KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:35 2014 Check: 00 .. Name: ENSP00000078445/1-461 Len: 461 Check: 3253 Weight: 1.00 Name: ENSBTAP00000013478/1-456 Len: 461 Check: 2602 Weight: 1.00 Name: ENSTTRP00000009608/1-455 Len: 461 Check: 774 Weight: 1.00 Name: bmy_15839T0/1-457 Len: 461 Check: 4622 Weight: 1.00 Name: BACU002616/1-457 Len: 461 Check: 3785 Weight: 1.00 // 1 50 ENSP00000078445/1-461 MNTDLAAGKM ASAACSMDPI DSFELLDLLF DRQDGILRHV ELGEGWGHVK ENSBTAP00000013478/1-456 MDGDLAIGKM ASSTSPMGPI DSLELLDLLF DRQDGVLRHV ELGEDWGHGE ENSTTRP00000009608/1-455 MNGELAVGKM ASSTSLTCPT DSLELLDLLF DRQDGILRHI ELGEDWGHVE bmy_15839T0/1-457 MNGDSAVGKM ASSTSLTCPI DSLELLDLLF DRQDGILRHV ELGEDWGHVE BACU002616/1-457 MNGDSAVGKM ASSTSLTCPI DSLELLDLLF DRQDGILRHV ELGEDWGHVE 51 100 ENSP00000078445/1-461 DQQVLPNPDS DDFLSSILGS GDSLPSSPLW SPEGSDSGIS EDLPSDPQDT ENSBTAP00000013478/1-456 D-QVLPGADS DDFLNSILGS GDS--DSPTW SPAASDSGIS EDLPSDTQDT ENSTTRP00000009608/1-455 DQQVLPGPNS DDFLNSILGS GESVPSSPTW SPAASDSGIS EDLPSDPQDT bmy_15839T0/1-457 D-QVLPGPNS DDFLNSILGS GESVPSSPTW SPAASDSGIS EDLPSDPQDT BACU002616/1-457 D-QVLPGPNS DDFLNSILGS GESVPSSPTW SPAASDSGIS EDLPSDPQDT 101 150 ENSP00000078445/1-461 PPRSGPATSP AGCHPAQPGK GPCLSYHPGN SCSTTTPGPV IQVPEASVTI ENSBTAP00000013478/1-456 PPHGGVPATP AGCHSVESGK GPCPSYHPGP TCPARHLGPV APRLETSVAI ENSTTRP00000009608/1-455 PPHSGVAATP VSCHSTESGK GPCPSYHTGP ACPTRNLGPV AQGLEASVAI bmy_15839T0/1-457 PPHSGVAATP ASCHSAESGK GPCPSYHPGP ACPTRNLGPV AQGLEASVAI BACU002616/1-457 PPHSGVAATP ASCHSAESGK GPCPSYHPGP ACPTRNLGPV AQGLEASVAI 151 200 ENSP00000078445/1-461 DLEMWSPGGR ICAEKPADPV DLSPRCNLTV KDLLLSGSSG DLQQHHLGAS ENSBTAP00000013478/1-456 DLEMWSPG-- VYAEEQTDLA DSPSRYNLTV KDLLLSSSSG DLQQHHLAAP ENSTTRP00000009608/1-455 DLEMWSP--- -CAGEQAELA NSPPHCNLTV KDLLLSGSGG DLQQHNLAAP bmy_15839T0/1-457 DLEMWSPG-- LYAGEQAELA SSPPHCNLTV KDLLLSGSGG DLQHH-LAXP BACU002616/1-457 DLEMWSPG-- LYAGEQAELA SSPPHCNLTV KDLLLSGSGG DLQHH-LAAP 201 250 ENSP00000078445/1-461 YLLRPGAGHC QELVLTEDEK KLLAKEGITL PTQLPLTKYE ERVLKKIRRK