KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:16 2014 Check: 00 .. Name: ENSP00000474720/1-558 Len: 571 Check: 3357 Weight: 1.00 Name: ENSBTAP00000013340/1-543 Len: 571 Check: 6654 Weight: 1.00 Name: bmy_21335T0/1-509 Len: 571 Check: 1241 Weight: 1.00 Name: BACU012827/1-491 Len: 571 Check: 3829 Weight: 1.00 Name: ENSTTRP00000003969/1-556 Len: 571 Check: 8620 Weight: 1.00 // 1 50 ENSP00000474720/1-558 MVDSGTEARA -RGKAEAGLQ DGISGPATAR VNGKTQAEAV AEAELKTESV ENSBTAP00000013340/1-543 -------GKG -RGGPEVGLK AGIRGPANTK AKAKIQAKAV AEAELKTGLV bmy_21335T0/1-509 ---------- ---------- ---------- -----MAKCA TVLPLRLRKW BACU012827/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003969/1-556 --MTGFEAKA RRGGAGAGLK AGICGPANTR AKAKIHAKAV AETESETGPV 51 100 ENSP00000474720/1-558 TQAKAGDGAM TRTHTVTYRE AMAVTREVIK VEDTTKTRVM VETKTKPLAE ENSBTAP00000013340/1-543 TQAKAGDRAV AR--TVTYAE AMALTRRVSK MESKTKTRVM AETKATPLTE bmy_21335T0/1-509 QCGRKNDD-- ----TGTDRS AFRSAVGLVI IGNKERRRKL LQIREGPTSV BACU012827/1-491 ---------- ---------- ---------- MEAKTKTRVV AETKADPPTE ENSTTRP00000003969/1-556 TQAKPGDGAM ARIQAVTYTE AVP-TREVSK MEAKTKTRVV AETKADPPTE 101 150 ENSP00000474720/1-558 RSIVPQTKSK AMPMSRVSTV TKSEVKVVAV IEANIRSYAK SHDKANTGSR ENSBTAP00000013340/1-543 PSVVSQTKSK AMPMSRLSAV THYKVKAGAG REANIGS--- ---KDNIGSR bmy_21335T0/1-509 ADLVALEWLK TTTLHR---- -------AAL RHTAILPFPE ---------- BACU012827/1-491 PGIVSQTKSK AMPMSRVSAV TKYEVKAGAG SEANIRSFAK ADDKDNIGSR ENSTTRP00000003969/1-556 PGIVSQTKSK AMPMSRVSAV TKYEVKAGAG SEVNIRSFAK ADGKDNIGSR 151 200 ENSP00000474720/1-558 PDRREETSIG MK-------- --SSDEDEEN ICSWFWTGEE PSVGSWFWPE ENSBTAP00000013340/1-543 SQRRSKASIK LK-------- --FSDEDGKN VCSWFWTGEE PSVGSWFWPK bmy_21335T0/1-509 SQRRREASIK LRVGDRAGIV IESSDEAEEN VCSWFWTGEE PSVGSWFWPE BACU012827/1-491 SQRRREASIK LRVGDRAGIV IESSDEAEEN VCSWFWTGEE PSVGSWFWPE ENSTTRP00000003969/1-556 SQRRREASIK LK-------- --SSDEAEEN VCSWFWTGEE PSVGSWFWPE 201 250 ENSP00000474720/1-558 EETSLQVYKP LPKIQEKPK- -PTHKPTLTI KQKVIAWSRA RYIVLVPVEG ENSBTAP00000013340/1-543 EDNPFQVYKP PAKIQEMPK- -PTPKPELTV KQKAKAWSRA RFCVLVPVDG bmy_21335T0/1-509 EETPFQVYKP LRKIQEKPKP TPKPKPELTI KQKAAAWSRA RFCVLVPVEG BACU012827/1-491 EETPFQVYKP PRKIQEKPRP TPKPKPELTI KQKAAAWSRA RFCVLVPVEG ENSTTRP00000003969/1-556 EETPFQVYKP PRKIQEKPK- -PKPKPELTI KQKAAAWSRA RFCVLVPVEG 251 300 ENSP00000474720/1-558 GEQSLPPEGN WTLVETLIET PLGIRPLTKI PPYHGPYYQT LAEIKKQIRQ ENSBTAP00000013340/1-543 GEQSLPPGGN WTLVDTLIET