KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:24 2014 Check: 00 .. Name: ENSP00000309649/1-305 Len: 348 Check: 5863 Weight: 1.00 Name: bmy_18289T0/1-205 Len: 348 Check: 1303 Weight: 1.00 Name: BACU004302/1-327 Len: 348 Check: 2723 Weight: 1.00 Name: ENSBTAP00000013397/1-310 Len: 348 Check: 9992 Weight: 1.00 Name: ENSTTRP00000001295/1-307 Len: 348 Check: 353 Weight: 1.00 // 1 50 ENSP00000309649/1-305 ---------- -MLGRNTWK- -TSAFSFLVE QMWAPLWSRS MRPGRWCSQR bmy_18289T0/1-205 ---------- ---------- ---------- ---------- ---------- BACU004302/1-327 MGAVIWPSIP LLVGNHHQGH WEAGEQSNEN RLWTT----- ---------- ENSBTAP00000013397/1-310 ------MVRP PVLGWSHLK- -SSGLSLLAK QIWGTLRSHL LRPARWCSQV ENSTTRP00000001295/1-307 ------MLRL LGSGRGHPK- -ASGLSVLVK QMCGTLRNHP LTLERWCSQG 51 100 ENSP00000309649/1-305 SCAWQTSNNT LHPLWTVPVS VPGGTRQSPI NIQWRDSVYD PQLKPLRVSY bmy_18289T0/1-205 ---------- ---------- ---------- ---------- ---------- BACU004302/1-327 -YSQKATGPT VHAFWKGPAS VPGGARQSPI NIRWKDSVYD PRLKPLRVSY ENSBTAP00000013397/1-310 PCAQRRRNDA LHPVWKGPAS VPGGTRQSPI NIRWRDSVYD PQLQPLGVSY ENSTTRP00000001295/1-307 ACVQTKRNDA LHAFWKGPAS VPRGARQSPI NIRWKDSVYD PRLKPL-VSY 101 150 ENSP00000309649/1-305 EAASCLYIWN TGYLFQVEFD DATEASGISG GPLENHYRLK QFHFHWGAVN bmy_18289T0/1-205 ---------- ---------- -------ISG GPLENHYRLK QFHFHWGAVN BACU004302/1-327 DSAACLYVWN TGYLFQVEFD DSAEGSGISG GPLENHYRLK QFHFHWGAVN ENSBTAP00000013397/1-310 NAEACLYVWN TGYLFQVEFD DSTEGSGISG GPLENHYRLK QFHFHWGAVN ENSTTRP00000001295/1-307 DSAACLYVWN TGYLFQVEFD DSTEGS-ISG GPLENHYRLK QFHFHWGAAN 151 200 ENSP00000309649/1-305 EGGSEHTVDG HAYPAELHLV HWNSVKYQNY KEAVVGENGL A-----VIGV bmy_18289T0/1-205 EWGSEHTVDD HVYPAEVR-- ---------- SSPCVGTSRV PGHIAEIKPS BACU004302/1-327 EWGSEHTVDD HVYPAELHLV HWNAVKYQNY TEAVMGEDGL A-----VVGV ENSBTAP00000013397/1-310 EWGSEHTVDD RVYPAELHLV HWNAVKYQNY TDAVTGADGL A-----VVGV ENSTTRP00000001295/1-307 EWGSEHTVDD HVYPAELHLV HWNAVKYQNY TEAVMGEDGL A-----VVGV 201 250 ENSP00000309649/1-305 FLKLGAHHQT LQRLVDILPE IKHKDARAAM RPFDPSTLLP TCWDYWTYAG bmy_18289T0/1-205 VVPPSPASST HLRACGLLP- ---QDARAAL GPFQPSCLLP ACQDYWTYPG BACU004302/1-327 FLKLGARHEA LQKLVAVLPD IKHKDARAAL GPFQPSCLLP ACQDYWTYPG ENSBTAP00000013397/1-310 FLKLGARHEE LQELVAVLPD IKHKDARAAL GPFQPSCLLP ACQDYWTYPG ENSTTRP00000001295/1-307 FLKLGARHEA LQELVAVLPD IKHKDARAAL GPFQPSCLLP ACRDYWTYPG 251 300 ENSP00000309649/1-305 SLTTPPLTES VTWIIQKEPV EVAPSQLSAF RTLLFSALGE EEKMMVNNYR bmy_18289T0/1-205 SLTTPPLSES VTWIIHKKPT EVAQDQLAAF RSLMFSALGE EEKTMVNNYR BACU004302/1-327 SLTTPPLSES VTWIIHKKPT EVAQDQLAAF RSLMFSALGE EEKTMVNNYR ENSBTAP00000013397/1-310 SLTTPPLSES VTWIIHKKPI EVAQDQLAAF RSLLFSVPGE EEKTMVNNYR ENSTTRP00000001295/1-307 SLTTPPLSES VTWIIHKKPT EVAQDQLAAF RSLMFTALGE EEKTMVNNYR 301 350 ENSP00000309649/1-305 PLQPLMNRKV WASFQ----- ---------- ---------- ATNEGTRS bmy_18289T0/1-205 PLQPLMKREV RSSFQPLKMV QDPKFTTSKL TGRTDFNKRK YCFPGFMF BACU004302/1-327 PLQPLMKREV RSSFQPLKMV QDPKFTTSKL TGRTDFNKRR CCFPGFVF ENSBTAP00000013397/1-310 PLQPLMNRKV RSSFQ----- ---------- ---------- ATHEGARL ENSTTRP00000001295/1-307 PLQPLLKREV RSSF------ ---------- ---------- ATEDGAGS