KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:31 2014 Check: 00 .. Name: ENSBTAP00000013448/1-544 Len: 556 Check: 8544 Weight: 1.00 Name: BACU012507/1-498 Len: 556 Check: 4769 Weight: 1.00 Name: bmy_21819T0/1-489 Len: 556 Check: 6274 Weight: 1.00 Name: ENSTTRP00000008345/1-550 Len: 556 Check: 4741 Weight: 1.00 Name: ENSP00000278568/1-553 Len: 556 Check: 3353 Weight: 1.00 // 1 50 ENSBTAP00000013448/1-544 MSNNGLDIQD KPPAPPMRNT STMIGAGSKD AGTLNHGSKP LPPNPEEKKK BACU012507/1-498 MSNNGLDIQD KPPAPPMRNT STMIGAGSKD AGTLNHGSKP LPPNPEEKKK bmy_21819T0/1-489 MSNNGLDIQD KPPAPPMRNT STMIGAGSKD AGTLNHGSKP LPPNPEEKKK ENSTTRP00000008345/1-550 MSNNGLDIQD KPPAPPMRNT STMIGAGSKD AGTLNHGSKP LPPNPEEKKK ENSP00000278568/1-553 MSNNGLDIQD KPPAPPMRNT STMIGAGSKD AGTLNHGSKP LPPNPEEKKK 51 100 ENSBTAP00000013448/1-544 KDRFYRAILP GDKTNKKKEK ERPEISLPSD FEHTIHVGFD AVTGEFTGMP BACU012507/1-498 KDRFYRAILP GDKTNKKKEK ERPEISLPSD FEHTIHVGFD AVTGEFTGMP bmy_21819T0/1-489 KDRFYRAILP GDKS------ ---------- ---------- ------TGMP ENSTTRP00000008345/1-550 KDRFYRAILP GDKTNKKKEK ERPEISLPSD FEHTIHVGFD AVTGEFTGMP ENSP00000278568/1-553 KDRFYRSILP GDKTNKKKEK ERPEISLPSD FEHTIHVGFD AVTGEFTGMP 101 150 ENSBTAP00000013448/1-544 EQWARLLQTS NITKSEQKKN PQAVLDVLEF YNSKKTSNSQ KYMSFTDKSA BACU012507/1-498 EQWARLLQTS NITKSEQKKN PQAVLDVLEF YNSKKTSNSQ KYMSFTDKSA bmy_21819T0/1-489 EQWARLLQTS NITKSEQKKN PQAVLDVLEF YNSKKTSNSQ KYMSFTDKSA ENSTTRP00000008345/1-550 EQWARLLQTS NITKSEQKKN PQAVLDVLEF YNSKKTSNSQ KYMSFTDKSA ENSP00000278568/1-553 EQWARLLQTS NITKSEQKKN PQAVLDVLEF YNSKKTSNSQ KYMSFTDKSA 151 200 ENSBTAP00000013448/1-544 EDYNSSNTLN VKAVSETPAV PPVSEDE-DD DDDGTPPPVI APRPEHTKSV BACU012507/1-498 EDYNSSNTLN VKTVSETPAV LPVSEDE-DD DDDATPPPVI APRPEHTKSV bmy_21819T0/1-489 EDYNSSNTLN VKTVSETPAV LPVSEDE-DD DDDATPPPVI APRPEHTKSV ENSTTRP00000008345/1-550 EDYNSSNTLN VKTVSETPAV LPVSEDE-DD DDDATPPPVI APRPEHTKSV ENSP00000278568/1-553 EDYNSSNALN VKAVSETPAV PPVSEDEDDD DDDATPPPVI APRPEHTKSV 201 250 ENSBTAP00000013448/1-544 YTRSVIEPLP ITPTRDVATS PISPTENNTT PPDALTRNTE KQKKKPKMSD BACU012507/1-498 YTRSVIEPLP ITPTRDVATS PISPTENNAT PPDALTRNTE KPKKKPKMSD bmy_21819T0/1-489 YTRSVIEPLP ITPTRDVATS PISPTENNTT PPDALTRNTE KQKKKPKMSD ENSTTRP00000008345/1-550 YTRSVIEPLP ITPTRDVATS PISPTENNTT PPDALTRNTD KQKKTP-MSD ENSP00000278568/1-553 YTRSVIEPLP VTPTRDVATS PISPTENNTT PPDALTRNTE KQKKKPKMSD 251 300 ENSBTAP00000013448/1-544 EEILEKLRSI VSVGDPKKKY TRFEKIGQGA SGTVYTAMDV