KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:34 2014 Check: 00 .. Name: bmy_08607T0/1-645 Len: 769 Check: 711 Weight: 1.00 Name: ENSP00000291900/1-766 Len: 769 Check: 1514 Weight: 1.00 Name: ENSBTAP00000013468/1-769 Len: 769 Check: 3826 Weight: 1.00 Name: BACU016241/1-750 Len: 769 Check: 6289 Weight: 1.00 Name: ENSTTRP00000011010/1-766 Len: 769 Check: 9376 Weight: 1.00 // 1 50 bmy_08607T0/1-645 ---MASDTPE SLMALCTDFC LRNLDGTLGY LLDKETLRLH PDIFLPSEIC ENSP00000291900/1-766 ---MASDTPE SLMALCTDFC LRNLDGTLGY LLDKETLRLH PDIFLPSEIC ENSBTAP00000013468/1-769 APSMASDTPE SLMALCTDFC LRNLDGTLGC LLDKETLRLH PDIFLPSEIC BACU016241/1-750 ---MASDTPE SLMALCTDFC LRNLDGTLGY LLDKETLRLH PDIFLPSEIC ENSTTRP00000011010/1-766 ---MASDTPE SLMALCTDFC LRNLDGTLGY LLDKETLRLH PDIFLPSEIC 51 100 bmy_08607T0/1-645 DRLVNEYVEL VNAACNFEPH ESFFSLFSDP RSTRLTRIHL REDLVQDQDL ENSP00000291900/1-766 DRLVNEYVEL VNAACNFEPH ESFFSLFSDP RSTRLTRIHL REDLVQDQDL ENSBTAP00000013468/1-769 DRLVNEYVEL VNAACNFEPH ESFFSLFSDP RSTRLTRIHL REDLVQDQDL BACU016241/1-750 DRLVNEYVEL VNAACNFEPH ESFFSLFSDP RSTRLTRIHL REDLVQDQDL ENSTTRP00000011010/1-766 DRLVNEYVEL VNAACNFEPH ESFFSLFSDP RSTRLTRIHL REDLVQDQDL 101 150 bmy_08607T0/1-645 EAIRKQDLVE LYLTNCEKLS AKSLQTLRSF SHTLVSLSLF GCANIFYEEE ENSP00000291900/1-766 EAIRKQDLVE LYLTNCEKLS AKSLQTLRSF SHTLVSLSLF GCTNIFYEEE ENSBTAP00000013468/1-769 EAIRKQDLVE LYLTNCEKLS AKSLQTLRSF SHTLVSLSLF GCANIFYEEE BACU016241/1-750 EAIRKQDLVE LYLTNCEKLS AKSLQTLRSF SHTLVSLSLF GCANIFYEEE ENSTTRP00000011010/1-766 EAIRKQDLVE LYLTNCEKLS AKSLQTLRSF SHTLVSLSLF GCANIFYEEE 151 200 bmy_08607T0/1-645 NPGGCEDECL VNPTCQVLVK DFTFEGFSRL RFLNLGRMID GVPVESLLRP ENSP00000291900/1-766 NPGGCEDEYL VNPTCQVLVK DFTFEGFSRL RFLNLGRMID WVPVESLLRP ENSBTAP00000013468/1-769 NPGGCEDECL VNPTCQVLVK DFTFEGFSRL RFLNLGRMID GVPVESLLRP BACU016241/1-750 NPGGCEDECL VNPTCQVLVK DFTFEGFSRL RFLNLGRMID GVPVESLLRP ENSTTRP00000011010/1-766 NPGGCEDECL VNPTCQVLVK DFTFEGFSRL RFLNLGRMID GVPVESLLRP 201 250 bmy_08607T0/1-645 LNSLAALDLS GIQTSDAAFL TQWKDSLVSL VLYNMDLSDD HIRVIVQLHK ENSP00000291900/1-766 LNSLAALDLS GIQTSDAAFL TQWKDSLVSL VLYNMDLSDD HIRVIVQLHK ENSBTAP00000013468/1-769 LNSLAALDLS GIQTSDAAFL