KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:18 2014 Check: 00 .. Name: bmy_07708T0/1-319 Len: 614 Check: 9254 Weight: 1.00 Name: ENSBTAP00000013358/1-501 Len: 614 Check: 2586 Weight: 1.00 Name: ENSTTRP00000002211/1-518 Len: 614 Check: 5263 Weight: 1.00 Name: ENSP00000249750/1-518 Len: 614 Check: 6483 Weight: 1.00 Name: BACU001008/1-614 Len: 614 Check: 895 Weight: 1.00 // 1 50 bmy_07708T0/1-319 ---------- ---------- ---------- ---MFKFKR- ---------- ENSBTAP00000013358/1-501 ETNWKVT--- ---------- ---GLFPLPT QQ-KVIYQQ- ---------- ENSTTRP00000002211/1-518 MTSSKIEMPG EVKADPAALM ASLHLLPSPT PNLEIKYTK- ---------- ENSP00000249750/1-518 MTSSKIEMPG EVKADPAALM ASLHLLPSPT PNLEIKYTK- ---------- BACU001008/1-614 MTSSKIEMPG EVKADPAALM ASLHLLPSPT PNLEIKYTKQ RDNTPSSALG 51 100 bmy_07708T0/1-319 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013358/1-501 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002211/1-518 ---------- ---------- ---------- ---------- ---------- ENSP00000249750/1-518 ---------- ---------- ---------- ---------- ---------- BACU001008/1-614 LLKSCRDLGT RRGLAPACRA ALRVAVNGSF PNRICRCLLV EFSASRLLRG 101 150 bmy_07708T0/1-319 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013358/1-501 ---------- ---------- ---------- -----IFINN EWQNSESGRV ENSTTRP00000002211/1-518 ---------- ---------- ---------- -----IFINN EWQNSESGRV ENSP00000249750/1-518 ---------- ---------- ---------- -----IFINN EWQNSESGRV BACU001008/1-614 RRRHRFHSSK GGLVLSLMKP KSSPQKDVLL ASIRQIFINN EWQNSESGRV 151 200 bmy_07708T0/1-319 ---------- ---------- ---------K AISF------ ---------- ENSBTAP00000013358/1-501 FPVYNPATGE QVCEVQEADK ADIDKAVQAA RLAFSLGSVW RRMDASERGR ENSTTRP00000002211/1-518 FPVYNPATGE QVCEVQEADK ADIDKAVQAA RLAFSLGSVW RRMDASERGR ENSP00000249750/1-518 FPVYNPATGE QVCEVQEADK ADIDKAVQAA RLAFSLGSVW RRMDASERGR BACU001008/1-614 FPVYNPATGE QVCEVQEADK ADIDKAVQAA RLAFSLGSVW RRMDASERGR 201 250 bmy_07708T0/1-319 ---------- KDYITLT--- -------YIQ A---KLISIY KTIQWFV-IS ENSBTAP00000013358/1-501 LLDKLADLVE RDRAVLATME SLNGGKPFLQ AFYVDLQGVI KTLRYYAGWA ENSTTRP00000002211/1-518 LLDKLADLVE RDRAVLATME SLNGGKPYLQ AFYVDLQGVI KTLRYXXXXX ENSP00000249750/1-518 LLDKLADLVE RDRAVLATME SLNGGKPFLQ AFYVDLQGVI KTFRYYAGWA BACU001008/1-614 LLDKLADLVE RDRAVLATME SLNGGKPFLQ AFYVDLQGVI KTLRYYAGWA 251 300 bmy_07708T0/1-319 KGYLGNCIDS SRGYMS---- ---------- ------LKYG FE------CG ENSBTAP00000013358/1-501 DKIHGMTIPV DGDYFTFTRH EPIGVCGQII PWNFPLLMFA WKIAPALCCG ENSTTRP00000002211/1-518 XXXXXXXXXV DGDYFTFTRH EPVGVCGQII PWNFPLLMFA WKIAPALCCG ENSP00000249750/1-518 DKIHGMTIPV DGDYFTFTRH EPIGVCGQII PWNFPLLMFA WKIAPALCCG