ATGQEVAIKQ BACU012507/1-498 EEILEKLRSI VSVGDPKKKY TRFEKIGQGA SGTVYTAMDV ATGQEVAIKQ bmy_21819T0/1-489 EEILEKLRSI VSVGDPKKKY TRFEKIGQGA SGTVYTAMDV ATGQ------ ENSTTRP00000008345/1-550 EEILERLRSI VSVGDPKKKY TRFEKIGQGA SGTVYTAMDV ATGQEVAIKQ ENSP00000278568/1-553 EEILEKLRSI VSVGDPKKKY TRFEKIGQGA SGTVYTAMDV ATGQEVAIKQ 301 350 ENSBTAP00000013448/1-544 MNLQQQPKKE LIINEILVMR ENKNPNIVNY LDSYLVGDEL WVVMEYLAGG BACU012507/1-498 MNLQQQPKKE LIINEILVMR ENKNPNIVNY LDSYLVGDEL WVVMEYLAGG bmy_21819T0/1-489 ---------- ----EILVMR ENKNPNIVNY LDSYLVGDEL WVVMEYLAGG ENSTTRP00000008345/1-550 MNLQQQPKKE LIINEILVMR ENKNPNIVNY LDSYLVGDGL -VVMEYLAGG ENSP00000278568/1-553 MNLQQQPKKE LIINEILVMR ENKNPNIVNY LDSYLVGDEL WVVMEYLAGG 351 400 ENSBTAP00000013448/1-544 SLTDVVTETC MDEGQIAAVC RECLQALEFL HSNQVIHRDI KSDNILLGMD BACU012507/1-498 SLTDVVTETC MDEGQIAAVC RECLQALEFL HSSQVIHRDI KSDNILLGMD bmy_21819T0/1-489 SLTDVVTETC MDEGQIAAVC RE---ALEFL HSSQVIHRDI KSDNILLGMD ENSTTRP00000008345/1-550 SLTGIL-GTH MDEGQIGAVR HECLQALEFL HSSQVIHRDI KSDNILLGMD ENSP00000278568/1-553 SLTDVVTETC MDEGQIAAVC RECLQALEFL HSNQVIHRDI KSDNILLGMD 401 450 ENSBTAP00000013448/1-544 GSVKLTDFGF CAQITPEQSK RSTMVGTPYW MAPEVVTRKA YGPKVDIWSL BACU012507/1-498 GSVKLTDFGF CAQITPEQSK RSTMGGTPYW MAPEVVTRKA YGPKVDIWSL bmy_21819T0/1-489 GSVKLTDFGF CAQITPEQSK RSTMVGTPYW MAPEVVTRKA YGPKVDIWSL ENSTTRP00000008345/1-550 GSVKLTDFGF CAQITPEQSK RSTMVGTPYW MAPEVVTRKA YGPKVDIWSL ENSP00000278568/1-553 GSVKLTDFGF CAQITPEQSK RSTMVGTPYW MAPEVVTRKA YGPKVDIWSL 451 500 ENSBTAP00000013448/1-544 GIMAIEMIEG EPPYLNENPL RALYLIATNG TPELQNPEKL SAIFRDFLNR BACU012507/1-498 GIMAIEMIEG EPPYLNENPL R--------- ---------- ---------- bmy_21819T0/1-489 GIMAIEMIEG EPPYLNENPL RALYLIATNG TPELQNPEKL SAIFRDFLNR ENSTTRP00000008345/1-550 GIMAIEMIEG EPPYLNENPL RALYLIATNG TPELQNPEKL SAIFRDFLNR ENSP00000278568/1-553 GIMAIEMIEG EPPYLNENPL RALYLIATNG TPELQNPEKL SAIFRDFLNR 501 550 ENSBTAP00000013448/1-544 CLEMDVEKRG SAKELLQHQF LKI------- ----AKPLSS LTPLIAAAKE BACU012507/1-498 ---------- -------HQF LKI------- ----AKPLSS LTPLIAAAKE bmy_21819T0/1-489 CLEMDVEKRG SAKELLQHQF LKI------- ----AKPLSS LTPLIAAAKE ENSTTRP00000008345/1-550 CLEMDVEKRG SAKELLQVRQ LRFQVFSNFC MIAASVPEDC QAPLQPHSTD ENSP00000278568/1-553 CLEMDVEKRG SAKELLQVRK LRFQVFSNFS MIAASIPEDC QAPLQPHSTD 551 600 ENSBTAP00000013448/1-544 ATKNNH BACU012507/1-498 ATKNNH bmy_21819T0/1-489 ATKNNH ENSTTRP00000008345/1-550 RCRK-- ENSP00000278568/1-553 CCS---