KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:50:41 2014 Check: 00 .. Name: ENSP00000364580/1-336 Len: 343 Check: 2741 Weight: 1.00 Name: ENSBTAP00000013535/1-328 Len: 343 Check: 5984 Weight: 1.00 Name: bmy_15906T0/1-284 Len: 343 Check: 9747 Weight: 1.00 Name: ENSTTRP00000004205/1-271 Len: 343 Check: 2517 Weight: 1.00 // 1 50 ENSP00000364580/1-336 MQPAERSRVP RIDPYGFERP EDFDDAAYEK FFSSYLVTLT RRAIKWSRLL ENSBTAP00000013535/1-328 ---------- RIDPYGFERP EDFDYAAYEE FFSTYLVILT RRAIKWSKLL bmy_15906T0/1-284 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004205/1-271 ---------- ---------- ---------- -------ILT RRAIKWSRLL 51 100 ENSP00000364580/1-336 QGG-GVPRSR TVKRYVRKGV PLEHRARVWM VLSGAQAQMD QNPGYYHQLL ENSBTAP00000013535/1-328 KGGGGVQRSM TVKRYIRKGV PLEHRARVWM GVSGAQARMD RNPGYYQRLL bmy_15906T0/1-284 ---------M TLKRYIRKGV PLEHRARVWM GVSGAQAQMD RNPGYYRRLL ENSTTRP00000004205/1-271 KGGAGVQKSV TLKRYIRKGV PLEHRARVWM GVSGAQAQMD QNPGYYLHLL 101 150 ENSP00000364580/1-336 QGERNPRLED AIRTDLNRTF PDNVKFRKTT DPCLQRTLYN VLLAYGHHNQ ENSBTAP00000013535/1-328 QGERSASLEE AIRTDMNRTF PDNVRFRKDA EPCLQGPLYN VLLAYGHHNH bmy_15906T0/1-284 QGERDGSLEE AIRTDMNRTF PDNVRFRKGS EPCLQRTLYN VLLAYGHHNR ENSTTRP00000004205/1-271 QGEKDDSLEE AIRTDMNRTF PDNVRFRKGS DPCLQRTLYN VLLAYGHHNR 151 200 ENSP00000364580/1-336 GVGYCQGMNF IAGYLILITN NEEESFWLLD ALVGRILP-- ----DYYSPA ENSBTAP00000013535/1-328 GVGYCQGMNF IAGYLILVTK SEEEAFWLLD ALVGRILPA- ----DYYSPS bmy_15906T0/1-284 GVGYCQGMNF IAGYLILVTR SEEESFWLLD ALVGRILPGT LNPRDYYSPS ENSTTRP00000004205/1-271 GVGYCQGMNF LAGYLILVTR SEEESFWLLD ALVGRILP-- ----DYYSPS 201 250 ENSP00000364580/1-336 MLGLKTDQEV LGELVRAKLP AVGALMERLG VLWTLLVSRW FICLFVDILP ENSBTAP00000013535/1-328 MLGLKTDQEV LGELVRTKLP AVAALMHSHG VLWTLVASRW FICLFVDVLP bmy_15906T0/1-284 MLGLKTDQEV LGELVRTKLP AVAALMDSHG LLWTLVVSRW FICLFVDVLP ENSTTRP00000004205/1-271 MLGLKTDQEV LGELVRTKLP AVAALMDSHG LLWTLVVSRW FICLFVDVLP 251 300 ENSP00000364580/1-336 VETVLRIWDC LFNEGSKIIF RVALTLIKQH QELILEATSV PDICDKFKQI ENSBTAP00000013535/1-328 VETVLRVWDC LFSEGSKIIF RVALTLLKHH QASILEATSV PDLCEKFKEI bmy_15906T0/1-284 VETVLRIWDC LFNEGSKIIF RVALTLIKQH QALILEATSV PDICEKFKET ENSTTRP00000004205/1-271 VETVLRIWDC LFNEGSKIIF RVALTLIKEH QALILEATSV PDICEKFKDI 301 350 ENSP00000364580/1-336 TKGSFVMECH TFMQKIFSEP GSLSMATVAK LRESCRARLL AQG ENSBTAP00000013535/1-328 TRGRFVTECH SFMQRIFLEP GSLSRASIAR LRERCRARLL AQG bmy_15906T0/1-284 TRGSFTTECH TFMQKIFSEP GSLSRASIAR LRERCRARLL AQG ENSTTRP00000004205/1-271 TRGSFVTECH TFMR------ ---------- ---------- ---