KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:45 2014 Check: 00 .. Name: bmy_19397T0/1-730 Len: 875 Check: 9238 Weight: 1.00 Name: BACU013987/1-857 Len: 875 Check: 9689 Weight: 1.00 Name: ENSBTAP00000013586/1-697 Len: 875 Check: 8756 Weight: 1.00 Name: ENSP00000307617/1-697 Len: 875 Check: 7687 Weight: 1.00 Name: ENSTTRP00000011358/1-696 Len: 875 Check: 7466 Weight: 1.00 // 1 50 bmy_19397T0/1-730 ---------- ---------- -----MCCAA AGAYARGVWL L--------- BACU013987/1-857 MSQKQMKEAF VSNHNGTSVL EITEGLCLPA LCILCRGLLI ILSQHLCSSS ENSBTAP00000013586/1-697 ---------- ---------- -------MAR LVAVCRD--- ---------- ENSP00000307617/1-697 ---------- ---------- -------MAR LVAVCRD--- ---------- ENSTTRP00000011358/1-696 ---------- ---------- -------MAR LVAVCRD--- ---------- 51 100 bmy_19397T0/1-730 ---------- ---------- ---------- ---------- ---------- BACU013987/1-857 HTWRTRFFID FAFLIVPLVT TLTIFASFVL LEYLVVIIFG AVLLYETYCR ENSBTAP00000013586/1-697 ---------- ---------- ---------- ---------- ---------- ENSP00000307617/1-697 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011358/1-696 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_19397T0/1-730 -----QAGAG RRLQRQ---- -ERRRRQQLG GGGDGGNGSV GDDGATGGSV BACU013987/1-857 RTCYARMPVG KILEKFLKIS LESEYIPAI- -----SCFRV INSAFTAVAI ENSBTAP00000013586/1-697 ---------G EEEFPF---- -ERRQIPLY- ---------- IDDTLT---- ENSP00000307617/1-697 ---------G EEEFPF---- -ERRQIPLY- ---------- IDDTLT---- ENSTTRP00000011358/1-696 ---------G EEEFPF---- -ERRQIPLY- ---------- IDDTLT---- 151 200 bmy_19397T0/1-730 QGRGGGVPLR EEADSPLHRR HPHDF---LK RI--PKRHSM LKQQDLSIAM BACU013987/1-857 LAVDFPLFPR RFAKTELYGT GAMDFGVGAF IFGTAMRHSM LKQQDLSIAM ENSBTAP00000013586/1-697 -------MVM EFPDNVLNLD GHQNNGTQLK QF--IQRHSM LKQQDLSIAM ENSP00000307617/1-697 -------MVM EFPDNVLNLD GHQNNGAQLK QF--IQRHGM LKQQDLSIAM ENSTTRP00000011358/1-696 -------MVM EFPDNVLNLD GHQNNGAQLK QF--IQRHSM LKQQDLSIAM 201 250 bmy_19397T0/1-730 VVTSREVLSA LSQLVPCVGC RRSVERLFSQ LVESGNPALE PLTVGPKGVL BACU013987/1-857 VVTSREVLSA LSQLVPCVGC RRSVERLFSQ LVESGNPALE PLTVGSKGVL ENSBTAP00000013586/1-697 VVTSREVLSA LSQLVPCVGC RRSVERLFSQ LVESGNPALE PLTVGPKGVL ENSP00000307617/1-697 VVTSREVLSA LSQLVPCVGC RRSVERLFSQ LVESGNPALE PLTVGPKGVL ENSTTRP00000011358/1-696 VVTSREVLSA LSQLVPCVGC RRSVERLFSQ LVESGNPALE PLTVGPKGVL 251 300 bmy_19397T0/1-730 SVTRSCMTDA KKLYTLFYVH GSKLNDMIDA IPKSKKNKRC QLHSLDTHKP BACU013987/1-857 SVTRSCMTDA