KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:39 2014 Check: 00 .. Name: ENSTTRP00000008244/1-780 Len: 782 Check: 569 Weight: 1.00 Name: BACU010726/1-607 Len: 782 Check: 9140 Weight: 1.00 Name: bmy_08698T0/1-782 Len: 782 Check: 5826 Weight: 1.00 Name: ENSP00000298875/1-782 Len: 782 Check: 4731 Weight: 1.00 Name: ENSBTAP00000013500/1-782 Len: 782 Check: 4927 Weight: 1.00 // 1 50 ENSTTRP00000008244/1-780 -TSIIKLTTL SGVQEESALC YLLQVDEFRF LLDCGWDEHF SMDIIDSLRX BACU010726/1-607 ---------- -----MNALE HAM------- ---------- ---------- bmy_08698T0/1-782 MTSIIKLTTL SGVQEESALC YLLQVDEFRF LLDCGWDEHF SMDIIDSLRK ENSP00000298875/1-782 MTSIIKLTTL SGVQEESALC YLLQVDEFRF LLDCGWDEHF SMDIIDSLRK ENSBTAP00000013500/1-782 MTSIIKLTTL SGVQEESALC YLLQVDEFRF LLDCGWDEHF SMDIIDSLRK 51 100 ENSTTRP00000008244/1-780 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU010726/1-607 HVHQIDAVLL SHPDPLHLGA LPYAVGKLGL NCAIYATIPV YKMGQMFMYD bmy_08698T0/1-782 HVHQIDAVLL SHPDPLHLGA LPYAVGKLGL NCAIYATIPV YKMGQMFMYD ENSP00000298875/1-782 HVHQIDAVLL SHPDPLHLGA LPYAVGKLGL NCAIYATIPV YKMGQMFMYD ENSBTAP00000013500/1-782 HVHQIDAVLL SHPDPLHLGA LPYAVGKLGL NCAIYATIPV YKMGQMFMYD 101 150 ENSTTRP00000008244/1-780 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK GHGLSITPLP BACU010726/1-607 LYQSRHNTED FTLFTLDDVD AAFDKIQQLK FSQIVNLK-- ---------- bmy_08698T0/1-782 LYQSRHNTED FTLFTLDDVD AAFDKIQQLK FSQIVNLKGK GHGLSITPLP ENSP00000298875/1-782 LYQSRHNTED FTLFTLDDVD AAFDKIQQLK FSQIVNLKGK GHGLSITPLP ENSBTAP00000013500/1-782 LYQSRHNTED FTLFTLDDVD AAFDKIQQLK FSQIVNLKGK GHGLSITPLP 151 200 ENSTTRP00000008244/1-780 AGHMIGGTIW KIVKDGEEEI VYAVDFNHKR EIHLNGCSLE MLSRPSLLIT BACU010726/1-607 ---------- ---------- ---------- ---------- ---------- bmy_08698T0/1-782 AGHMIGGTIW KIVKDGEEEI VYAVDFNHKR EIHLNGCSLE MLSRPSLLIT ENSP00000298875/1-782 AGHMIGGTIW KIVKDGEEEI VYAVDFNHKR EIHLNGCSLE MLSRPSLLIT ENSBTAP00000013500/1-782 AGHMIGGTIW KIVKDGEEEI VYAVDFNHKR EIHLNGCSLE MLSRPSLLIT 201 250 ENSTTRP00000008244/1-780 DSFNATYVQP RRKQRDEQLL TNVLETLRGD GNVLIAVDTA GRVLELAQLL BACU010726/1-607 ---------- ---------- ANVLETLRGD GNVLIAVDTA GRVLELAQLL bmy_08698T0/1-782 DSFNATYVQP RRKQRDEQLL TNVLETLRGD GNVLIAVDTA GRVLELAQLL