KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:38 2014 Check: 00 .. Name: ENSP00000262839/1-973 Len: 974 Check: 1359 Weight: 1.00 Name: bmy_14755T0/1-960 Len: 974 Check: 4329 Weight: 1.00 Name: ENSBTAP00000013270/1-974 Len: 974 Check: 1600 Weight: 1.00 Name: ENSTTRP00000014862/1-974 Len: 974 Check: 8274 Weight: 1.00 Name: BACU011860/1-305 Len: 974 Check: 2649 Weight: 1.00 // 1 50 ENSP00000262839/1-973 MAQLYYKKVN YSPYRDRIPL QIVRAETELS AEEKAFLNAV EKGDYATVKQ bmy_14755T0/1-960 MAQLYYKRVN YSPYRDRIPL QIVRAETELS AEEKAFLSAV EKGDYATVKQ ENSBTAP00000013270/1-974 MAQLYYKKVN YSPYRDRIPL QIVRAETELS AEEKAFLNAV EKGDYATVKQ ENSTTRP00000014862/1-974 MAQLYYKRVN YSPYRDRIPL QIVRAETELS AEEKAFLSAV EKGDYATVKQ BACU011860/1-305 MAQLYYKRVN YSPYRDRIPL QIVRAETELS AEEKAFLSAV EKGDYATVKQ 51 100 ENSP00000262839/1-973 ALQEAEIYYN VNINCMDPLG RSALLIAIEN ENLEIMELLL NHSVYVGDAL bmy_14755T0/1-960 ALQEAEIYYN VNINCMDPLG RSALLIAIEN ENLEIMELLL NHSVYVGDAL ENSBTAP00000013270/1-974 ALQEAEIYYN VNINCMDPLG RSALLIAIEN ENLEIMELLL NHSVYVGDAL ENSTTRP00000014862/1-974 ALQEAEIYYN VNINCMDPLG RSALLIAIEN ENLEIMELLL NHSVYVGDAL BACU011860/1-305 ALQEAEIYYN VNINCMDPLG RSALLIAIEN ENLEIMELLL NHSVYVGDAL 101 150 ENSP00000262839/1-973 LYAIRKEVVG AVELLLSYRR PSGEKQVPTL MMDTQFSEFT PDITPIMLAA bmy_14755T0/1-960 LYAIRKEVVG AVELLLSYRR PSGEKQVPTL MMDTQFSEFT PDITPIMLAA ENSBTAP00000013270/1-974 LYAIRKEVVG AVELLLSYRR PSGEKQVPTL MMDTQFSEFT PDITPIMLAA ENSTTRP00000014862/1-974 LYAIRKEVVG AVELLLSYRR PSGEKQVPTL MMDTQFSEFT PDITPIMLAA BACU011860/1-305 LYAIRKEVVG AVELLLSYRR PSGEKQVPTL MMDTQFSEFT PDITPIMLAA 151 200 ENSP00000262839/1-973 HTNNYEIIKL LVQKRVTIPR PHQIRCNCVE CVSSSEVDSL RHSRSRLNIY bmy_14755T0/1-960 HTNNYEIIKL LVQKRVTIPR PHQIRCNCVE CVSSSEVDSL RHSRSRLNIY ENSBTAP00000013270/1-974 HTNNYEIIKL LVQKRVTIPR PHQIRCNCVE CVSSSEVDSL RHSRSRLNIY ENSTTRP00000014862/1-974 HTNNYEIIKL LVQKRVTIPR PHQIRCNCVE CVSSSEVDSL RHSRSRLNIY BACU011860/1-305 HTNNYEIIKL LVQKRVTIPR PHQIRCNCVE CVSSSEGGSL RHSRSRLNIY 201 250 ENSP00000262839/1-973 KALASPSLIA LSSEDPILTA FRLGWELKEL SKVENEFKAE YEELSQQCKL bmy_14755T0/1-960 KALASPSLIA LSSEDPILTA FRLGWELKEL SKMENEFKAE YEELSQQCKL ENSBTAP00000013270/1-974 KALASPSLIA LSSEDPILTA FRLGWELKEL SKVENEFKAE YEELSQQCKL ENSTTRP00000014862/1-974 KALASPSLIA LSSEDPILTA FRLGWELKEL SKMENEFKAE YEELSQQCKL BACU011860/1-305 KALASPSLIA LSSEDPILTA FRLGWELKEL SKMENEFKAE YEELSQQCKL 251 300 ENSP00000262839/1-973 FAKDLLDQAR SSRELEIILN HRDDHSEELD PQKYHDLAKL KVAIKYHQKE bmy_14755T0/1-960 FAKDLLDQAR SSRELEIILN HRDDHSEELD PQKYHDLAKL KVAIKYHQKE ENSBTAP00000013270/1-974 FAKDLLDQAR SSRELEIILN HRDDHSEELD PQKYHDLAKL KVAIKYHQKE