TQWKDSLVSL VLYNMDLSDD HIRVIVQLHK BACU016241/1-750 LNSLAALDLS GIQTSDAAFL TQWKDSLVSL VLYNMDLSDD HIRVIVQLHK ENSTTRP00000011010/1-766 LNSLAALDLS GIQTSDAAFL TQWKDSLVSL VLYNMDLSDD HIRVIVQLHK 251 300 bmy_08607T0/1-645 LR-------- ---------- ---------- ---------- ---------- ENSP00000291900/1-766 LRHLDISRDR LSSYYKFKLT REVLSLFVQK LGNLMSLDIS GHMILENCSI ENSBTAP00000013468/1-769 LRHLDISRDR LSSYYKFKLT RKVLSLFVQK LGNLMSLDIS GHMILENCSI BACU016241/1-750 LRHLDISRDR LSSYYKFKLT RKVLSLFVQK LGNLMSLDIS GHMILENCSI ENSTTRP00000011010/1-766 LRHLDISRDR LSSYYKFKLT RKVLSLFVQK LGNLMSLDIS GHMILENCSI 301 350 bmy_08607T0/1-645 ---------- -IEPSKSSIM PFRALKRPLQ FLGLFETSLC RLTHIPAYKV ENSP00000291900/1-766 SKMEEEAGQT SIEPSKSSII PFRALKRPLQ FLGLFENSLC RLTHIPAYKV ENSBTAP00000013468/1-769 SKMDEEAGQT SIEPSKSSIM PFRALKRPLQ FLGLFETSLC RLTHIPAYKV BACU016241/1-750 SKMDEDAGQT SIEPSKSSIM PFRALKRPLQ FLGLFETSLC RLTHIPAYKV ENSTTRP00000011010/1-766 SKMDEDAGQT SIEPSKSSIM PFRALKRPLQ FLGLFETSLC RLTHIPAYKV 351 400 bmy_08607T0/1-645 SGDKNEEQVL NAIEAYTEHR PEITSRAINL LFDIARIERC NQLLRALKLV ENSP00000291900/1-766 SGDKNEEQVL NAIEAYTEHR PEITSRAINL LFDIARIERC NQLLRALKLV ENSBTAP00000013468/1-769 SGDKNEEQVL NAIEAYTEHR PEITSRAINL LFDIARIERC NQLLRALKLV BACU016241/1-750 SGDKNEEQVL NAIEAYTEHR PEITSRAINL LFDIARIERC NQLLRALKLV ENSTTRP00000011010/1-766 SGDKNEEQVL NAIEAYTEHR PEITSRAIKL LFDIARIERC NQLLRALKLV 401 450 bmy_08607T0/1-645 ITALKCHKYD KNIQVTGSAA LFYLTNSEYR SEQSIKLRRQ VIQVVLNGME ENSP00000291900/1-766 ITALKCHKYD RNIQVTGSAA LFYLTNSEYR SEQSVKLRRQ VIQVVLNGME ENSBTAP00000013468/1-769 ITALKCHKYD KNIQVTGSAA LFYLTNSEYR SEQSVRLRRQ VIQVVLNGME BACU016241/1-750 ITALKCHKYD KNIQVTGSAA LFYLTNSEYR SEQSIKLRRQ VIQVVLNGME ENSTTRP00000011010/1-766 ITALKCHKYD KNIQVTGSAA LFYLTNSEYR SEQSIKLRRQ VIQVVLNGME 451 500 bmy_08607T0/1-645 SYQEVTVQRN CCLTLCNFSI PEELEFQYRR VNELLLSILN PTRQDESIQR ENSP00000291900/1-766 SYQEVTVQRN CCLTLCNFSI PEELEFQYRR VNELLLSILN PTRQDESIQR ENSBTAP00000013468/1-769 SYQEVTVQRN CCLTLCNFSI PEELEFQYRR VNELLLSILN PTRQDESIQR BACU016241/1-750 SYQEVTVQRN CCLTLCNFSI PEELEFQYRR VNELLLSILN PTRQDESIQR ENSTTRP00000011010/1-766 SYQEVTVQRN CCLTLCNFSI PEELEFQYRR VNELLLSILN PTRQDESIQR 501 550 bmy_08607T0/1-645 