KKLYTLFYVH GSKLNDMIDA IPKSKKNKRC QLHSLDTHKP ENSBTAP00000013586/1-697 SVTRSCMTDA KKLYTLFYVH GSKLNDMIDA IPKSKKNKRC QLHSLDTHKP ENSP00000307617/1-697 SVTRSCMTDA KKLYTLFYVH GSKLNDMIDA IPKSKKNKRC QLHSLDTHKP ENSTTRP00000011358/1-696 SVTRSCMTDA KKLYTLFYVH GSKLNDMIDA IPKSKKNKRC QLHSLDTHKP 301 350 bmy_19397T0/1-730 KPLGSYS--- ---------- ---------- ---------- ----VHGCFC BACU013987/1-857 KPLGEGSSSS VSSEKLSTDK RSSEDHRKDS KCRIIFHYGP FQGTARGCWM ENSBTAP00000013586/1-697 KPLG------ ---------- ---------- ---------- ------GCWM ENSP00000307617/1-697 KPLG------ ---------- ---------- ---------- ------GCWM ENSTTRP00000011358/1-696 KPLG------ ---------- ---------- ---------- ------GCWM 351 400 bmy_19397T0/1-730 PPSPSTVSQL PRQNC----- -LGLGVPVLN FEVFLFN--R FCTDCKNKVL BACU013987/1-857 -----DVWEL MSQECRDEVV LIDSSCLLET LETYLRKH-R FCTDCKNKVL ENSBTAP00000013586/1-697 -----DVWEL MSQECRDEVV LIDSSCLLET LETYLRKHSR FCTDCKNKVL ENSP00000307617/1-697 -----DVWEL MSQECRDEVV LIDSSCLLET LETYLRKH-R FCTDCKNKVL ENSTTRP00000011358/1-696 -----DVWEL MSQECRDEVV LIDSSCLLET LETYLRKH-R FCTDCKNKVL 401 450 bmy_19397T0/1-730 RAYNILIGEL DCSKEKGYCA ALYEGLRCCP HERHIHVCCE TDFIAHLLGR BACU013987/1-857 RAYNILIGEL DCSKEKGYCA ALYEGLRCCP HERHIHVCCE TDFIAHLLGR ENSBTAP00000013586/1-697 RAYNILIGEL DCSKEKGYCA ALYEGLRCCP HERHIHVCCE TDFIAHLLGR ENSP00000307617/1-697 RAYNILIGEL DCSKEKGYCA ALYEGLRCCP HERHIHVCCE TDFIAHLLGR ENSTTRP00000011358/1-696 RAYNILIGEL DCSKEKGYCA ALYEGLRCCP HERHIHVCCE TDFIAHLLGR 451 500 bmy_19397T0/1-730 AEPEFAGGYE RRERHAKTID IAQEEVLTCL GIHLYERLHR IWQKLRAEEQ BACU013987/1-857 AEPEFAGGYE RRERHAKTID IAQEEVLTCL GIHLYERLHR IWQKLRAEEQ ENSBTAP00000013586/1-697 AEPEFAGG-- RRERHAKTID IAQEEVLTCL GIHLYERLHR IWQKLRAEEQ ENSP00000307617/1-697 AEPEFAGG-- RRERHAKTID IAQEEVLTCL GIHLYERLHR IWQKLRAEEQ ENSTTRP00000011358/1-696 AEPEFAGG-- RRERHAKTID IAQEEVLTCL GIHLYERLHR IWQKLRAEEQ 501 550 bmy_19397T0/1-730 TWQMLFYLGV DALRKSFEMT VEKVQGISRL EQLCEEFSEE ERVRELKQEK BACU013987/1-857 TWQMLFYLGV DALRKSFEMT VEKVQGISRL EQLCEEFSEE ERVRELKQEK ENSBTAP00000013586/1-697 TWQMLFYLGV DALRKSFEMT VEKVQGISRL EQLCEEFSEE ERVRELKQEK ENSP00000307617/1-697 TWQMLFYLGV DALRKSFEMT VEKVQGISRL EQLCEEFSEE ERVRELKQEK ENSTTRP00000011358/1-696 TWQMLFYLGV DALRKSFEMT VEKVQGISRL EQLCEEFSEE ERVRELKQEK 551 600 bmy_19397T0/1-730 KRQKRKNRRK NKCVCDIPTP LQTADEKEVS QEKETDFIEN -SCKACGSTE BACU013987/1-857 KRQKRKNRRK NKCVCDIPTP LQTADEKE-- ---ETDFIEN -SCKACGSTE ENSBTAP00000013586/1-697 