KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:50:44 2014 Check: 00 .. Name: bmy_04563T0/1-311 Len: 350 Check: 477 Weight: 1.00 Name: ENSP00000363530/1-334 Len: 350 Check: 9630 Weight: 1.00 Name: ENSTTRP00000015318/1-338 Len: 350 Check: 7340 Weight: 1.00 Name: ENSBTAP00000013576/1-335 Len: 350 Check: 2486 Weight: 1.00 // 1 50 bmy_04563T0/1-311 MDNSRQKDQH SSKKYSRKAD KVQKGFTAAY PTQSSIPFKY QPSRIPESEK ENSP00000363530/1-334 MDNSAQKNER TG-KHPRRAS EVQKGFTAAY PTQSSIPFKS QASVIPESEK ENSTTRP00000015318/1-338 MDNSMQKDQH SGKKYSRKTD KVQKGFTAVY TTQSSIPVKY QPSRIPESEK ENSBTAP00000013576/1-335 MDNSTQKDQH SGKKYSRKAN KVQKGFTAAY PTQSSIPYKY QPLIIPESEK 51 100 bmy_04563T0/1-311 KGFNSQAKRF YHIKT----- --YEVKDKNP FLPPPPSLTQ NMTGRTRLSS ENSP00000363530/1-334 KGFNSQAKRF PHKKNDIPGP GFYNVIHQSP VS---NSVSL SKKGTCMFPS ENSTTRP00000015318/1-338 KGFNSQAKRF YHKKDDIPGP GFYNVIHQSP VF---DSVSL SRKGTCTFPS ENSBTAP00000013576/1-335 KGFNSQAKRF YHKQDDIPGP GFYNVIHQSP VF---DSVSL SKKGTCTFPS 101 150 bmy_04563T0/1-311 NNIKGKINGS NKPSFDNVLE LFLHFPLPYP LPQISVSLFL FDLERSAWVL ENSP00000363530/1-334 MCARLDTIIS KYPA-ANAYT IPSDFISKRD FSNSCSSMFQ LPSFMKALKF ENSTTRP00000015318/1-338 MCDRLDTIVS KYPA-ANAYT IPSRFVSKKD FSNSCSSMFQ LPSFVKVLKF ENSBTAP00000013576/1-335 MCARLDTIVS KFPA-ANAYT IPSRLVSKKD FSNSCSSMFQ LPSYEKVLKF 151 200 bmy_04563T0/1-311 VGP---HLTS VISPAESPGL M-----FSPL TSRGRKQLAD ARV----FQH ENSP00000363530/1-334 ETPAPNYYNA SVSCCKQRNN VCTRAGFMSK TQRGSFAFAD KGPPPGHYDI ENSTTRP00000015318/1-338 ETPAPNHYNA SVSCCKQANN VCARAGFMSK TQRGLFTITK TGPAPGHYNV ENSBTAP00000013576/1-335 ETPAPNQYNA SDSCCKQANN VCARAGFVSK TQRGLFTVSK TGPAPGHYDV 201 250 bmy_04563T0/1-311 LHSFFRLTRT FRITFFWRSH HTLVYGVGAG RGEKAERRKG VLQAALLGVV ENSP00000363530/1-334 NESLVKQSPN TLMSCFKSKT NRGLKLTSTG PGPGYYNPSD CTKVPKKTLF ENSTTRP00000015318/1-338 NESLVKQSPK ILMSCFKSKT GRGLKLMSTG PGPGYYNPGG HIEVQKKTLI ENSBTAP00000013576/1-335 NESLVKQSPK ILMSCFKSKT DRGLKLTSTG PGPGYYNPNG HPKVQKKTLI 251 300 bmy_04563T0/1-311 DSLNQKGFSD TKIP------ ---------- ---GLSRGAP SVTASHAEAR ENSP00000363530/1-334 PKNPILNFSA QPSPLPPKPP FPGPGQYEIV DYLGPRKHFI SSASFVSNTS ENSTTRP00000015318/1-338 PRNPILTFSA QPLPLPPKPP LPGPGQYEIV DYTGPPKHFV SSASFVSNTS ENSBTAP00000013576/1-335 PRNPILNFSA QPLPLPPKPP LPGPGQYEIV DYTGPRKHFI SSASFVSNTR 301 350 bmy_04563T0/1-311 RWS-GFTDEG AEAQGGDVPW GQTLALLSSG PCYHHFGHIS LTKGWMDALS ENSP00000363530/1-334 RWTAAPPQPG L---PGPATY KPEL------ PGKQSFLYNE DKK-WIPVL- ENSTTRP00000015318/1-338 RWTVAPSQPG LPGSPGPATY KPEF------ PGKQSFLYNG DKK-WIPVL- ENSBTAP00000013576/1-335 RWTAGPSQPG M---PGPATY RPEF------ PGKQSFLYNE DNK-WIPVL-