ENSP00000298875/1-782 DSFNATYVQP RRKQRDEQLL TNVLETLRGD GNVLIAVDTA GRVLELAQLL ENSBTAP00000013500/1-782 DSFNATYVQP RRKQRDEQLL TNVLETLRGD GNVLIAVDTA GRVLELAQLL 251 300 ENSTTRP00000008244/1-780 DQIWRTKDAG LGVYSLALLN NVSYNVVEFS KSQVEWMSDK LMRCFEDKRN BACU010726/1-607 DQIWRTKDAG LGVYSLALLN NVSYNVVEFS KSQVEWMSDK LMRCFEDKRN bmy_08698T0/1-782 DQIWRTKDAG LGVYSLALLN NVSYNVVEFS KSQVEWMSDK LMRCFEDKRN ENSP00000298875/1-782 DQIWRTKDAG LGVYSLALLN NVSYNVVEFS KSQVEWMSDK LMRCFEDKRN ENSBTAP00000013500/1-782 DQIWRTKDAG LGVYSLALLN NVSYNVVEFS KSQVEWMSDK LMRCFEDKRN 301 350 ENSTTRP00000008244/1-780 NPFQFRHLSL CHGLSDLARV PSPKVVLASQ PDLECGFSRD LFIQWCQDPK BACU010726/1-607 NPFQFRHLSL CHGLSDLARV PSPKVVLASQ PDLECGFSRD LFIQWCQDPK bmy_08698T0/1-782 NPFQFRHLSL CHGLSDLARV PSPKVVLASQ PDLECGFSRD LFIQWCQDPK ENSP00000298875/1-782 NPFQFRHLSL CHGLSDLARV PSPKVVLASQ PDLECGFSRD LFIQWCQDPK ENSBTAP00000013500/1-782 NPFQFRHLSL CHGLSDLARV PSPKVVLASQ PDLECGFSRD LFIQWCQDPK 351 400 ENSTTRP00000008244/1-780 NSIILTYRTT PGTLARFLID NPSEKITEIE LRKRVKLEGK ELEEYLEKEK BACU010726/1-607 NSIILTYRTT PGTLARFLID NPSEKITEIE LRKRVKLEGK ELEEYLEKEK bmy_08698T0/1-782 NSIILTYRTT PGTLARFLID NPSEKITEIE LRKRVKLEGK ELEEYLEKEK ENSP00000298875/1-782 NSIILTYRTT PGTLARFLID NPSEKITEIE LRKRVKLEGK ELEEYLEKEK ENSBTAP00000013500/1-782 NSIILTYRTT PGTLARFLID NPSEKVTEIE LRKRVKLEGK ELEEYLEKEK 401 450 ENSTTRP00000008244/1-780 LKKEAAKKLE QSKEADLDSS DESDVEEDID QPSVHKGKHD LMMKGEGSSK BACU010726/1-607 LKKEAAKKLE QSKEADIDSS DESDVEEDID QPSAHKTKHD LMMKGEGSRK bmy_08698T0/1-782 LKKEAAKKLE QSKEADIDSS DESDVEEDID QPSAHKTKHD LMMKGEGSRK ENSP00000298875/1-782 LKKEAAKKLE QSKEADIDSS DESDIEEDID QPSAHKTKHD LMMKGEGSRK ENSBTAP00000013500/1-782 LKKEAAKKLE QSKEADIDSS DESDAEEDID QPSAHKTKHD LMMKGEGSRK 451 500 ENSTTRP00000008244/1-780 GSFFKQAKKS YPMFPAPEER IKWEE-GESI KPEDFLVPEL QATEEEKSKL BACU010726/1-607 GSFFKQAKKS YPMFPAPEER IKWDEYGEI- ---------- ---------- bmy_08698T0/1-782 GSFFKQAKKS YPMFPAPEER IKWDEYGEII KPEDFLVPEL QATEEEKSKL ENSP00000298875/1-782 GSFFKQAKKS YPMFPAPEER IKWDEYGEII KPEDFLVPEL QATEEEKSKL ENSBTAP00000013500/1-782 GSFFKQAKKS YPMFPAPEER IKWDEYGEII KPEDFLVPEL QATEEEKSKL 501 550 ENSTTRP00000008244/1-780 ESGLTNGDEP MDQDLSDVPT KCISTTESIE