KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:49:43 2014 Check: 00 .. Name: ENSBTAP00000013295/1-479 Len: 696 Check: 5423 Weight: 1.00 Name: bmy_05265T0/1-244 Len: 696 Check: 3143 Weight: 1.00 Name: BACU018104/1-606 Len: 696 Check: 6943 Weight: 1.00 Name: ENSP00000340299/1-485 Len: 696 Check: 7182 Weight: 1.00 Name: ENSTTRP00000000425/1-465 Len: 696 Check: 4933 Weight: 1.00 // 1 50 ENSBTAP00000013295/1-479 ---MNICNKP SNKTAPEKNV WTAPAQASGP SPELQGQRSR RNGWSWPPHP bmy_05265T0/1-244 ---------- ---------- ---------- ---------- ---------- BACU018104/1-606 ---------- ---------- ---------- ---------- ---------- ENSP00000340299/1-485 MYKMNICNKP SNKTAPEKSV WTAPAQPSGP SPELQGQRSR RNGWSWPPHP ENSTTRP00000000425/1-465 VYKMNICNKP SNKTAPEKNV WTAPAQASGP SPELQGQRSR RNGWSWPPHP 51 100 ENSBTAP00000013295/1-479 LQIVAWLLYL FFAVIGFGVL VPLLPHHWVP AGYACMGAIF AGHLVVHLTA bmy_05265T0/1-244 ---------- ---------- ---------- ---------- ---------- BACU018104/1-606 ---------- ---------- ---------- -----MGAIF AGHLVVHLTA ENSP00000340299/1-485 LQIVAWLLYL FFAVIGFGIL VPLLPHHWVP AGYACMGAIF AGHLVVHLTA ENSTTRP00000000425/1-465 LQIVAWLLYL FFAVIGFGVL VPLLPHHWVP AGYACMGAIF AGHLVVHLTA 101 150 ENSBTAP00000013295/1-479 VSIDPADANV RDKSYAGPLP IFNRSQHAHV IEDLHCNLCD VDVSARSKHC bmy_05265T0/1-244 ---------- MRLPTAGP-- ---------- ---------- ---------- BACU018104/1-606 VSIDPADANV RDKSYAGPLP IFNRSQHAHV IEDLHCNLCN VDVSARSKHC ENSP00000340299/1-485 VSIDPADANV RDKSYAGPLP IFNRSQHAHV IEDLHCNLCN VDVSARSKHC ENSTTRP00000000425/1-465 VSIDPADANV RDKSYAGPLP IFNRSQHAHV IEDLHCNLCD VDVSARSKHC 151 200 ENSBTAP00000013295/1-479 SACNKCVCGF DHHCKWLNNC VGERNYRLFL HSVASALLGV LLLVLVATYV bmy_05265T0/1-244 ---------- ---------- ------RLFL HSVASALLGV LLLVLVATYV BACU018104/1-606 SACNKCVCGF DHHCKWLNNC VGERNYRLFL HSVASALLGV LLLVLVATYV ENSP00000340299/1-485 SACNKCVCGF DHHCKWLNNC VGERNYRLFL HSVASALLGV LLLVLVATYV ENSTTRP00000000425/1-465 SACNKCVCGF DHHCKWLNNC VGERNYRLFL HSVASALLGV LLLVLVATYV 201 250 ENSBTAP00000013295/1-479 FVEFFVNPMR LRTNRHFEVL KNHTDVWFVF LPAAPVETQA PAILALAALL bmy_05265T0/1-244 FVEFFVNPMR LRTNRHFEVL KNHTDVWFVF LPAAPVETQA PAILALAALL BACU018104/1-606 FVEFFVNPMR LRTNRHFEVL KNHTDVWFVF LPAAPVETQA PAILALAALL ENSP00000340299/1-485 FVEFFVNPMR LRTNRHFEVL KNHTDVWFVF LPAAPVETQA PAILALAALL ENSTTRP00000000425/1-465 FVEFFVNPMQ LRTNRHFEVL KNHTDVWFVF LPAAPVETQA PAILALAALL 251 300 ENSBTAP00000013295/1-479 ILLGLLSTAL LGHLLCFHIY LMWHKLTTYE YIVQHRPPQE AKGAHRELES bmy_05265T0/1-244 ILLGLLSTAL LGHLLCFHIY LMWHKLTTYE YIVQHRPPQE AKGAHREXES BACU018104/1-606 ILLGLLSTAL LGHLLCFHIY LMWHKLTTYE YIVQHRPPQE AKGAHRELES ENSP00000340299/1-485 ILLGLLSTAL LGHLLCFHIY LMWHKLTTYE YIVQHRPPQE AKGVHRELES ENSTTRP00000000425/1-465 ILLGLLSTAL LGHLLCFHIY LMWHKLTTYE YIVQHRPPQE AKGAHRELES 301 350 ENSBTAP00000013295/1-479 CPPKMRPIQE MELYMRTFSH VRPEPPGQAR PAAVNANPSR FLATRGQVEP bmy_05265T0/1-244 CPPRMRPIQE MEFYMRTFSH VRPEPPGQAR PASVNANPSR FLATRGHVEP BACU018104/1-606 