KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:19 2014 Check: 00 .. Name: ENSBTAP00000013362/1-645 Len: 875 Check: 7375 Weight: 1.00 Name: ENSP00000361486/1-704 Len: 875 Check: 7736 Weight: 1.00 Name: bmy_06253T0/1-875 Len: 875 Check: 7717 Weight: 1.00 Name: BACU011373/1-697 Len: 875 Check: 7111 Weight: 1.00 Name: ENSTTRP00000011475/1-704 Len: 875 Check: 9796 Weight: 1.00 // 1 50 ENSBTAP00000013362/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000361486/1-704 ---------- ---------- ---------- ---------- ---------- bmy_06253T0/1-875 MEQQGRTAGR GGGPQQAGSK ESACPATLNM AARQRRGPSE AVPAHAQREV BACU011373/1-697 ----MRSAES RPGTQDGGS- ---------- ---------- ---------- ENSTTRP00000011475/1-704 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000013362/1-645 ---------- ---------- ---------- ---------- ---------- ENSP00000361486/1-704 ---------- ---------- ---------- ---------- ---------- bmy_06253T0/1-875 PARDTRWRQR RWGGRGGGGK TGGRAERVAA SPRVRCGQES PGLPSTPLLT BACU011373/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011475/1-704 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000013362/1-645 ---------- ---------- ---------- ---------- ------MANE ENSP00000361486/1-704 ---------- ---------- ---------- ---------- ------MANE bmy_06253T0/1-875 SPHACTARFP AGLPTASVGP GGPSGRRRKP SHASVADPRG SGVGAEMANE BACU011373/1-697 ---------- ------GVGE GEAEAAKR-- ----AVEQNV SGVGAEMANE ENSTTRP00000011475/1-704 ---------- ---------- ---------- ---------- ------MANE 151 200 ENSBTAP00000013362/1-645 NHGSPREEAS LLSHSPGTSS QSQPCSPKPI RLVQDLPEEL VHAGWEKCWS ENSP00000361486/1-704 NHGSPREEAS LLSHSPGTSN QSQPCSPKPI RLVQDLPEEL VHAGWEKCWS bmy_06253T0/1-875 NHGSPREEAS LLSHSPGTSN QSQPCSPKPI RLVQDLPEEL VHAGWEKCWS BACU011373/1-697 NHGSPREEAS LLSHSPGTSN QSQPCSPKPI RLVQDLPEEL VHAGWEKCWS ENSTTRP00000011475/1-704 NHGSPREEAS LLSHSPGTSN QSQPCSPKPV RLVQDLPEEL VHAGWEKCWS 201 250 ENSBTAP00000013362/1-645 RRENRPYYFN RFTNQSLWEM PVLGQHDVIS DPLGLNATPL PQDSSLVETP ENSP00000361486/1-704 RRENRPYYFN RFTNQSLWEM PVLGQHDVIS DPLGLNATPL PQDSSLVETP bmy_06253T0/1-875 RRENRPYYFN RFTNQSLWEM PVLGQHDVIS DPLGLNATPL PQDSSLVETP BACU011373/1-697 RRENRPYYFN RFTNQSLWEM PVLGQHDVI- ---------- ---------- ENSTTRP00000011475/1-704 RRENRPYYFN RFTNQSLWEM PVLGQHDVIS DPLGLNATPL PQDSSLVEPP 251 300 ENSBTAP00000013362/1-645 LAENKPRKRQ LSEEQPSGNG VKKPKIEIPM TPTGPSVPSS PSIPGTPTLK ENSP00000361486/1-704 PAENKPRKRQ LSEEQPSGNG