KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:36 2014 Check: 00 .. Name: ENSP00000239906/1-392 Len: 510 Check: 3417 Weight: 1.00 Name: ENSBTAP00000013264/1-392 Len: 510 Check: 3084 Weight: 1.00 Name: BACU004105/1-466 Len: 510 Check: 3471 Weight: 1.00 Name: bmy_12148T0/1-365 Len: 510 Check: 1875 Weight: 1.00 Name: ENSTTRP00000005153/1-392 Len: 510 Check: 5116 Weight: 1.00 // 1 50 ENSP00000239906/1-392 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013264/1-392 ---------- ---------- ---------- ---------- ---------- BACU004105/1-466 MLRRDRICFP RKEVREESLS SRIEMVSVGV STEPCHARWE VETDAIVLQR bmy_12148T0/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005153/1-392 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000239906/1-392 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013264/1-392 ---------- ---------- ---------- ---------- ---------- BACU004105/1-466 RQKQIDYGKR TPGYQCFLQQ VPKWGMDNLL EPMDSSPLDD WLQTLEPSEN bmy_12148T0/1-365 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005153/1-392 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000239906/1-392 ---------- --------MI TLITEQLQKQ TLDELKCTRF SISLPLPDHA ENSBTAP00000013264/1-392 ---------- --------MI TLITEQLQKQ TLDELKCTRF SISLPLPDHA BACU004105/1-466 LDGEQKGAQC ASQIPGRIMI TLITEQLQKQ TLDELKCTRF SISLPLPDHV bmy_12148T0/1-365 ---------- --------MI TLITEQLQKQ TLDELKCTRF SISLPLPDHV ENSTTRP00000005153/1-392 ---------- --------MI TLITEQLQKQ TLDELKCTRF SISLPLPDHV 151 200 ENSP00000239906/1-392 DISNCGNSFQ LVSEGASWRG LPHCSCAEFQ DSLNFSYHPS GLSLHLRPPS ENSBTAP00000013264/1-392 DISNCGNPFQ LVSEGASWRG LPHCSCAEFQ DSLNLSYHPS GLSLHLRPPS BACU004105/1-466 DISNCGNPFQ LVSEGASWRG LPHCSCAEFQ DSLNLSYHPS GLSLHLRPPS bmy_12148T0/1-365 DISNCGNPFQ LV-------- ---------- ---------S GLSLHLRPPS ENSTTRP00000005153/1-392 DISNCGNPFQ LVSEGASWRG LPHCSCAEFQ DSLNLSYHPS GLSLHLRPPS 201 250 ENSP00000239906/1-392 RGNSPKEQPF SQVLRPEPPD PEKLPVPPAP PSKRHCRSLS VPVDLSRWQP ENSBTAP00000013264/1-392 PGSSPQEQSL SQVLSPEPPD PEKLPVPPAP PSKRHCRSLS VPVDLSRWQP BACU004105/1-466 PGNSPQEQPL SQVLSPEPPD PEKLPVPPAP PSKRHCRSLS VPVDLSRWQP bmy_12148T0/1-365 PGNSPQEQPL SQVLSPEPPD PEKLPVPPAP PSKRHCRSLS VPVDLSRWQP ENSTTRP00000005153/1-392 PGNSPQEQPL SQVLSPEPPD PEKLPVPPAP PSKRHCRSLS VPVDLSRWQP 251 300 ENSP00000239906/1-392 VWRPAPSKLW TPIKHRGSGG GGGPQVPHQS PPKRVSSLRF LQAPSASSQC ENSBTAP00000013264/1-392 VWRPAPSKLW TPIKHRGSGG GGGPQVPHQS PPKRVSSLRF LQAPSASSQC BACU004105/1-466 VWRPAPSKLW TPIKHRGSGG GGGPQVPHQS PPKRVSSLRF LQAPSASSQC bmy_12148T0/1-365 VWRPAPSKLW TPIKHRGSGG GGGPQVPHQS PPKRVSSLRF LQAPSASTQC ENSTTRP00000005153/1-392 VWRPAPSKLW TPIKHRGSGG GGGPQVPHQS PPKRVSSLRF LQAPSASSQC 301 350 ENSP00000239906/1-392 APAHRPYSPP FFSLALAQDS SRPCAASPQS GSWESDAESL SPCPPQRRFS ENSBTAP00000013264/1-392 APAHRPYSPP FFSLALAQDS SHPSAASPQS GSWESDAESL SPCPPQRRFS BACU004105/1-466 APPHRPYSPP FFSLALAQDS SCPSATSPQS GSWESDAESL SPCPPQRRFS bmy_12148T0/1-365 APPHRPYSPP FFSLALAQDS SRPSATSPQS GSWESDAESL SPCPPQRRFS ENSTTRP00000005153/1-392 APPHRPYSPP FFSLALAQDS SRPSATSPQS GSWESDAESL SPCPPQRRFS 351 400 ENSP00000239906/1-392 LSPSLGPQAS RFLPSARSSP ASSPELPWRP RGLRNLPRSR SQPCDLDARK ENSBTAP00000013264/1-392 LSPSLGPQAS RFLPSARSSP ASSPELPWRP RGLRNLPRSR SQPCDLDARK BACU004105/1-466 LSPSLGPQAS RFLPSARSSP ASSPELPWRP RGLRNLPRSR SQPCDLDARK bmy_12148T0/1-365 LSPSLGPQAS RFLPSTRSSP ASSPELPWRP RGLRNLPRSR SQPCDLDARK ENSTTRP00000005153/1-392 LSPSLGPQAS RFLPSARSSP ASSPELPWRP RGLRSLPRSR SQPCDLDARK 401 450 ENSP00000239906/1-392 TGVKRRHEED PRRLRPSLDF DKMNQKPYSG GLCLQETARE GSSISPPWFM ENSBTAP00000013264/1-392 AGVKRRHEED PRRLRPSLDF DKMNQKPYSG GLCLQETARE GSSISPPWFM BACU004105/1-466 AGVKRRHEED PRRLRPSLDF DKMN------ ---------- ---------- bmy_12148T0/1-365 AGVKRRHEED PRRLRPSLDF DKMNQKPYSG GLCLQETARE GSSISPPWFM ENSTTRP00000005153/1-392 AGVKRRHEED PRRLRPSLDF DKMNQKPYSG GLCLQETARE GSSISPPWFM 451 500 ENSP00000239906/1-392 ACSPPPLSAS CSPTGGSSQV LSESEEEEEG AVRWGRQALS KRTLCQRDFG ENSBTAP00000013264/1-392 ACSPPPLSAS CSPIGGSSQV LSESEEEEEG AVRWGRQALS KRTLCQQDFG BACU004105/1-466 ---------- --------QV LSESEEEEEG SVRWGRQALS KRTLCQQDFG bmy_12148T0/1-365 ACSPSHLSAS CSPIGDSSQV LSESEEEEEG SVRWGRQALS KRTLCQQDFG ENSTTRP00000005153/1-392 ACSPSHLSAS CSPIGDSSQV LSESEEEEEG SVRWGRQALS KRTLCQQDFG 501 550 ENSP00000239906/1-392 DLDLNLIEEN ENSBTAP00000013264/1-392 DLDLNLIEEN BACU004105/1-466 DLDLNLIEEN bmy_12148T0/1-365 DLDLNLIEEN ENSTTRP00000005153/1-392 DLDLNLIEEN