KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:50:49 2014 Check: 00 .. Name: ENSTTRP00000002715/1-968 Len: 991 Check: 4648 Weight: 1.00 Name: ENSBTAP00000013598/1-980 Len: 991 Check: 588 Weight: 1.00 Name: bmy_19560T0/1-876 Len: 991 Check: 6986 Weight: 1.00 Name: BACU005867/1-980 Len: 991 Check: 3508 Weight: 1.00 // 1 50 ENSTTRP00000002715/1-968 ---------- ---------L QLRLQQRRTQ EQLANQGIIP PLKSPPEFHE ENSBTAP00000013598/1-980 --IPDSHDST IIILIFISVL QLRLQQRRTQ EQLANQGIVP PLKSPPEFHE bmy_19560T0/1-876 ---------- ---------- ---------- ---------- ---------- BACU005867/1-980 MTLLGSEHSL LIRSKFRSVL QLRLQQRRTQ EQLANQGIIP PLKSPPEFHE 51 100 ENSTTRP00000002715/1-968 QRKRLDSGKA EDTLKHKVRN RSDRADVVKM HILQGSTAER SVPTAQMKLK ENSBTAP00000013598/1-980 QRKRLDSDKA EDTLKRKARS RSDRAAVVKM HILQASTAER SVPTAQMKLK bmy_19560T0/1-876 ---MTDASSG GD-------- --DKPQTTFV PLL------- ---------- BACU005867/1-980 QRKRLDSGKA EDTLKHKVRN RSDRADLVKM HILQASTAER SVPTAQMKLK 101 150 ENSTTRP00000002715/1-968 RARLADDLNE KIALRPGPLE LVEKNILPVD SAVKEAIKGN QVSFSKSADA ENSBTAP00000013598/1-980 RARLADDLNE KIALRPGPLE LVEKNILPVD SAVKEAIKGN QVTFSKSADA bmy_19560T0/1-876 ---------- -----PAPRC L--------- ----SNLHSN QVSFSKSADA BACU005867/1-980 RARLADDLNE KIALRPGPLE LVEKNIFPVD SAVKEALKGN QVSFSKSADA 151 200 ENSTTRP00000002715/1-968 FAFEED-SSD GLSPDQTRGE DLQGSAGSPP DMKATETPSA GPRGKTQDLI ENSBTAP00000013598/1-980 FAFEEDSSSD GLSPDQTRGE DLQGSAGSPP DTKAMETPLA GPRGTVQD-- bmy_19560T0/1-876 FAFEED-SSD GLSPDQTRGE DLQGSAGSPP DVKATETPLA GPRGKIQDLI BACU005867/1-980 FAFEED-SSD GLSPDQTRGE DLQGSAGSPP DVKATETPLA GPRGKIQDLI 201 250 ENSTTRP00000002715/1-968 SGSENERNDS APQPGNQSDP GKQGLGPLGN PVPVHAAVKX XXXXXXXXXX ENSBTAP00000013598/1-980 --SENERSDP APHPGNQPDP GKQGLGSLGT PITGHTAVK- --SKSLSDSK bmy_19560T0/1-876 SGSENERNDS PPQPGNQSDP GKQGLGPLGN PTPVHAAVK- --SKSLSDSK BACU005867/1-980 SGSENERNDS PPQPGNQSDP GKQGLGPLGN PVPVHAAVK- --SKSLSDSK 251 300 ENSTTRP00000002715/1-968 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013598/1-980 NRHKKPKDPK PKVKKLKYHQ YIPPDQKAEK SPPPMDSAYA RLLQQQQLFL bmy_19560T0/1-876 NRHKKPKDPK PKVKKLKYHQ YIPPDQKAEK SPPPMDSAYA RLLQQQQLFL BACU005867/1-980 NRHKKPKDPK PKVKKLKYHQ YIPPDQKAEK SPPPMDSAYA