KRQKRKNRRK NKCVCDIPTP LQTADEKEVS QEKETDFIEN -SCKACGSTE ENSP00000307617/1-697 KRQKRKNRRK NKCVCDIPTP LQTADEKEVS QEKETDFIEN SSCKACGSTE ENSTTRP00000011358/1-696 KRQKRKNRRK NKCVCDIPTP LQTADEKEVS QEKETDFIEN -SCKACGSTE 601 650 bmy_19397T0/1-730 DGNSCVEVIV TNENTSCTCP SSGNLLGSPK IKKGLSPHCN GSDCGYSSSM BACU013987/1-857 DGNSCVEVIV TNENTSCTCP SSGNLLGSPK IKKGLSPHCN GSDCGYSSSM ENSBTAP00000013586/1-697 DGNSCVEVIV TNENTSCTCP TSGNLLGSPK IKKGLSPHCN GSDCGYSSSM ENSP00000307617/1-697 DGNTCVEVIV TNENTSCTCP SSGNLLGSPK IKKGLSPHCN GSDCGYSSSM ENSTTRP00000011358/1-696 DGNSCVEVIV TNENTSCTCP SSGNLLGSPK IKKGLSPHCN GSDCGYSSSM 651 700 bmy_19397T0/1-730 EGSETGSREG SDVACTEGIC NHDEHGDDSC VHHCEDKEDD GDSCVECWAN BACU013987/1-857 EGSETGSREG SDVACTEGIC NHDEHGDDSC VHHCEDKEDD GDSCVECWAN ENSBTAP00000013586/1-697 EGSETGSREG SDVACTEGIC NHDEHGDDSC VHHCEDKEDD GDSCVECWAN ENSP00000307617/1-697 EGSETGSREG SDVACTEGIC NHDEHGDDSC VHHCEDKEDD GDSCVECWAN ENSTTRP00000011358/1-696 EGSETGSREG SDVACTEGIC NHDEHGDDSC VHHCEDKEDD GDSCVECWAN 701 750 bmy_19397T0/1-730 SEENTTKGKN KKKKKKSKML KCDEHIQKLG SCITDPGNRE ASGNTVHTVF BACU013987/1-857 SEENTTKGKN KKKKKKSKML KCDEHIQKLG SCITDPGNRE ASGNTVHTVF ENSBTAP00000013586/1-697 SEENSTKGKN KKKKKKSKML KCDEHIQKLG SCITDPGTRE TSGNTVHTVF ENSP00000307617/1-697 SEENDTKGKN KKKKKKSKIL KCDEHIQKLG SCITDPGNRE TSGNTMHTVF ENSTTRP00000011358/1-696 SEENTTKGKN KKKKKKSKML KCDEHIQKLG SCITDPGNRE ASGNTVHTVF 751 800 bmy_19397T0/1-730 HRDKTKDTHP ESCCSSEKGG QPLPWFEHRK NVPQFAEPTE TSFGPDSGKG BACU013987/1-857 HRDKTKDTHP ESCCSSEKGG QPLPWFEHRK NVPQFAEPTE ASFGPDSGKG ENSBTAP00000013586/1-697 HRDKTKDAHP ESCCSSEKGG QPLAWFEHRK NVPQCAEPTE TSFGPDSGKG ENSP00000307617/1-697 HRDKTKDTHP ESCCSSEKGG QPLPWFEHRK NVPQFAEPTE TLFGPDSGKG ENSTTRP00000011358/1-696 HRDKTKDTHP ESCCTSEKGG QPLPWFEHRK NVPQFAEHTE TSFGPDSGKG 801 850 bmy_19397T0/1-730 AKSLVELLDE SECTSDEEIF ISQDEIQSFM ANNQSFYSNR EQYRQHLKEK BACU013987/1-857 AKSLVELLDE SECTSDEEIF ISQDEIQSFM ANNQSFYSNR EQYRQHLKEK ENSBTAP00000013586/1-697 AKSLVELLDE SECTSDEEIF ISQDEIQSFM ANNQSFYSNR EQYRQHLKEK ENSP00000307617/1-697 AKSLVELLDE SECTSDEEIF ISQDEIQSFM ANNQSFYSNR EQYRQHLKEK ENSTTRP00000011358/1-696 AKSLVELLDE SECTSDEEIF ISQDEIQSFM ANNQSFYSNR EQYRQHLKEK 851 900 bmy_19397T0/1-730 FNKYCRLNDH KSPICSGWLT TAGAN BACU013987/1-857 FNKYCRLNDH KSPICSGWLT TAGAN ENSBTAP00000013586/1-697 FNKYCRLNDH KRPICSGWLT TAGAN ENSP00000307617/1-697 FNKYCRLNDH KRPICSGWLT TAGAN ENSTTRP00000011358/1-696 FNKYCRLNDH KSPICSGWLT TAGAN