ENSTTRP00000014862/1-974 FAKDLLDQAR SSRELEIILN HRDDHSEELD PQKYHDLAKL KVAIKYHQKE BACU011860/1-305 FAKDLLDQAR SSRELEIILN HRDDHSEELD PQKYHDLAKL KVAIKYHQKE 301 350 ENSP00000262839/1-973 FVAQPNCQQL LATLWYDGFP GWRRKHWVVK LLTCMTIGFL FPMLSIAYLI bmy_14755T0/1-960 FVAQPNCQQL LATLWYDGFP GWRRKHWVVK LLTCMTIGFL FPMLSIAYLI ENSBTAP00000013270/1-974 FVAQPNCQQL LATLWYDGFP GWRRKHWVVK LLTCMTIGFL FPMLSIAYLI ENSTTRP00000014862/1-974 FVAQPNCQQL LATLWYDGFP GWRRKHWVVK LLTCMTIGFL FPMLSIAYLI BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000262839/1-973 SPRSNLGLFI KKPFIKFICH TASYLTFLFM LLLASQHIVR TDLHVQGPPP bmy_14755T0/1-960 SPRSNLGLFI KKPFIKFICH TASYLTFLFM LLLASQHIIR TDLHVQGPPP ENSBTAP00000013270/1-974 SPRSNLGLFI KKPFIKFICH TASYLTFLFM LLLASQHIVR TDLHVQGPPP ENSTTRP00000014862/1-974 SPRSNLGLFI KKPFIKFICH TASYLTFLFM LLLASQHIIR TDLHVQGPPP BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000262839/1-973 TVVEWMILPW VLGFIWGEIK EMWDGGFTEY IHDWWNLMDF AMNSLYLATI bmy_14755T0/1-960 TVVEWMILPW VLGFIWGEIK EMWDGGFTEY IHDWWNLMDF AMNSLYLATI ENSBTAP00000013270/1-974 TVVEWMILPW VLGFIWGEIK EMWDGGFTEY IHDWWNLMDF AMNSLYLATI ENSTTRP00000014862/1-974 TVVEWMILPW VLGFIWGEIK EMWDGGFTEY IHDWWNLMDF AMNSLYLATI BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000262839/1-973 SLKIVAYVKY NGSRPREEWE MWHPTLIAEA LFAISNILSS LRLISLFTAN bmy_14755T0/1-960 SLKIVAYVKY NGSRPREEWE MWHPTLIAEA LFAISNILSS LRLISLFTAN ENSBTAP00000013270/1-974 SLKIVAYVKY NGSRPREEWE MWHPTLIAEA LFAISNILSS LRLISLFTAN ENSTTRP00000014862/1-974 SLKIVAYVKY NGSRPREEWE MWHPTLIAEA LFAISNILSS LRLISLFTAN BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000262839/1-973 SHLGPLQISL GRMLLDILKF LFIYCLVLLA FANGLNQLYF YYETRAIDEP bmy_14755T0/1-960 SHLGPLQISL GRMLLDILKF LFIYCLVLLA FANGLNQLYF YYETRAIDEP ENSBTAP00000013270/1-974 SHLGPLQISL GRMLLDILKF LFIYCLVLLA FANGLNQLYF YYETRAIDEP ENSTTRP00000014862/1-974 SHLGPLQISL GRMLLDILKF LFIYCLVLLA FANGLNQLYF YYETRAIDEP BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000262839/1-973 NNCKGIRCEK QNNAFSTLFE TLQSLFWSVF GLLNLYVTNV KARHEFTEFV bmy_14755T0/1-960 NNCKGIRCEK QNNAFSTLFE TLQSLFWSVF GLLNLYVTNV KARHEFTEFV ENSBTAP00000013270/1-974 NNCKGIRCEK QNNAFSTLFE TLQSLFWSVF GLLNLYVTNV KARHEFTEFV ENSTTRP00000014862/1-974 NNCKGIRCEK QNNAFSTLFE TLQSLFWSVF GLLNLYVTNV KARHEFTEFV BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000262839/1-973 GATMFGTYNV ISLVVLLNML IAMMNNSYQL IADHADIEWK FARTKLWMSY bmy_14755T0/1-960 GATMFGTYNV ISLVVLLNML IAMMNNSYQL IADHADIEWK FARTKLWMSY ENSBTAP00000013270/1-974 GATMFGTYNV ISLVVLLNML IAMMNNSYQL IADHADIEWK FARTKLWMSY ENSTTRP00000014862/1-974 