KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:50:54 2014 Check: 00 .. Name: ENSP00000250156/1-353 Len: 364 Check: 3534 Weight: 1.00 Name: ENSBTAP00000013616/1-360 Len: 364 Check: 8235 Weight: 1.00 Name: bmy_19395T0/1-206 Len: 364 Check: 5144 Weight: 1.00 Name: ENSTTRP00000011366/1-359 Len: 364 Check: 8702 Weight: 1.00 // 1 50 ENSP00000250156/1-353 MALLSTVRGA TW---GRLVT RHFSHAARHG ERPGGEELSR LLLDDLVPTS ENSBTAP00000013616/1-360 MALPPAVGTA TWPCCSLPLT RPFSQATRRW GRPGGEELGR LPLDDLASMP bmy_19395T0/1-206 MALLSAFGGA TWHCCGRLLT RPFSQAAGRG ERPGGEELSR LLLDDLAPTP ENSTTRP00000011366/1-359 MALLSAVGGA TWHCCGRLLT RPFSQASGRG ERPGGEELSR LLLDDVAPTP 51 100 ENSP00000250156/1-353 R----LELLF GMTPCLLALQ AARRSVARLL LQAGKAGLQG KRAELLRMAE ENSBTAP00000013616/1-360 RSAGGPELLF GLSPCLLALR AARRRVARLL LQACRSGLQG QRAELLRAAE bmy_19395T0/1-206 RPAWGQELLF GLSPCLLALR AARRRVARLL LQAGRSGLQG ERAELLRAAE ENSTTRP00000011366/1-359 RPAGGLELLF GLSPCLLALR AARRRVARLL LQAGRSRLQG ERAELLRAAE 101 150 ENSP00000250156/1-353 ARDIPVLRPR RQKLDTMCRY QVHQGVCMEV SPLRPRPWRE AGEASPGDDP ENSBTAP00000013616/1-360 ERAIPVLRPR RRELDVLCRH QVHQGVCMEV SPLRPRPWAE AEVARPGDDP bmy_19395T0/1-206 ARDIPVLRPR RRKLDVLCGY QVHQGVCMEV SPLRPRPWAE AGEARPGDDP ENSTTRP00000011366/1-359 ARDIPVLRPS RRKLDVLCRY QVHQGVCMEV SPLRSRPWAE AGEARPGDDP 151 200 ENSP00000250156/1-353 QQLWLVLDGI QDPRNFGAVL RSAHFLGVDK VITSRRN--S CPLTPVVSKS ENSBTAP00000013616/1-360 QQLWLVLEGL QDPRNLGAVL RSAHFLGVDK VITSRRN--S CPLTPVVSKA bmy_19395T0/1-206 QQLWLVLERL QDPRNLGAVL RSAHFLGVDK VITSRRNRHG LPLFPV---- ENSTTRP00000011366/1-359 QQLWLVFEGL QDPRNLGAVL RSAHFLGVDK VITSRRN--S CPLSPVVSKA 201 250 ENSP00000250156/1-353 SAGAMEVMDV FSTDDLTGFL QTKAQQGWLV AGTVGCPSTE DPQSSEIPIM ENSBTAP00000013616/1-360 SAGAMEVMDV FSTDDLAGFL QARARQGWLV AGTVGCPGPE IALSSKIPVT bmy_19395T0/1-206 ---------- ---------- ---------- -----CPNLE AQPSS----- ENSTTRP00000011366/1-359 SAGAMEVMDV FSTDDLAGFL QAKARQGWLV AGTVGCPGPE ISLSSEIPIT 251 300 ENSP00000250156/1-353 SCLEFLWERP TLLVLGNEGS GLSQEVQASC QLLLTILPRR QLPPGLESLN ENSBTAP00000013616/1-360 RCLDFLWDRP TLLVLGNEGS GLSRAVQASC QLLLTILPGR QLPPGLESLN bmy_19395T0/1-206 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011366/1-359 NCLEFLWDRP TLLVLGNEGS GLSREVQ-SC QLLLSIPARR QLLPELESLN 301 350 ENSP00000250156/1-353 --VSVAAGIL LHSICSQRKG FPTEGERRQL LQDPQEPSAR SEGLSMAQHP ENSBTAP00000013616/1-360 --VSVAAGIL LHSICSQRKG FPVERRREQL LHDPQDPSAS SEAARVAQHP bmy_19395T0/1-206 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011366/1-359 GLXXXXXXIL LHSICSQRTG FPVEGKREQP LQGPQGPSAS SEVPRVAQHP 351 400 ENSP00000250156/1-353 GLSSGPEKER QNEG ENSBTAP00000013616/1-360 GLSSGSEKKR QDGG bmy_19395T0/1-206 ---------- ---- ENSTTRP00000011366/1-359 GLSSG-EEER QDG-