RLLQQQQLFL 301 350 ENSTTRP00000002715/1-968 XXXXXXXXXX XXXXXXXXXX XXXXEPNEQV VRNPNPPLAP LSNTPLSPAK ENSBTAP00000013598/1-980 QLQILSQQQQ HRFSYPGLHA APPKEPNEQM ARNPNASSAP LSNTPLSPAK bmy_19560T0/1-876 QLQILSQQQQ HRFSYPGLHQ AQLKEPNEQV VRNPNPSSAP LSNTPLSPAK BACU005867/1-980 QLQILSQQQQ HRFSYPGLHQ AQLKEPNEQV VRNPNPSSAP LSNTPLSPAK 351 400 ENSTTRP00000002715/1-968 NSFSGQTGVS SLKPGPLPSN LDDLKVSELR QQLRIRGLPV SGTKTALMDR ENSBTAP00000013598/1-980 NSFSGQTGVS SLKPGPLPSN LDDLKVSELR QQLRIRGLPV SGTKTALMDR bmy_19560T0/1-876 NSFSGQTGVS SLKPGPLPSN LDDLKVSELR QQLRIRGLPV SGTKTALMDR BACU005867/1-980 NSFSGQTGVS SLKPGPLPSN LDDLKVSELR QQLRIRGLPV SGTKTALMDR 401 450 ENSTTRP00000002715/1-968 LRPFQDCSGN PVPNFGDITT VTFPVTPSNA LPNYQSSPST GALSNGFYHF ENSBTAP00000013598/1-980 LRPFQDCSGN PVPNFGDITT VTFPVTPSNA LPSYQSSPST GALSNGFYHF bmy_19560T0/1-876 LRPFQDCSGN PVPNFGDITT VTFPVTPSNA LPNYQSSPPT GASSNGFYHF BACU005867/1-980 LRPFQDCSGN PVPNFGDITT VTFPVTPSNA LPNYQSSPPT GASSNGFYHF 451 500 ENSTTRP00000002715/1-968 GSTSSSPPIS PASSDLSVAG SLPDTFNDAS PSFGLHPSPV HACPEESLMG ENSBTAP00000013598/1-980 GSTSSSPPIS PASSDLSVAG SLPDTFNDAS PSFGLHPSPV PACAEETLMG bmy_19560T0/1-876 GSTSSSPPIS PASSDLSVAG SLPDTFNDAS PSFGLHPSPV HACPEESLVG BACU005867/1-980 GSTSSSPPIS PASSDLSVAG SLPDTFHDAS PSFGLHPSPV HVCPEESLVG 501 550 ENSTTRP00000002715/1-968 SLNGG-SIPP ELDGLDSEKD KMLVEKQKVI NELTWKLQQE QRQVEELRLQ ENSBTAP00000013598/1-980 SLNGG-SMLP ELDGLDSEKD KMLVEKQKVI NELTWKLQQE QRQVEELRLQ bmy_19560T0/1-876 SVNGG-CIPP ELDGLDSEKD KMLVEKQKVI NELTWKLQQE QRHVEELRLQ BACU005867/1-980 SLNGGCCIPP ELDGLDSEKD KMLVEKQKVI NELTWKLQQE QRHVEELRLQ 551 600 ENSTTRP00000002715/1-968 LQKHKRSHCP EKKLLPFPAA PIKQEDATSS CPFASPQIAX XXXXXXXXXX ENSBTAP00000013598/1-980 LQKHKRSGCP DKKPPPFPAA PIKQEDAVSS CPFSSRQTAM KRQSTGSEGQ bmy_19560T0/1-876 LQKQKRGSCA EKTLPPLPAA PVKQEDAACS CPFASPQRAV KRQSACSEGQ BACU005867/1-980 LQKQKRGSCP EKKLPPLPAA PVKQEDAAPS CPFASPQVAV RRPSACSEGQ 601 650 ENSTTRP00000002715/1-968 -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000013598/1-980 PPPPREDTQL LPLGSTHCAE PSGQTNVLSS TFLSPQCSPQ HSPLGAVKSP bmy_19560T0/1-876 -PPAREDAQL LPLGSTPCAE PSGQSSVLPS TFLSPQCSPQ HSPLGAVKSP BACU005867/1-980 -PPAREDAQL PPLGGTACAE PSGQTSVLPS