IAVHLCNALV CQVDNDHKEA VGKMGFVVTM LKLIQKKLLD KICDQVMEFS ENSP00000291900/1-766 IAVHLCNALV CQVDNDHKEA VGKMGFVVTM LKLIQKKLLD KTCDQVMEFS ENSBTAP00000013468/1-769 IAVHLCNALV CQVDNDHKEA VGKMGFVVTM LKLIQKKLLD KICDQVMEFS BACU016241/1-750 IAVHLCNALV CQ-------- --------TM LKLIQKKLLD KICDQVMEFS ENSTTRP00000011010/1-766 IAVHLCNALV CQVDNDHKEA VGKMGFVVTM LKLIQKKLLD KICDQVMEFS 551 600 bmy_08607T0/1-645 WSALWNITDE TPDNCEMFLN FNGMKLFLDC LKEFPEKQEL HRNMLGLLGN ENSP00000291900/1-766 WSALWNITDE TPDNCEMFLN FNGMKLFLDC LKEFPEKQEL HRNMLGLLGN ENSBTAP00000013468/1-769 WSALWNITDE TPDNCEMFLN FNGMKLFLDC LKEFPEKQEL HRNMLGLLGN BACU016241/1-750 WSALWNITDE TPDNCEMFLN FNGMKLFLDC LKEFPEKQEL HRNMLGLLGN ENSTTRP00000011010/1-766 WSALWNITDE TPDNCEMFLN FNGMKLFLDC LKEFPEKQEL HRNMLGLLGN 601 650 bmy_08607T0/1-645 VAEKSS---- ---------- GNLLESKADG IEVSYNACGV LSHIMFDGPE ENSP00000291900/1-766 VAEVKELRPQ LMTSQFISVF SNLLESKADG IEVSYNACGV LSHIMFDGPE ENSBTAP00000013468/1-769 VAEVKELRPQ LMTSQFISVF SNLLESKADG IEVSYNACGV LSHIMFDGPE BACU016241/1-750 VAEVKELRPQ LMTSQFISVF SNLLESKADG IEVSYNACGV LSHIMFDGPE ENSTTRP00000011010/1-766 VAEVKELRPQ LMTSQFISVF SNLLESKADG IEVSYNACGV LSHIMFDGPE 651 700 bmy_08607T0/1-645 AWGICEPQRE EVEERMWAAI QSWDINSRRN INYSG----- QVLP----PA ENSP00000291900/1-766 AWGVCEPQRE EVEERMWAAI QSWDINSRRN INYRSFEPIL RLLPQGISPV ENSBTAP00000013468/1-769 AWGICEPQRE EVEERMWAAI QSWDINSRRN INYRSFEPIL RLLPQGISPV BACU016241/1-750 AWGICEPQRE EVEERMWAAI QSWDINSRRN INYRSFEPIL RLLPQGISPV ENSTTRP00000011010/1-766 AWGICEPQRE EVEERMWAAI QSWDINSRRN INYRSFEPIL RLLPQGISPV 701 750 bmy_08607T0/1-645 DQRR--WD-- ---------- ---------- ---------A PPEGHDQDGN ENSP00000291900/1-766 SQHWATWALY NLVSVYPDKY CPLLIKEGGM PLLRDIIKMA TARQETKEMA ENSBTAP00000013468/1-769 SQHWATWALY NLVSVYPDKY CPLLIKEGGM PLLRDMIKMA TARQETKEMA BACU016241/1-750 SQHWATWALY NLVSVYPDKY CPLLIKEGGM PLLRDMIKMA TARQETKEMA ENSTTRP00000011010/1-766 SQHWATWALY NLVSVYPDKY CPLLIKEGGM PLLRDMIKMA TARQETKEMA 751 800 bmy_08607T0/1-645 RAAGDQGNGP QGY------ ENSP00000291900/1-766 RKVIEHCSNF KEENMDTSR ENSBTAP00000013468/1-769 RKVIEHCSNF KEENMDTSR BACU016241/1-750 RKVIEHCSNF KEENMDTSR ENSTTRP00000011010/1-766 RKVIEHCSNF KEENMDTSR