTMKRY ENSBTAP00000013262/1-266 PWIKKTMKSL BACU008683/1-507 SWIKRTMKRL ENSTTRP00000016081/1-283 PWIKKTMKSL bmy_16875T0/1-265 PWIKKTMKTL