KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:50:25 2014  Check: 00 ..

 Name: ENSP00000356912/1-261     Len:    265  Check:  8563  Weight:  1.00
 Name: ENSBTAP00000013422/1-247  Len:    265  Check:  5520  Weight:  1.00
 Name: bmy_17076T0/1-246         Len:    265  Check:  2094  Weight:  1.00
 Name: ENSTTRP00000003328/1-264  Len:    265  Check:  2235  Weight:  1.00

//


                          1                                                   50
ENSP00000356912/1-261     MENFSLLSIS GPPISSSALS AFPDIMFSRA TSLPDIAKTA VPTEASSPAQ 
ENSBTAP00000013422/1-247  MENFSLLSIS GTRISSSALS TLPDIMSSRA TSLPDIAKPV LPTEVPSPVQ 
bmy_17076T0/1-246         MENFSLLSIS EPRISSSALS TFPDITSSRA TSLPGFAKTV FPTEASSPAQ 
ENSTTRP00000003328/1-264  MENFSLLSIS GPRISSSALS TFPDITPSRA TSLPGIAKTV SPTEASSPAQ 


                          51                                                 100
ENSP00000356912/1-261     ALPPQYQSII VRQGIQNTAL SPDCSLGDTQ HGEKLRRNCT IYRPWFSPYS 
ENSBTAP00000013422/1-247  ALPPQCPGGV LRHGVHNIVI SPDCILGDAP NGEQLRWNCT IYRPWFSPYS 
bmy_17076T0/1-246         ALLPQHQSSA LRHGVYNTVF SSDCILGDPP NREQLRWNCT IYRPWFSPYS 
ENSTTRP00000003328/1-264  ALPPQYQSGA LRHGVHNTVL SAGCISGDPP NREKLRRNCT IYRPWFSPYS 


                          101                                                150
ENSP00000356912/1-261     YFVCADKESQ LEAYDFPEVQ QDEGKWDNCL SEDMAENICS SSSSPENTCP 
ENSBTAP00000013422/1-247  YFLCKDKESH LETYSFSEVQ RDEGQRDSCL PEDTADSVCS SSPSPENTCP 
bmy_17076T0/1-246         YFVCKDKESH LETYSFPEVQ RDEGRGDNCL PEDTAESICS SSSSPENTCP 
ENSTTRP00000003328/1-264  YFVCKDRESH LETYSFPEVQ RDEGRGDSCL PEDTAESICS SSSSPENTCP 


                          151                                                200
ENSP00000356912/1-261     REATKKSRHG LDS---ITSQ DILMASRWHP AQQNGYKCVA CCRMYPTLDF 
ENSBTAP00000013422/1-247  REATKKSRPG PDTTDSITFQ DILMASKWHP AQQNGYKCAS CCRLYPTLHS 
bmy_17076T0/1-246         QEATKKSRHG LDSTDYITSQ DILMASKWYP AQQKGYKCAA CCRMYPTLHS 
ENSTTRP00000003328/1-264  QEATKKSRHG LDSTDYITSQ DILMASKWYP AQQNGYKCAA CCRMYPTLHS 


                          201                                                250
ENSP00000356912/1-261     LKSHIKRGFR EGFSCKVYYR KLKALWSKEQ KARLGDRLSS GSCQAFNSPA 
ENSBTAP00000013422/1-247  LKSHIKRGFK EGFSCKVYYH KLKTLWYKEQ KARPGDRLSL GSGQAFR--- 
bmy_17076T0/1-246         LKSHIKGGFK EGFSCKVYYR KLKTFWGKEQ KVRPGDRLSS GSCQAF---- 
ENSTTRP00000003328/1-264  LKSHIKGGYK EGFSCKVYYR KLKTLWGKEQ KGRPGDRLSS GSCQAFNRPA 


                          251                                                300
ENSP00000356912/1-261     EHLRQIGGEA YLCL- 
ENSBTAP00000013422/1-247  ---------- ----- 
bmy_17076T0/1-246         ---------- ----- 
ENSTTRP00000003328/1-264  ERFRT-GDDA YLCLY