PLGIRPLTKI PPCNGPYFQT LAELKNQVKC bmy_21335T0/1-509 GERSLPPEGN WTLVETLIET PLGIRPLTKI PPYNGPYFQT LAELKKQVKY BACU012827/1-491 GERSLPPEGN WTLVETLIET PLGIRPLTKI PPYNGPYFQT LAELKKQVKY ENSTTRP00000003969/1-556 GERSLPPEGN WTLVETLIET PLGIRPLTKI PPYNGPYFQT LAELKKQVKY 301 350 ENSP00000474720/1-558 REKYGPNPKA CHCKSRGFSL EPKEFDKLVA LLKLTKDPFI HEIATMIMGI ENSBTAP00000013340/1-543 REKYRPNPKT CRCKSHVFSL EPKEFDKLVA LLKLTRDPFI HEIATMIMGI bmy_21335T0/1-509 REKYGPNPKA CRCKSRVFSL EPKEFDKLVA LLKLTRDPFI HEIATMIMGI BACU012827/1-491 REKYGPNPKA CRCKSRVFSL EPKEFDKLVA LLKLTRDPFI HEIATMIMGI ENSTTRP00000003969/1-556 REKYGPNPKA CRCKSHVFSL EPKEFDKLVA LLKLTRDPFI HEIATMIMGI 351 400 ENSP00000474720/1-558 SPAYPFTQDI IHDVGITVMI ENLVNNPNVK EHPGALSMVD DSSESSEEPK ENSBTAP00000013340/1-543 SPAYPFTQDI IHDVGITVMI ENLVNNPNVN EHPRTLNMVD DSSEFSGEPQ bmy_21335T0/1-509 SPAYPFTQDI IHDVGITVMI ENLVNNPNVK EHPRTLNMVD DNSESSGEPK BACU012827/1-491 SPAYPFTQDI IHDVGITVMI ENLVNNPNVK EHPRTLNMVD DNSESSGEPK ENSTTRP00000003969/1-556 SPAYPFTQDI IHDVGITVMI ENLVNNPNVK EHPRTLNMVD DNSESSGEPK 401 450 ENSP00000474720/1-558 SGESYIHQVC KGIISCPLNS PVQLAGLKLL GHLSIKFEDH YVITSYIPDF ENSBTAP00000013340/1-543 IGELYINQVC RDIIAYPLNS TMQLDGLKLL VQLSVRFEYH HIILNYILDF bmy_21335T0/1-509 TGESYVNQVC KDIISYTLNS PEQLAGLKLL VQLSVKFEDH HMIVNYIPDF BACU012827/1-491 TGESYVNQVC KDIISYTLNS PEQLAGLKLL VQLSVKFEDH HMIVNYIPDF ENSTTRP00000003969/1-556 TGESYVNQVC KDIISFPLNS PEQLAGLKLL VQLSVKFEDH HMIVNYIPDI 451 500 ENSP00000474720/1-558 LTLLNKGSVK TKFYVLKVFS CLSKNHANTR ELISAKVLSS LVAPFNKNES ENSBTAP00000013340/1-543 LTLLNKGSVK TKLYVLKVCL HLSKNQANTR ELISAKVLSS LVAPFNKNES bmy_21335T0/1-509 LALLNKGSGK TKFYVLKVFS RLSKNQANTR ELISAKVLSS LVAPFNKNES BACU012827/1-491 LTLLNKGSGK TKFYVLKVFS RLSKNQANTR ELISAKVLSS LVAPFNKNES ENSTTRP00000003969/1-556 LTLLNKGSGK TKFYVLKVFS RLSKNQANTR ELISAKVLSS LVAPFNKNES 501 550 ENSP00000474720/1-558 KANILNIIEI FENINFQFKT KAKLFTKEKF TKSELISIFQ EAKQFGQKLQ ENSBTAP00000013340/1-543 KASILNIIEI FENINFQFKK KVKLFTKEEF TKYELISIFE GAKEFGQKLQ bmy_21335T0/1-509 KANILNIIEI FENINFQFKK KVKLFTKEEF TKSELISIFQ EAKEFGQKLQ BACU012827/1-491 KANILNIIEI FENINFQFKK KVKLFTKEEF TKSELISIFQ EAKEFGQKLQ ENSTTRP00000003969/1-556 KANILNTIEI FENINFQFKK KVKLFTKEEF TKSELISIFQ EAKQFGQKLQ 551 600 ENSP00000474720/1-558 DLAEHSDPEV RDKVIRLILK L ENSBTAP00000013340/1-543 DLAEHSDPEV RDKVIRLILK L bmy_21335T0/1-509 DLAEHSDPEV RDKVIRLILK L BACU012827/1-491 DLAEHSDPEV RDKVIRLILK L ENSTTRP00000003969/1-556 DLAEHSDPEV RDKVIRLILK L