TFLSPQSSPQ HSPLGAVKSP 651 700 ENSTTRP00000002715/1-968 XXXXXXXXXX XXXXLPASSG AQGEEHRVSS PVGSQVRTAQ NSGAREGHPS ENSBTAP00000013598/1-980 QHISLPPSPN NHYFLPPSSG AQGEEHRVSS PVSSQVCTAQ NSGAHEGHPP bmy_19560T0/1-876 QHISLPPSPN NHYFLPASSG AQGDEHRVSS PVGSQVRTAQ NSGAREGHPS BACU005867/1-980 QHISLPPSPN NHYFLPASSG TQGDEHRVSS PVGS-----Q NSGAREGHPS 701 750 ENSTTRP00000002715/1-968 SFSPQPSSLH PSFSGAQTDS SHGAGGNSCP KSPGVQQKMA GLHSSDKSGP ENSBTAP00000013598/1-980 SFSPQPPSLH PPFSGAAADS SHAVGGRPSP KSPGVQQKMA GLHSSDKAGP bmy_19560T0/1-876 SFSPQPSSLH PSFSGAQADS SHGAGGNSCP KSPGVQQKMA GLHSSDKSGP BACU005867/1-980 SFSAQPSSLH PSFSGAQADS SHGAGGNSCP KSPGVQQKMA GLHSSDKSGP 751 800 ENSTTRP00000002715/1-968 KFSLPSP-FS KSTSAVSEIS QPPSYEDAVK QQMTQSQQMD ELLDVLIESG ENSBTAP00000013598/1-980 KFPIPSPTFS KSTSAVSEIT QPPSYEDAVK QQMTRSQQMD ELLDVLIESG bmy_19560T0/1-876 KFSIPSPTFS KSTSAVSEIS QPPSYEDAVK QQMTQSQQMD ELLDVLIESG BACU005867/1-980 KFSIPSPTFS KSTSAVSEIS QPPSYEDAVK QQMTQSQQMD ELLDVLIESG 801 850 ENSTTRP00000002715/1-968 EMPADAREDH SCLQKVPKIP GSSRSPTAAL PAKPPASFEP ASAGGQLSFD ENSBTAP00000013598/1-980 EMPADAREDH SCLHRVPKIP GSSRSPTGAL P-KSSAAFEP ASAGGQLSFD bmy_19560T0/1-876 EMPADAREDH SCLQKVPKIP GSSRSPSAAL P-KPPASFEP ASAGGQLSFE BACU005867/1-980 EMPADAREDH SCLQKVPKIP GSSRSPTAAL P-KPPASFEP ASAGGQLSFD 851 900 ENSTTRP00000002715/1-968 HYGADSNEHL EVLLNSQSPL GKVGDVALLK IGSEEPPFDG MMDGFSGKAA ENSBTAP00000013598/1-980 HFGAESNEHL EVLLNSQSPL GKVSDTTLLK IGSEEPPFDG MMDGFSGKAA bmy_19560T0/1-876 HYGADSNEHL EVLLNSQSPL GKVGDVALLK IGSEEPPFDG MMDGFSGKAA BACU005867/1-980 HYGADSNEHL EVLLNSQSPL GKVGDVALLK LGSEEPPFDG MMDGFSGKAA 901 950 ENSTTRP00000002715/1-968 EDLFNAHEIL PGPLSPMQTQ YSPSSVDSSG LPLSFTESPW ESMEWLDITP ENSBTAP00000013598/1-980 EDLFNAHEIL PGPLSPMQTQ FSPSSVDSSG LPLSFTESPW ESMEWLDLTP bmy_19560T0/1-876 EDLFNAHEIL PGPLSPMQTQ YSPSSVDSSG LPLSFTESPW ESMEWLDITP BACU005867/1-980 EDLFNAHEIL PGPLSPMQTQ YSPSSVDSSG LPLSFTESPW ESMEWLDITP 951 1000 ENSTTRP00000002715/1-968 PSSTPSFSSL STGGPSIFNI DFLDVTDLNL NSPMDLHLQQ W ENSBTAP00000013598/1-980 PSSTPSFSSL STGGPSIFNI DFLDVTDLNL NSPMDLHLQQ W bmy_19560T0/1-876 PSSTPSFSSL PTGGPSIFNI DFLDVTDLNL NSPMDLHLQQ W BACU005867/1-980 PSSTPSFSSL PAGGPSIFNI DFLDVTDLNL NSPMDLHLQQ W