KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:32 2014 Check: 00 .. Name: ENSP00000342840/1-297 Len: 298 Check: 7689 Weight: 1.00 Name: ENSBTAP00000013450/1-171 Len: 298 Check: 137 Weight: 1.00 Name: ENSTTRP00000015013/1-297 Len: 298 Check: 9956 Weight: 1.00 Name: bmy_18784T0/1-297 Len: 298 Check: 5531 Weight: 1.00 Name: BACU014446/1-72 Len: 298 Check: 8804 Weight: 1.00 // 1 50 ENSP00000342840/1-297 MAVGTRGTLL KKSLTVWFCG PGARSATRAV STSLPRREQV TWCCCSGSWP ENSBTAP00000013450/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015013/1-297 MVLGTPGTPL RKSPTK-LCG PGARSARRRV PTTLTSQEQG TWCCCSGSWP bmy_18784T0/1-297 MRQKEVLTKT FQGPAV-VCR TPTSHIYMFE NGVGDSGDSS EEESHQEALR BACU014446/1-72 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000342840/1-297 RRTASTSWRC SMAANTFYFR PNGAGDTRQN LIPDFYAFRV INNGKVADIK ENSBTAP00000013450/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015013/1-297 RRTASTSSLF SMAAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXVADIK bmy_18784T0/1-297 PRGKERQKKG AHHPHQPGAG DMVLLQRELA QEDSLNKLAL QYGCKVADIK BACU014446/1-72 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000342840/1-297 KVNNFIREQD LYALKSVKIP VRNHGILMET HKELKPLLSP SSETTVTV-E ENSBTAP00000013450/1-171 ---------- ---------- -------TET HKELRPLLNS SSETRVTFEE ENSTTRP00000015013/1-297 KVNNFIREQD LYALKSVKIP VKNHGILTET HKELRPLLSS STETRVTFEE bmy_18784T0/1-297 KVNNFIREQD LHALKSVKIP VKNHGILTET HKELRPLLSS STETRVTCEE BACU014446/1-72 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000342840/1-297 LPEADRAGAG TGAQAGQLMG FFKGIDQDIE RAVQSEIFLH ESYCMDTSHQ ENSBTAP00000013450/1-171 QPDPHRAAVN ASASSSSLTD FFKGIDQNIE HAVQSEIFLS ESYSIETSSQ ENSTTRP00000015013/1-297 QPDPDRAAVS AGASSNTLTD FFKGIDQNIE HAVQSEIFLS ESCCIETSSQ bmy_18784T0/1-297 QPDPDRAAVS AGASSNPLTD FFKGIDQNIE HAVQSEIFLS ESYCIETSSQ BACU014446/1-72 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000342840/1-297 PLLPAPPKTP MDGADCGIQW WNAVFIMLLI GIVLPVFYLV YFKIQASGET ENSBTAP00000013450/1-171 PLLPAPPKIP TNGADCGIQW WNAVFIMLLI GVVLPVFYLV YFKIQATSET ENSTTRP00000015013/1-297 PLLPTPPKIP TNGADCGIQR WNAVFIMLLI GIVLPVFYLV YFKIQTTSEI bmy_18784T0/1-297 PLLPTLPKIP TNGADCGIQR WNAVFIMLLI GIVLPVFYLV YFKIQTTSEI BACU014446/1-72 ---------- ---------- ------MLLI GIVLPVFYLV YFKIQTTSEI 251 300 ENSP00000342840/1-297 PNSLNTTVIP NGSMAMGTVP GQAPRLAVAV PAVTSADSQF SQTTQAGS ENSBTAP00000013450/1-171 PSILNTTAIP NGSMAGNAVP GQAPRLAIPM PTIPSSDSQF SQTTHGGN ENSTTRP00000015013/1-297 PSSLNTTAVP NGSMAVSAVL GQSPKLAIPL PTIPSSDSQF SQTTHGKN bmy_18784T0/1-297 PSILNTTAVP NGSMAVSAVL GQSPKLAIPL PTIPSSDSQF SQTTHGEN BACU014446/1-72 PSILNTTAVP NGSMAVSAVL GQSPKLAIPL PTIPSSDSQF SQTTHGEN