ENSBTAP00000013478/1-456 HLLRPGTGHC QELVLTEDEK KLLAKEGITL PTQLPLTKYE ERMLKKIRRK ENSTTRP00000009608/1-455 NLLRLGTGLS QELVLTEDEK KLLAKEGITL PTQLPLTKYE ERVLKKIRRK bmy_15839T0/1-457 NLLRLGTGHS QELVLTEDEK KLLAKEGITL PTQLPLTKYE ERVLKKIRRK BACU002616/1-457 NLLRLGTGHS QELVLTEDEK KLLAKEGITL PTQLPLTKYE ERVLKKIRRK 251 300 ENSP00000078445/1-461 IRNKQSAQES RKKKKEYIDG LETRMSACTA QNQELQRKVL HLEKQNLSLL ENSBTAP00000013478/1-456 IRNKQSAQES RKKKKEYIDG LETRMSACTA QNQELQRKVL HLEKQNLSLL ENSTTRP00000009608/1-455 IRNKQSAQES RKKKKEYIDG LETRXXXXXX XXXXXXXXXX XXXXXXXSLL bmy_15839T0/1-457 IRNKQSAQES RKKKKEYIDG LETRMSACTA QNQELQRKVL HLEKQNLSLL BACU002616/1-457 IRNKQSAQES RKKKKEYIDG LETRMSACTA QNQELQRKVL HLEKQNLSLL 301 350 ENSP00000078445/1-461 EQLKKLQAIV VQSTSKSAQT GTCVAVLLLS FALIILPSIS PFGPNKTESP ENSBTAP00000013478/1-456 EQLKKLQAIV VQSTSKSAQT GTCIAVLLFS FALIVLPSIS PFASNRAESP ENSTTRP00000009608/1-455 EQLKKLQAIV VQSTSKSAQT GTCIAVLLFS FALIILPSIS PFASNKAESP bmy_15839T0/1-457 EQLKKLQAIV VQSTSKSAQT GTCIAVLLFS FALIILPSIS PFASNKAESP BACU002616/1-457 EQLKKLQAIV VQSTSKSAQT GTCIAVLLFS FALIILPSIS PFASNKAESP 351 400 ENSP00000078445/1-461 GDFAPVRVFS RTLHNDAASR VAADAVPGSE APGPRPEADT TREESPGSPG ENSBTAP00000013478/1-456 GDFAPVRVFS RTLHNDAASR VAPDTAPGSE APGPGPNTGA LQERSPGSPP ENSTTRP00000009608/1-455 GDFVPVRVFS RTLHNDAASR VAPNTVPGSE TPGHGPKAGT LQEGPPSSPR bmy_15839T0/1-457 GDFVPVRVFS RTLHNDAASR VAPNTVPGSE TPGHGPKAGT LQEGSPSSPQ BACU002616/1-457 GDFVPVRVFS RTLHNDAASR VAPKTVPGSE TPGHGPKAAT LQEGSPSSPQ 401 450 ENSP00000078445/1-461 ADWGFQDTAN LTNSTEELDN ATLVLRNATE GLGQVALLDW VAPGPSTGSG ENSBTAP00000013478/1-456 GEWESQDTRA LDNSTEDLDN STLVQGNSVK ELDQATLLDC APPEPAVSPG ENSTTRP00000009608/1-455 GNGGSRDPPA PDNSTEDLDN GTLVQGNSMK ELDRAALLDV --PGPSTWPK bmy_15839T0/1-457 GEWGSRDPPA PDNSTEDLDN GTLVQGNSMK ELDRATLLDC AQPEQALGPG BACU002616/1-457 EEWGSRDPPA PDNSTEDLDN GTLVQGNSMK ELDRTTLLDC AQPEQALGPG 451 500 ENSP00000078445/1-461 RAGLEAAGDE L ENSBTAP00000013478/1-456 HVGLEAAGGE L ENSTTRP00000009608/1-455 RVGLEVAVGE L bmy_15839T0/1-457 RVGLEVAGGE L BACU002616/1-457 RMGLEVAGGE L