KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:50:28 2014  Check: 00 ..

 Name: ENSP00000264954/1-217     Len:    228  Check:  1376  Weight:  1.00
 Name: ENSBTAP00000013431/1-217  Len:    228  Check:  1625  Weight:  1.00
 Name: bmy_16999T0/1-228         Len:    228  Check:  3652  Weight:  1.00
 Name: ENSTTRP00000014227/1-217  Len:    228  Check:  1032  Weight:  1.00
 Name: BACU020272/1-197          Len:    228  Check:  9775  Weight:  1.00

//


                          1                                                   50
ENSP00000264954/1-217     ---------- -MAAQCVRLA RRSLPALALS LRPSPRLLCT ATKQKNSGQN 
ENSBTAP00000013431/1-217  ---------- -MAARCVRLA RGSLPAFALS LRSSPRLLCT AAKQKNNGQN 
bmy_16999T0/1-228         MPRAGAVPAA VMAARCVRVV RHNLPALALS LRSSPRLLCT ATKQENNGQN 
ENSTTRP00000014227/1-217  ---------- -MATRCVRVA RHRLPALALS PRSSPRLLCT ATKQKNNGQN 
BACU020272/1-197          ---------- ---------- ---------- -RSSPRLLCT ATKQKNNGQN 


                          51                                                 100
ENSP00000264954/1-217     LEEDMGQSEQ KADPPATEKT LLEEKVKLEE QLKETVEKYK RALADTENLR 
ENSBTAP00000013431/1-217  LEEDAGQNEQ KTDLPSTEKT LMEEKVKLEE QLKETMEKYK RALADTENLR 
bmy_16999T0/1-228         LEEDVGQDEQ KTDLPSAEKT LLEEKAKLEE QLKETTEKYK RALADTENLR 
ENSTTRP00000014227/1-217  LEEDMGQNEQ KTDLPSAEKT LMEEKVKLEE QLKETMEKYK RALADTENLR 
BACU020272/1-197          LEEDVGQNEQ KTDLPSAEKT LMEEKAKLEE QLKETMEKYK RALADSENLR 


                          101                                                150
ENSP00000264954/1-217     QRSQKLVEEA KLYGIQAFCK DLLEVADVLE KATQCVPKEE IKDDNPHLKN 
ENSBTAP00000013431/1-217  QRSQKLVEEA KLYGIQGFCK DLLEVADILE KATQCVPQEE IRDDNPHLKS 
bmy_16999T0/1-228         QRSQKLVEEA KLYGIQGFCK DLLEVADVLE KATQCVPKEE IRDDNPHLKN 
ENSTTRP00000014227/1-217  QRSQKLVEEA KLYGIQGFCK DLLEVADILE KATQCVPKEE IRDDNPHLKN 
BACU020272/1-197          QRSQKLVEEA KLYGIQGFCK DLLEVADILE KATQCVPKEE IRDDNPHLKN 


                          151                                                200
ENSP00000264954/1-217     LYEGLVMTEV QIQKVFTKHG LLKLNPVGAK FDPYEHEALF HTPVEGKEPG 
ENSBTAP00000013431/1-217  LYEGLVMTEV QIQKVFTKHG LLRLNPLGAK FDPYEHEALF HTPVEGKEPG 
bmy_16999T0/1-228         LYEGLVMTEV QIQKVFRKHG LLRLNPVGAK FDPYEHEALF HTPVEGKEPG 
ENSTTRP00000014227/1-217  LYEGLVMTEV QIQKVFRKHG LLRLNPAGAK FDPYEHEALF HTPVEGKEPG 
BACU020272/1-197          LYEGLVMTEV QIQKVFRKHG LLRLNPVGAK FDPYEHEALF HTPVEGKEPG 


                          201                                                250
ENSP00000264954/1-217     TVALVSKVGY KLHGRTLRPA LVGVVKEA 
ENSBTAP00000013431/1-217  TVALVNKVGY KLHGRTLRPA LVGVVKGA 
bmy_16999T0/1-228         MVALVNKVGY KLHGRTLRPA LVGVVKAA 
ENSTTRP00000014227/1-217  TVALVTKVGY KLHGRTLRPA LVGVVKAA 
BACU020272/1-197          MVALVNKVGY KLHGRTLRPA LVGVVKEA