KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:20 2014 Check: 00 .. Name: ENSBTAP00000013373/1-436 Len: 437 Check: 6801 Weight: 1.00 Name: ENSTTRP00000004553/1-433 Len: 437 Check: 26 Weight: 1.00 Name: ENSP00000229329/1-434 Len: 437 Check: 2647 Weight: 1.00 Name: bmy_06516T0/1-434 Len: 437 Check: 458 Weight: 1.00 Name: BACU016344/1-379 Len: 437 Check: 6140 Weight: 1.00 // 1 50 ENSBTAP00000013373/1-436 MDSVEKGAAT SVSNPRGRPS RGRPPKLQRN SRGGQGRGVE KPPHMAALIL ENSTTRP00000004553/1-433 MDSVEKGAAT SVSNPRGRPS RGRPPKLQRN SRGGQGRGVE KPPHLAALIL ENSP00000229329/1-434 MDSVEKGAAT SVSNPRGRPS RGRPPKLQRN SRGGQGRGVE KPPHLAALIL bmy_06516T0/1-434 MDSVEKGAAT SVSNPRGRPS RGRPPKLQRN SRGGQGRGVE KPPHLAALIL BACU016344/1-379 MDSEEKGAAT SVSNPRGRPS RGRPPKLQRN SRGGQGRGVE KPPHLAALIL 51 100 ENSBTAP00000013373/1-436 ARGGSKGIPL KNIKHLAGVP LIGWVLRAAL DSGVFQSIWV STDHDEIENV ENSTTRP00000004553/1-433 ARGGSKGIPL KNIKHLAGVP LIGWVLRAAL DSGVFQSVWV STDHDEIENV ENSP00000229329/1-434 ARGGSKGIPL KNIKHLAGVP LIGWVLRAAL DSGAFQSVWV STDHDEIENV bmy_06516T0/1-434 ARGGSKGIPL KNIKHLAGVP LIGWVLRAAL DSGVFQSVWV STDHDEIENV BACU016344/1-379 ARGGSKGIPL KNIKHLAGVP LIGWVLRAAL DSGVFQSVWV STDHDEIENV 101 150 ENSBTAP00000013373/1-436 AKQFGAQVHR RSSEASKDSS TSLDAIIEFL NYHNEVDIVG NIQATSPCLH ENSTTRP00000004553/1-433 AKQFGAQVHR RSSEASKDSS TSLDAIIEFL NYHNEVDIVG NIQATSPCLH ENSP00000229329/1-434 AKQFGAQVHR RSSEVSKDSS TSLDAIIEFL NYHNEVDIVG NIQATSPCLH bmy_06516T0/1-434 AKQFGAQVHR RSSEASKDSS TSLDAIIEFL NYHNEVDIVG NIQATSPCLH BACU016344/1-379 AKQFGAQVHR RSSEASKDSS TSLDAIIEFL NYHNEVDIVG NIQATSPCLH 151 200 ENSBTAP00000013373/1-436 PTDLQKVAEM IREEGYDSVF SVVRRHQFRW GEIQKGVREM TEPLNLNPAK ENSTTRP00000004553/1-433 PTDLQKVAEM IREEGYDS-F SVVXXXXXXX XXXXXXXREM TEPLNLNPAK ENSP00000229329/1-434 PTDLQKVAEM IREEGYDSVF SVVRRHQFRW SEIQKGVREV TEPLNLNPAK bmy_06516T0/1-434 PTDLQKVAEM IREEGYDSVF SVVRRHQFRW GEIQKGVREM TEPLNLNPAK BACU016344/1-379 PTDLQKVAEM IREEGYDSVF SVVRRHQFRW GEIQKGVREM TEPLNLNPAK 201 250 ENSBTAP00000013373/1-436 RPRRQDWDGE LYENGSFYFA KRHLIEMGYL QFIKMKYYIV KFEHSV-IDL ENSTTRP00000004553/1-433 RPRRQDWDGE LYENGSFYFA KRHLIEMGYL QGGKMAYYEM RAEHSVDIDV ENSP00000229329/1-434 RPRRQDWDGE LYENGSFYFA KRHLIEMGYL QGGKMAYYEM RAEHSVDIDV bmy_06516T0/1-434 RPRRQDWDGE LYENGSFYFA KRHLIEMGYL QGGKMAYYEM RAEHSVDIDV BACU016344/1-379 RPRRQDWDGE LYENGSFYFA KRHLIEMGYL QGGKMAYYEM RAEHSVDIDV 251 300 ENSBTAP00000013373/1-436 DLAIIYWCLP DERDFRYGYF GKEKLKEIKL FVCNIDGCLT NGHIYVSGDQ ENSTTRP00000004553/1-433 DID---WPIA EQRVLRFGYF GKEKLKEIKL FVCNIDGCLT NGHIYVSGDQ ENSP00000229329/1-434 DID---WPIA EQRVLRYGYF GKEKLKEIKL LVCNIDGCLT NGHIYVSGDQ bmy_06516T0/1-434 DID---WPIA EQRVLRFGYF GKEKLKEIKL FVCNIDGCLT NGHIYVSGDQ BACU016344/1-379 DID---WPIA EQRVLRFGYF GKEKLKEIKL FVCNIDGCLT NGHIYVSGDQ 301 350 ENSBTAP00000013373/1-436 KEIISYDVKD AIGISLLKKS GIEVRLISER ACSKQTLSSL KLDCKMEVNV ENSTTRP00000004553/1-433 KEIISYDVKD AIGISLLKKS GIEVRLISER ACSKQTLSSL KLDCKMEVSV ENSP00000229329/1-434 KEIISYDVKD AIGISLLKKS GIEVRLISER ACSKQTLSSL KLDCKMEVSV bmy_06516T0/1-434 KEIISYDVKD AIGISLLKKS GIEVRLISER ACSKQTLSSL KLDCKMEVSV BACU016344/1-379 KEIISYDVKD AIGISLLKKS GIEVRLISER ACSKQTLSSL KLDCKMEVSV 351 400 ENSBTAP00000013373/1-436 PDKLAVVDEW RKEMGLCWKE VAYLGNEVSD EECLKKVGLS GVPADACAAA ENSTTRP00000004553/1-433 PDKLAVVDEW RKEMGLCWKE VAYLGNEVSD EECLKKVGLS GVPADACAAA ENSP00000229329/1-434 SDKLAVVDEW RKEMGLCWKE VAYLGNEVSD EECLKRVGLS GAPADACSTA bmy_06516T0/1-434 PDKLAVVDEW RKEMGLCWKE VAYLGNEVSD EECLKKVGLG GVPADACAAA BACU016344/1-379 PDKLAVVDEW RKEMGLCWKE VAYLG----- ---------- ---------- 401 450 ENSBTAP00000013373/1-436 QKAVGYICKS SGGRGALREF AEHIFLLMEK VINSCQK ENSTTRP00000004553/1-433 QKAVGYICKS YGGRGALREF AEHVFLLMEK VINSCQK ENSP00000229329/1-434 QKAVGYICKC NGGRGAIREF AEHICLLMEK VNNSCQK bmy_06516T0/1-434 QKAVGYICKS NGGRGALREF AEHVFLLMEK VINSCQK BACU016344/1-379 ---------- ---------- ---------- WYPSIQP