VKKPKIEIPV TPTGQSVPSS PSIPGTPTLK bmy_06253T0/1-875 PAENKPRKRQ LSEEQPSGNG VKKPKIEIPM TPTGPSVPSS PSVPGTPTLK BACU011373/1-697 ---------- ---------- -----IEIPM TPTGPSVPSS PSVPGTPTLK ENSTTRP00000011475/1-704 PAENKPRKRQ LSEEQPSGNG VKKPKIDIPM TPTGPSVPSS PSVPGTPTLK 301 350 ENSBTAP00000013362/1-645 IWGTSPEDKQ QAALLRPTEV YWDLDIQTNA VIKHRGPSEV LPPHPEVELL ENSP00000361486/1-704 MWGTSPEDKQ QAALLRPTEV YWDLDIQTNA VIKHRGPSEV LPPHPEVELL bmy_06253T0/1-875 MWGTSPEDKQ QAALLRPTEV YWDLDIQTNA VIKHRGPSEV LPPHPEVELL BACU011373/1-697 IWGTSPEDKQ QAALLRPTEV YWDLDIQTNA VIKHRGPSEV LPPHPEVELL ENSTTRP00000011475/1-704 IWGTSPEDKQ QAALLRPTEV YWDLDIQTNA VIKHRGPSEV LPPHPEVELL 351 400 ENSBTAP00000013362/1-645 RSQLILKLRQ HYRELCQQRE GIEPPRESFN RWMLERKVVD KGSDPLLPSN ENSP00000361486/1-704 RSQLILKLRQ HYRELCQQRE GIEPPRESFN RWMLERKVVD KGSDPLLPSN bmy_06253T0/1-875 RSQLILKLRQ HYRELCQQRE GIEPPRESFN RWMLERKVVD KGSDPLLPSN BACU011373/1-697 RSQLILKLRQ HYRELCQQRE GIEPPRESFN RWMLERKVVD KGSDPLLPSN ENSTTRP00000011475/1-704 RSQLILKLRQ HYRELCQQRE GIEPPRESFN RWMLERKVVD KGSDPLLPSN 401 450 ENSBTAP00000013362/1-645 CEPVVSPSMF REIMNDIPIR LSRIKFREEA KRLLFKYAEA ARRLIESRSA ENSP00000361486/1-704 CEPVVSPSMF REIMNDIPIR LSRIKFREEA KRLLFKYAEA ARRLIESRSA bmy_06253T0/1-875 CEPVVSPSMF REIMNDIPIR LSRIKFREEA KRLLFKYAEA ARRLIESRSA BACU011373/1-697 CEPVVSPSMF REIMNDIPIR LSRIKFREEA KRLLFKYAEA ARRLIESRSA ENSTTRP00000011475/1-704 CEPVVSPSMF REIMNDIPIR LSRIKFREEA KRLLFKYAEA ARRLIESRSA 451 500 ENSBTAP00000013362/1-645 SPDSRKVVKW NVEDTFSWLR KDHSASKEDY MDRLEHLRRQ CGPHVSAAAK ENSP00000361486/1-704 SPDSRKVVKW NVEDTFSWLR KDHSASKEDY MDRLEHLRRQ CGPHVSAAAK bmy_06253T0/1-875 SPDSRKVVKW NVEDTFSWLR KDHSASKEDY MDRLEHLRRQ CGPHVSAAAK BACU011373/1-697 SPDSRKVVKW NVEDTFSWLR KDHSASKEDY MDRLEHLRRQ CGPHVSAAAK ENSTTRP00000011475/1-704 SPDSRKVVKW NVEDTFSWLR KDHSASKEDY MDRLEHLRRQ CGPHVSAAAK 501 550 ENSBTAP00000013362/1-645 DSVEGICSKI YHISLEYVKR IREKHLAILK ENNIPEEVEA PEVEPRLVYC ENSP00000361486/1-704 DSVEGICSKI YHISLEYVKR IREKHLAILK ENNISEEVEA PEVEPRLVYC bmy_06253T0/1-875 DSVEGICSKI YHISLEYVKR IREKHLAILK ENNIPEEVEA PEVEPRLVYC BACU011373/1-697 DSVEGICSKI YHISLEYVKR IREKHLAILK ENNIPEEVEA PEVEPRLVYC ENSTTRP00000011475/1-704 DSVEGICSKI YHISLEYVKR IREKHLAILK ENNIPEEVEA PEVEPRLVYC 551 600 ENSBTAP00000013362/1-645 YPVRLAVPAP PMPSVEMHVE NSVVCVRYKG EMVKVSRNYF SKLWLLYRYS ENSP00000361486/1-704 YPVRLAVSAP PMPSVEMHME NNVVCIRYKG EMVKVSRNYF SKLWLLYRYS bmy_06253T0/1-875 YPVRLAVSAP