BACU001008/1-614 DKIHGMTIPV DGDYFTFTRH EPIGVCGQII PWNFPLLMFA WKIAPALCCG 301 350 bmy_07708T0/1-319 SS-------- ---------- ---------- -----NDY-P SRGDLFIHH- ENSBTAP00000013358/1-501 NTVVIKPAEQ TPLSALYMGA LIKEAGFPPG VINILPGYGP TAGAAIASHV ENSTTRP00000002211/1-518 NTVVIKPAEQ TPLSALYMGA LIKEAGFPPG VINILPGYGP TAGAAIASHV ENSP00000249750/1-518 NTVVIKPAEQ TPLSALYMGA LIKEAGFPPG VINILPGYGP TAGAAIASHI BACU001008/1-614 NTVVIKPAEQ TPLSALYMGA LIKEAGFPPG VINILPGYGP TAGAAIASHV 351 400 bmy_07708T0/1-319 -----KMSGT --VGKLIQEA AGRSNLKRVT LELGGKSPNI IFADADLDHA ENSBTAP00000013358/1-501 GIDKIAFTGS TEVGKLIQEA AGRSNLKRVT LELGGKSPNI IFADADLDYA ENSTTRP00000002211/1-518 GIDKIAFTGS TEVGKLIQEA AGRSNLKRVT LELGGKSPNI IFADADLDYA ENSP00000249750/1-518 GIDKIAFTGS TEVGKLIQEA AGRSNLKRVT LELGGKSPNI IFADADLDYA BACU001008/1-614 GIDKIAFTGS TEVGKLIQEA AGRSNLKRVT LELGGKSPNI IFADADLDHA 401 450 bmy_07708T0/1-319 VEQAHQGVFF NQGQCCTAGS RIFVEESIYE EFVRRSVERA KRRV------ ENSBTAP00000013358/1-501 VEQAHQGVFF NQGQCCTAGS RIFVEESIYE EFVRRSVERA KRRIVGSPFD ENSTTRP00000002211/1-518 VEQAHQGVFF NQGQCCTAGS RIFVEESIYE EFVRRSVERA KRRIVGSPFD ENSP00000249750/1-518 VEQAHQGVFF NQGQCCTAGS RIFVEESIYE EFVRRSVERA KRRVVGSPFD BACU001008/1-614 VEQAHQGVFF NQGQCCTAGS RIFVEESIYE EFVRRSVERA KRRVVGSPFD 451 500 bmy_07708T0/1-319 --------ID KKQYNRILEL IQSGVAEGAK LECGGKGLGR KGFFIEPTVF ENSBTAP00000013358/1-501 PTTEQGPQID KKQYNKILEL IQSGVAEGAK LECGGKGLGR KGFFIEPTVF ENSTTRP00000002211/1-518 PTTEQGPQID KKQYNRILEL IQSGVAEGAK LECGGKGLGR KGFFIEPTVF ENSP00000249750/1-518 PTTEQGPQID KKQYNKILEL IQSGVAEGAK LECGGKGLGR KGFFIEPTVF BACU001008/1-614 PTTEQGPQID KKQYNRILEL IQSGVAEGAK LECGGKGLGR KGFFIEPTVF 501 550 bmy_07708T0/1-319 SNVTDDMRIA KEEIFGPVQE ILRFKTMDEV IERANNSDFG LVAAVFTNDI ENSBTAP00000013358/1-501 SNVTDDMRIA KEEIFGPVQE ILRFKTMDEV IERANNSDFG LVAAVFTNDI ENSTTRP00000002211/1-518 SNVTDDMRIA KEEIFGPVQE ILRFKTMDEV IERANNSDFG LVAAVFTNDI ENSP00000249750/1-518 SNVTDDMRIA KEEIFGPVQE ILRFKTMDEV IERANNSDFG LVAAVFTNDI BACU001008/1-614 SNVTDDMRIA KEEIFGPVQE ILRFKTMDEV IERANNSDFG LVAAVFTNDI 551 600 bmy_07708T0/1-319 NKALTVSSAM QAGTVWINCY NALNAQSPFG GFKMSGNGRE MGEFGLREYS ENSBTAP00000013358/1-501 NKALTVSSAM QAGTVWINCY NALNAQSPFG GFKMSGNGRE MGEFGLREYS ENSTTRP00000002211/1-518 NKALTVSSAM QAGTVWINCY NALNAQSPFG GFKMSGNGRE MGEFGLREYS ENSP00000249750/1-518 NKALTVSSAM QAGTVWINCY NALNAQSPFG GFKMSGNGRE MGEFGLREYS BACU001008/1-614 NKALTVSSAM QAGTVWINCY NALNAQSPFG GFKMSGNGRE MGEFGLREYS 601 650 bmy_07708T0/1-319 EVKTVTVKIP QKNS ENSBTAP00000013358/1-501 EVKTVTVKIP QKNS ENSTTRP00000002211/1-518 EVKTVTVKIP QKNS ENSP00000249750/1-518 EVKTVTVKIP QKNS BACU001008/1-614 EVKTVTVKIP QKNS