KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:55 2014 Check: 00 .. Name: ENSBTAP00000013620/1-759 Len: 759 Check: 293 Weight: 1.00 Name: ENSP00000303248/1-757 Len: 759 Check: 6362 Weight: 1.00 Name: BACU010657/1-581 Len: 759 Check: 737 Weight: 1.00 Name: bmy_19035T0/1-574 Len: 759 Check: 9154 Weight: 1.00 Name: ENSTTRP00000015418/1-757 Len: 759 Check: 5145 Weight: 1.00 // 1 50 ENSBTAP00000013620/1-759 MTSRPVFLYI LIFGKYFAPG RAQNAPCDLG YFPCGNTTKC LPQQLQCNGV ENSP00000303248/1-757 MTSGSVFFYI LIFGKYFSHG GGQDVKCSLG YFPCGNITKC LPQLLHCNGV BACU010657/1-581 ---------- ---------- ---------- ---------- ---------- bmy_19035T0/1-574 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015418/1-757 MTSGPVFLYI LIFGKYFAPG SGQDVACALG YFPCGNTTKC LPQLLHCNGV 51 100 ENSBTAP00000013620/1-759 DDCENHVDED NCGDINGWST QFDRYYGNNY KMTSLYPSIV AETSECLVGS ENSP00000303248/1-757 DDCGNQADED NCGDNNGWSL QFDKYFASYY KMTSQYP-FE AETPECLVGS BACU010657/1-581 ---------- ---------- ---------- -MTSWYP-FV TETSECLVDS bmy_19035T0/1-574 ---------- ---------- ---------- -MTSWYP-FV TETSECLVGS ENSTTRP00000015418/1-757 DDCGNQEDED NCGDNNGWSM QLDKYFANYY KMTSWYP-FV AETSECLVGS 101 150 ENSBTAP00000013620/1-759 PPMQCICQGL ELECDEINLR AVPSVSSNVT FMSLRRNLIR KLPPNVFKRY ENSP00000303248/1-757 VPVQCLCQGL ELDCDETNLR AVPSVSSNVT AMSLQWNLIR KLPPDCFKNY BACU010657/1-581 VPMQCLCRGL ELDCDETNLR AVPSVSSNVT LMCLQNN--- ---------- bmy_19035T0/1-574 VPVQCLCRGL ELDCDETNLR AVPSVSSNVT LMSLKWNLIR KLPPDGFKKY ENSTTRP00000015418/1-757 VPVQCLCRGL ELDCDETNLR AVPSVSSNVT LMSLKWNLIR KLPPDGFKKY 151 200 ENSBTAP00000013620/1-759 HGLQTLCLQN NKIRSVSVYA FRGLYSLTKL YLSHNRITLL KPGVFEDLHR ENSP00000303248/1-757 HDLQKLYLQN NKITSISIYA FRGLNSLTKL YLSHNRITFL KPGVFEDLHR BACU010657/1-581 ---------- -KIRSVSVYA ---------- ---------- ----FRGLYS bmy_19035T0/1-574 HDLQ------ ---------- --------KL YLSHNRITFL KPGVFEDLHR ENSTTRP00000015418/1-757 HDLQKLCLQN NKIRSVSVYA FRGLHSLTKL YLSHNRITFL KPGVFEDLHR 201 250 ENSBTAP00000013620/1-759 LEWLIIEDNH LNRISPLTFY GLNSLILLVL MNNVLTRLPD KSLCQHMPRL ENSP00000303248/1-757 LEWLIIEDNH LSRISPPTFY GLNSLILLVL MNNVLTRLPD KPLCQHMPRL BACU010657/1-581 LTKLIIEENH LSRISPLTFY GLNSLILLAL MNNILTRLPD KPLCQHMPRL bmy_19035T0/1-574 LEWLIIEENH LSRISPLTFY GLNSLILL-- ---------- ---------- ENSTTRP00000015418/1-757 LEWLIIEENH LSRISPLTFY GLNSLILLAL MNNILTRLPD KPLCQHM-RL 251 300 ENSBTAP00000013620/1-759 HWLDFEGNHI HNLRNLTFIS CSNLTVLVMR KNKINHLSEN TFAPLQKLDE ENSP00000303248/1-757 HWLDLEGNHI HNLRNLTFIS CSNLTVLVMR KNKINHLNEN TFAPLQKLDE BACU010657/1-581 HW-------- ---------- ------LVMR KNKINHLGEN TFAPLQKLDE