PMPSVEMHVE NNVVCIRYKG EMVKVSRNYF SKLWLLYRYS BACU011373/1-697 YPVRLAVSAP PMPSVEMHVE NNVVCIRYKG EMVKVSRNYF SKLWLLYRYS ENSTTRP00000011475/1-704 YPVRLAVSAP PMPSVEMHVE NNVVCIRYKG EMVKVSRNYF SKLWLLYRYS 601 650 ENSBTAP00000013362/1-645 CIDDSAFERF LPRVWCLLRR YQMMFGVGLY EGTGLQGSLP VHVFEALHRL ENSP00000361486/1-704 CIDDSAFERF LPRVWCLLRR YQMMFGVGLY EGTGLQGSLP VHVFEALHRL bmy_06253T0/1-875 CIDDSAFERF LPRVWCLLRR YQMMFGVGLY EGTGLQGSLP VHVFEALHRL BACU011373/1-697 CIDDSAFERF LPRVWCLLRR YQMMFGVGLY EGTGLQGSLP VHVFEALQRL ENSTTRP00000011475/1-704 CIDDSAFERF LPRVWCLLRR YQMMFGVGLY EGTGLQGSLP VHVFEALHRL 651 700 ENSBTAP00000013362/1-645 FGVSFECFAS PLNCYFRQYC SAFPDTDGYF GSRGPCLDFS PLSGSFEANP ENSP00000361486/1-704 FGVSFECFAS PLNCYFRQYC SAFPDTDGYF GSRGPCLDFA PLSGSFEANP bmy_06253T0/1-875 FGVSFECFAS PLNCYFRQYC SAFPDTDGYF GSRGPCLDFS PLSGSFEANP BACU011373/1-697 FGVSFECFAS PLNCYFRQYC SAFPDTDGYF GSRGPCLDFS PLSGSFEANP ENSTTRP00000011475/1-704 FGVSFECFAS PLNCYFRQYC SAFPDTDGYF GSRGPCLDFS PLSGSFEANP 701 750 ENSBTAP00000013362/1-645 PFCEELMDAM VSHFE----- ---------- ---------- KLLESSPEPL ENSP00000361486/1-704 PFCEELMDAM VSHFE----- ---------- ---------- RLLESSPEPL bmy_06253T0/1-875 PFCEELMDAM VSHFEVRVSP RVGGGEQDGR PLEGKALMAT KLLESSPEPL BACU011373/1-697 PFCEELMDAM VSHFE----- ---------- ---------- KLLESSPEPL ENSTTRP00000011475/1-704 PFCEELMDAM VSHFE----- ---------- ---------- KLLESSPEPL 751 800 ENSBTAP00000013362/1-645 SFIVFIPEWR EPPTPALTRM EQSRFKRHQL VLPAFEHEYR SGSQHVCKK- ENSP00000361486/1-704 SFIVFIPEWR EPPTPALTRM EQSRFKRHQL ILPAFEHEYR SGSQHICKKE bmy_06253T0/1-875 SFIVFIPEWR EPPTPALTRM EQSHFKRHQL VLPAFEHEYR SGSQHVCKKE BACU011373/1-697 SFIVFIPEWR EPPTPALTRM EQSRFKRHQL VLPAFEHEYR SGSQHVCKKE ENSTTRP00000011475/1-704 SFIVFIPEWR EPPTPALTRM EQSRFKRHQL VLPAFEHEYR SGSQHVCKKE 801 850 ENSBTAP00000013362/1-645 ---------- ------TSPA SPSGGP---- ---------- ----HLSGCR ENSP00000361486/1-704 EMHYKAVHNT AVLFLQNDPG FAKWAPTPER LQELSAAYRQ SGRSHSSGSS bmy_06253T0/1-875 EMHYKAVHST AVLFLQNDPG FAKWGPTPER LQELSAAYRQ SGRSHGSVGS BACU011373/1-697 EMHYKAVHST AVLFLQNDPG FAKWGPTPER LQELSAAYRQ SGRSHGSVGS ENSTTRP00000011475/1-704 EMHYKAVHST AVLFLQNDPG FAKWGPTPER LQELSAAYRQ SGRSHGSVGS 851 900 ENSBTAP00000013362/1-645 S--------- ---------- ----- ENSP00000361486/1-704 SSSSSEAKDR DSGREQGPSR EPHPT bmy_06253T0/1-875 SSSSSEAKDR DSGREQGPSR EPHST BACU011373/1-697 SSSSSEAKDR DSGREQGPSR EPHST ENSTTRP00000011475/1-704 SSSSSEAKDR DSGREQGPSR EPHST