IKARVTYIDY EGRSDGDSIK BACU010726/1-607 ---------- ---------- ---------- IKARVTYIDY EGRSDGDSIK bmy_08698T0/1-782 ESGLTNGDEP MDQDLSDVPT KCISTTESIE IKARVTYIDY EGRSDGDSIK ENSP00000298875/1-782 ESGLTNGDEP MDQDLSDVPT KCISTTESIE IKARVTYIDY EGRSDGDSIK ENSBTAP00000013500/1-782 ESGLTNGDEP MDQDLSDVPT KCISTTESIE IKARVTYIDY EGRSDGDSIK 551 600 ENSTTRP00000008244/1-780 KIINQMKPRQ LIIVHGPPEA SQDLAECCRG FGGKDIKVYM PKLHETVDAT BACU010726/1-607 KIINQMKPRQ LVIVHGPPEA SQDLAECCRG FGGKDIKVYM PKLHETVDAT bmy_08698T0/1-782 KIINQMKPRQ LVIVHGPPEA SQDLAECCRG FGGKDIKVYM PKLHETVDAT ENSP00000298875/1-782 KIINQMKPRQ LIIVHGPPEA SQDLAECCRA FGGKDIKVYM PKLHETVDAT ENSBTAP00000013500/1-782 KIINQMKPRQ LIIVHGPPEA SQDLAECCRA FGGKDIKVYM PKLHETVDAT 601 650 ENSTTRP00000008244/1-780 SETHIYQVRL KDSLVSSLQF CKAKDAELAW IDGVLDMRVS KVDTGVILEE BACU010726/1-607 SETHIYQVRL KDSLVSSLQF CKAKDAELAW IDGVLDMRVS KVDTGVILEE bmy_08698T0/1-782 SETHIYQVRL KDSLVSSLQF CKAKDAELAW IDGVLDMRVS RVDTGVILEE ENSP00000298875/1-782 SETHIYQVRL KDSLVSSLQF CKAKDAELAW IDGVLDMRVS KVDTGVILEE ENSBTAP00000013500/1-782 SETHIYQVRL KDSLVSSLQF CKAKDAELAW IDGVLDMRVS KVDTGVILEE 651 700 ENSTTRP00000008244/1-780 GELKDDGEDS EMQVDAPSDS SVIAQQKAMK SLFGDDEKET GEESEIIPTL BACU010726/1-607 GELKDDGEDS EMQVDAPSDS SVIAQQKAMK SLFGDDEKET GEESEIIPTL bmy_08698T0/1-782 GELKDDGEDS EMQVDAPSDS SVIAQQKAMK SLFGDDEKET GEESEIIPTL ENSP00000298875/1-782 GELKDDGEDS EMQVEAPSDS SVIAQQKAMK SLFGDDEKET GEESEIIPTL ENSBTAP00000013500/1-782 GELKDDGEDS EMQVDAPSDS SVIAQQKAMK SLFGDDEKET GEESEIIPTL 701 750 ENSTTRP00000008244/1-780 EPLPPHEVPG HQSVFMNEPR LSDFKQVLLR EGIQAEFVGG VLVCNNQVAV BACU010726/1-607 EPLPPHEVPG HQSVFMNEPR LSDFKQVLLR EGIQAEFVGG VLVCNNQVAV bmy_08698T0/1-782 EPLPPHEVPG HQSVFMNEPR LSDFKQVLLR EGIQAEFVGG VLVCNNQVAV ENSP00000298875/1-782 EPLPPHEVPG HQSVFMNEPR LSDFKQVLLR EGIQAEFVGG VLVCNNQVAV ENSBTAP00000013500/1-782 EPLPPHEVPG HQSVFMNEPR LSDFKQVLLR EGIQAEFVGG VLVCNNQVAV 751 800 ENSTTRP00000008244/1-780 RRTETGRIGL EGCLCQDFYR IRDLLYEQYA IV BACU010726/1-607 RRTETGRIGL EGCLCQDFYR IRDLLYEQYA IV bmy_08698T0/1-782 RRTETGRIGL EGCLCQDFYR IRDLLYEQYA IV ENSP00000298875/1-782 RRTETGRIGL EGCLCQDFYR IRDLLYEQYA IV ENSBTAP00000013500/1-782 RRTETGRIGL EGCLCQDFYR IRDLLYEQYA IV