KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:30 2014 Check: 00 .. Name: ENSTTRP00000011131/1-355 Len: 366 Check: 8865 Weight: 1.00 Name: ENSP00000253801/1-357 Len: 366 Check: 5386 Weight: 1.00 Name: ENSBTAP00000013436/1-357 Len: 366 Check: 3369 Weight: 1.00 Name: bmy_21165T0/1-346 Len: 366 Check: 4179 Weight: 1.00 Name: BACU007106/1-366 Len: 366 Check: 905 Weight: 1.00 // 1 50 ENSTTRP00000011131/1-355 MEEGMNALHD FGVQSTHYLQ VNYQNSQDWF ILVSVIADLR N--------- ENSP00000253801/1-357 MEEGMNVLHD FGIQSTHYLQ VNYQDSQDWF ILVSVIADLR N--------- ENSBTAP00000013436/1-357 MEKGMNVLHD FGIQSTHYLQ VNYQNSQDWF ILVSVIADLR N--------- bmy_21165T0/1-346 MEEGMNALHD FGIQSTRYLQ VNYQNSQDWF ILVSVIADLR N--------- BACU007106/1-366 MEEGMNALHD FGIQSTRYLQ VNYQNSQDWF ILVSVIADLR NXXXXXXXXX 51 100 ENSTTRP00000011131/1-355 AFYVLFPIWF HLREAVGIKL LWVAVIGDWL NLVFKWILFG QRPYWWVLDT ENSP00000253801/1-357 AFYVLFPIWF HLQEAVGIKL LWVAVIGDWL NLVFKWILFG QRPYWWVLDT ENSBTAP00000013436/1-357 AFYVLFPIWF HLREAVGIKL LWVAVIGDWL NLVFKWILFG QRPYWWVLDT bmy_21165T0/1-346 AFYVLFPIWF HLREAVGIKL LWVAVIGDWL NLVFKWILFG QRPYWWVLDT BACU007106/1-366 AFYVLFPIWF HLREAVGIKL LWVAVIGDWL NLVFKWILFG QRPYWWVLDT 101 150 ENSTTRP00000011131/1-355 DYYSNTSXXX XXXXXXXXXX XXXSPSGHAM GTAGVYYVMV TSTLSIFRGK ENSP00000253801/1-357 DYYSNTSVPL IKQFPVTCET GPGSPSGHAM GTAGVYYVMV TSTLSIFQGK ENSBTAP00000013436/1-357 DYYSNTSAPL IKQFPVTCET GPGSPSGHAM GTAGVYYVMV TSTLSIFRGK bmy_21165T0/1-346 DYYSNTSVPL IKQFPVTCET GP-------- ---GVYYVMV TSTLSIFRGK BACU007106/1-366 DYYSNTSVPL IKQFPVTCET GPGSPSGHAM GTAGVYYVMV TSTLSIFRGK 151 200 ENSTTRP00000011131/1-355 KKPTYRFRCL NIILW-GFWA VQL-VCLSRI YLAAHFPHQV VAGVLSGIAV ENSP00000253801/1-357 IKPTYRFRCL NVILWLGFWA VQLNVCLSRI YLAAHFPHQV VAGVLSGIAV ENSBTAP00000013436/1-357 KKPTYRFRCL NVMLWLGFWV VQLNVCLSRI YLAAHFPHQV VAGVLSGIAV bmy_21165T0/1-346 KKPTYGFRCL NIILWLGFWA VQLNVCLSRI YLAAHFPHQV VAGVLSGIAV BACU007106/1-366 KKPTYGFRCL NIILWLGFWA VQLNVCLSRI YLAAHFPHQV VAGVLSGIAV 201 250 ENSTTRP00000011131/1-355 AETFRHIRSI YNANLKKYFL ITFFLFSFAI GFYLLLKGLG VDLLWTVEKA ENSP00000253801/1-357 AETFSHIHSI YNASLKKYFL ITFFLFSFAI GFYLLLKGLG VDLLWTLEKA ENSBTAP00000013436/1-357 AETFRHIQSI YNASLKKYFL ITCFLFSFAI GFYLLLKWLG VDLLWTLEKA bmy_21165T0/1-346 AETFRHIRSI YNASLKKYFL ITFFLFSFAI GFYLLLKGLG VDLLWTLEKA BACU007106/1-366 AETFRHIRSI YNASLKKYFL ITFFLFSFAI GFYLLLKGLG VDLLWTLEKA 251 300 ENSTTRP00000011131/1-355 KRRCERPEWV HIDTTPFASL LKNLGTLFGL GLALNSRMYR ESCKGKLSKW ENSP00000253801/1-357 QRWCEQPEWV HIDTTPFASL LKNLGTLFGL GLALNSSMYR ESCKGKLSKW ENSBTAP00000013436/1-357 KRRCERPEWV HIDTTPFASL LKNLGTLFGL GLALNSSMYR ESCKGKLSKW bmy_21165T0/1-346 KRRCERPEWV HIDTTPFASL LKNLGTLFGL GLALNSSMYR ESCKGKLSKW BACU007106/1-366 KRRCERPEWV HIDTTPFASL LKNLGTLFGL GLALNSSMYR ESCKGKLSKW 301 350 ENSTTRP00000011131/1-355 FPFRLSCIVA SLVLLHLFDS LKPPSHIELI FYVLSFCKSA AVPLASVSLI ENSP00000253801/1-357 LPFRLSSIVA SLVLLHVFDS LKPPSQVELV FYVLSFCKSA VVPLASVSVI ENSBTAP00000013436/1-357 FPFRLSCIVA SLVLLHLFDS LKPPSQIELI FYVLSFCKSA AVPLASVSLI bmy_21165T0/1-346 FPFRLSCIVA SLVLLHLFDS LKPPSQIELI FYVLSFCKSA AVPLASVSLI BACU007106/1-366 FPFRLSCIVV SLVLLHLFDS LKPPSQIELI FYVLSFCKSA AVPLASVSLI 351 400 ENSTTRP00000011131/1-355 PYCLAQVLGQ PNKKTL ENSP00000253801/1-357 PYCLAQVLGQ PHKKSL ENSBTAP00000013436/1-357 PYCLAWVLGQ PNKKTV bmy_21165T0/1-346 PYCLAQVLGQ PNKKTL BACU007106/1-366 PYCLAQVLGQ PNKKTL