GATMFGTYNV ISLVVLLNML IAMMNNSYQL IAXXXXXXXX XXXXXXXXXX BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000262839/1-973 FDEGGTLPPP FNIIPSPKSF LYLGNWFNNT FCPKRDPDGR RRRRNLRSFT bmy_14755T0/1-960 FDEGGTLPPP FNIIPSPKSF LYLGNWFNNT FCPQRDPDGR RRRHNLRSFT ENSBTAP00000013270/1-974 FDEGGTLPPP FNIIPSPKSF LYLGNWFNNT FCPKRDPDGR RRRHNLRSFT ENSTTRP00000014862/1-974 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU011860/1-305 ---------- ---ANSP--- ---------- ---------- ---------- 701 750 ENSP00000262839/1-973 ERNADSLIQN QHYQEVIRNL VKRYVAAMIR NSKTHEGLTE ENFKELKQDI bmy_14755T0/1-960 ---------- ----EVIRNL VKRYVAAMIR NSKTNEGLTE ENFKELKQDI ENSBTAP00000013270/1-974 ERHADSLIQN QHYQEVIRNL VKRYVAAMIR NSKTNEGLTE ENFKELKQDI ENSTTRP00000014862/1-974 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXELKQDI BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000262839/1-973 SSFRYEVLDL LGNRKHP-RS FSTSSTELSQ RDDNNDGSGG ARAKSKSVSF bmy_14755T0/1-960 SSFRYEVLDL LGNRKHQRRS FSTSSTELSQ RDDTNDGSGG ARAKSKSVSF ENSBTAP00000013270/1-974 SSFRYEVLDL LGNRKHQRRS FSTSSTELSQ RDDTNDGSGG ARAKSKSVSF ENSTTRP00000014862/1-974 SSFRYEVLDL LGNRKHQRRS FSTSSTELSQ RDDTNDGSGG ARAKSKSVSF BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000262839/1-973 NLGCKKKTCH GPPLIRTMPR SSGAQGKSKA ESSSKRSFMG PSLKKLGLLF bmy_14755T0/1-960 NLGCKKKACH GPPLIRTMPR VGGAQGKSKA ESSSKRSFMG PSLKKLGLLF ENSBTAP00000013270/1-974 NVGCKKKACH GPPLIRTMPR VGGAQGKSKA ESSSKRSFMG PSLKKLGLLF ENSTTRP00000014862/1-974 NLGCKKKACH GPPLIRTMPR VGGAQGKSKA ESSSKRSFMG PSLKKLGLLF BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000262839/1-973 SKFNGHMSEP SSEPMYTISD GIVQQHCMWQ DIRYSQMEKG KAEACSQSEI bmy_14755T0/1-960 SKFNGHMSEP SSEPMYTISD GIVQPHYMWQ DIKYSQMEKG KAESCSQSEI ENSBTAP00000013270/1-974 SKFNGHMSEP SSEPMYTISD GIVQPHYMWQ DIRYSQMEKG KAEACSQSEI ENSTTRP00000014862/1-974 SKFNGHMSEP SSEPMYTISD GIVQPHYMWQ DIKYSQMEKG KAESCSQSEI BACU011860/1-305 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000262839/1-973 NLSEVELGEV QGAAQSSECP LACSSSLHCA SSICSSNSKL LDSSEDVFET bmy_14755T0/1-960 NLSEVELGEA RGAAQSSECP LACSSSLHCA SSICSSNSKL LDSSEDVFET ENSBTAP00000013270/1-974 NLSEVELGEA RGTAQSTECP LACSSSLHCV SSICSSNSKL LDSSEDVFET ENSTTRP00000014862/1-974 NLSEVELGEA RGAAQSSECP LARSSSLHCA SSICSSNSKL LDSSEDVFET BACU011860/1-305 ---------- ---------- ---------- ---C------ ---------- 951 1000 ENSP00000262839/1-973 WGEACDLLMH KWGDGQEEQV TTRL bmy_14755T0/1-960 WGEACDLLMH KWGDGQEEQV TTRL ENSBTAP00000013270/1-974 WGEACDLLMH KWGDGQEEQV TTRL ENSTTRP00000014862/1-974 WGEACDLLMH KWGDGQEEQV TTRL BACU011860/1-305 ---------- ---------- ----