CPPRMRPIQE MEFYMRTFSH VRPEPPGQAR PASVNANPSR FLATRGHVEP ENSP00000340299/1-485 CPPKMRPIQE MEFYMRTFRH MRPEPPGQAG PAAVNAKHSR -------PAS ENSTTRP00000000425/1-465 CPPRMRPIQE MEFYMRTFSH VRPEPPGQAR PASVNAKDSR -------SAP 351 400 ENSBTAP00000013295/1-479 PPPSSPETLA LRPRIQPQKK RKRRM-YKVP TSGTLNREPQ L-PRLPGPRT bmy_05265T0/1-244 PPPSSPETLA LTPRIRPQKK RKRRM-YKVP TSRTLDREPP L-PRLPGER- BACU018104/1-606 PPPSSPETLA LPPRIRPQKK RKRRM-YKVP TSRTLDREPP L-PRLPGPRT ENSP00000340299/1-485 PDPTPGRRDC AGPPVQVEWD RKKPLPWRSP LLLLAMWGPQ APPCLCRKRG ENSTTRP00000000425/1-465 PDPTPGRGDC AGPPAQVEGD GKKPLPLSTP -ARLLAMGPQ ASPCLCRKKG 401 450 ENSBTAP00000013295/1-479 PGRRSSSSSD SADASPAEAY HSASGESLDE IPVAQTRLGS AALAAPVGRP bmy_05265T0/1-244 ---------- ---------- ---------- ---------- -----PFLTG BACU018104/1-606 PGRRSSSSSD SADASPAGAY HSASAESMDE IPVAQTRLGS AGLAAPVGRG ENSP00000340299/1-485 RGACIKCERL RPRIRRRGLG PPAAAPARRR IPRTPALCTP LALPAPTTRR ENSTTRP00000000425/1-465 SGACIRYGPP EPWTGCRGRG PPAAALARRR IPLTP----- -ALQAPTTRR 451 500 ENSBTAP00000013295/1-479 REP---GLAL QARAPAVFVS PSSG------ ----EP---- -RA------- bmy_05265T0/1-244 S--------- ---------- ---------- ---CSG---- -SY------- BACU018104/1-606 REP---RLAL QARAPAVFQI VTRSQLGQLH PCLCSGSLLS LGWVLLGPHD ENSP00000340299/1-485 RQSPWTRFQW RRRAWAAPLW PPRG------ AGADSP---- -RW------- ENSTTRP00000000425/1-465 QPSPWTRFQW LRRA------ ---------- ---AAP---- -GW------- 501 550 ENSBTAP00000013295/1-479 ---------- ---------- ---------- ---------- ---------- bmy_05265T0/1-244 ---------- ---------- ---------- ---------- ---------- BACU018104/1-606 PERDTVLTKY LPNQQPGLGG MAASTDVAGL EESFRKFAIH GDPKASGHEM ENSP00000340299/1-485 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000425/1-465 ---------- ---------- ---------- ---------- ---------- 551 600 ENSBTAP00000013295/1-479 ---------- ---------- ---------- ---------- ---------- bmy_05265T0/1-244 ---------- ---------- ---------- ---------- ---------- BACU018104/1-606 NGKNWAKLCK DCKVADGKAV TGTDVDIVFS KVKGKSARVI NYEEFKKALE ENSP00000340299/1-485 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000425/1-465 ---------- ---------- ---------- ---------- ---------- 601 650 ENSBTAP00000013295/1-479 -------RGG PEADLA---- ---------- ---------- ---------- bmy_05265T0/1-244 -------EGG K--------- ---------- ---------- ---------- BACU018104/1-606 ELAPKRFKGK SKEEAFDAIC QLVAGKEPAN VGVTKAKTGG AVERLTDTSK ENSP00000340299/1-485 -------RGR RVRPPFS--- ---------- ---------- ---------- ENSTTRP00000000425/1-465 -------RCR RVRRPFS--- ---------- ---------- ---------- 651 700 ENSBTAP00000013295/1-479 ---------- ---------- ---------- ---------- ------ bmy_05265T0/1-244 ---------- ---------- ---------- ---------- ------ BACU018104/1-606 YTGSHKERFD ESGKGKGIAG RQDILDDSGY VSAYKNAGTY DAKVKK ENSP00000340299/1-485 ---------- ---------- ---------- ---------- ------ ENSTTRP00000000425/1-465 ---------- ---------- ---------- ---------- ------