bmy_19035T0/1-574 ---DFEGNHI HNLRNLTFIS CSNLTVLVMR KNKINHLSEN TFAPLQKLDE ENSTTRP00000015418/1-757 HWLDFEGNHI HNLRNLTFIS CSNLTVLVMR KNKINHLSEN AFAPLQKLDE 301 350 ENSBTAP00000013620/1-759 LDLGSNKIEN LSPHIFKDLK ELSQLNLSYN PIQTIQANQF DNLIKLKSLS ENSP00000303248/1-757 LDLGSNKIEN LPPLIFKDLK ELSQLNLSYN PIQKIQANQF DYLVKLKSLS BACU010657/1-581 LDLGSNKIEN LSPLVFKDLK ELSQLNLSYN PIQKIQANQF DYLVKLKSL- bmy_19035T0/1-574 ---------- ---------- ----LNLSYN PIQKIQANQF DYLVKLKSLS ENSTTRP00000015418/1-757 LDLGSNKIEN LSSLVFKDLK ELSQLNLSYN PIQKIQANQF DYLVKLKSLS 351 400 ENSBTAP00000013620/1-759 LEGIEISNIQ QRMFRPLMNL SYIYFKRFQY CGYAPHVRIC KPNTDGLSSL ENSP00000303248/1-757 LEGIEISNIQ QRMFRPLMNL SHIYFKKFQY CGYAPHVRSC KPNTDGISSL BACU010657/1-581 ---------- ---------- ---YFKKFQY CGYAPHVRSC KPNTDGISSL bmy_19035T0/1-574 LEGIEISNIQ QRMFRPLTNL SHIYFKKFQY CGYAPHVRSC KPNTDGISSL ENSTTRP00000015418/1-757 LEGIEISNIQ QRMFRPLTNL SHIYFKKFQY CGYAPHVRSC KPNTDGISSL 401 450 ENSBTAP00000013620/1-759 EDLLASIIQR VFVWVVSAVT CFGNIFVICM RPYIRSENKL HAMSIISLCC ENSP00000303248/1-757 ENLLASIIQR VFVWVVSAVT CFGNIFVICM RPYIRSENKL YAMSIISLCC BACU010657/1-581 EDLLASIIQR VFVWVVSAVT CFGNIFVICM RPYIRSENKL HAMSIISLCC bmy_19035T0/1-574 EDLLASIIQR VFVWVVSAVT CFGNIFVICM RPYIRSENKL HAMSIISLCC ENSTTRP00000015418/1-757 EDLLASIIQR VFVWVVSAVT CFGNIFVICM RPYIRSENKL HAMSIISLCC 451 500 ENSBTAP00000013620/1-759 ADCLMGIYLF VIGAFDLKFR GEYNKHAQLW MESIHCQLLG SLAILSTEVS ENSP00000303248/1-757 ADCLMGIYLF VIGGFDLKFR GEYNKHAQLW MESTHCQLVG SLAILSTEVS BACU010657/1-581 ADCLMGIYLF LIGAFDLKFR GEYNKHAQLW MESIHCQLLG SLAILSTEVS bmy_19035T0/1-574 ADCLMGIYLF LIGAFDLKFR GEYNKHAQLW MESIHCQLLG SLAILSTEVS ENSTTRP00000015418/1-757 ADCLMGIYLF VIGAFDLKFR GEYNKHAQLW MESIHCQLLG SLAILSTEVS 501 550 ENSBTAP00000013620/1-759 VLLLTFLTLE KYICIVYPFR CLRPGKCRTI TVLILIWIIG VIVAFIPLSN ENSP00000303248/1-757 VLLLTFLTLE KYICIVYPFR CVRPGKCRTI TVLILIWITG FIVAFIPLSN BACU010657/1-581 VLLLTFLTVE KYICIVYPFR CLRPGKCRTI TVLILIWIIG FIVAFIPLSN bmy_19035T0/1-574 VLLLTFLTVE KYICIVYPFR CLRPGKCRTI TVLILIWIIG FIVAFIPLSN ENSTTRP00000015418/1-757 VLLLTFLTVE KYICIVYPFR CLRPGKGRTI TVLILIWIIG FIVAFIPLSN 551 600 ENSBTAP00000013620/1-759 KEFFKNYYGT NGVCFPLHSE DAESTGAQIY SVAIFLGINL AAFIIIVFSY ENSP00000303248/1-757 KEFFKNYYGT NGVCFPLHSE DTESIGAQIY SVAIFLGINL AAFIIIVFSY BACU010657/1-581 KEFFKNYYGT NGVCFPLHSE DTESIGAQIY SVAIFLGINL AAFIIIVFSY bmy_19035T0/1-574 KEFFKNYYGT NGVCFPLHSE DTESXGAQIY SVAIFLGINL AAFIIIVFSY ENSTTRP00000015418/1-757 KEFFKNYYGT NGVCFPLHSE DTESTGAQIY SVAIFLGIKL AAFIIIVFSY 601 650 ENSBTAP00000013620/1-759 GSMFYSIHQS AITANEIRNQ VKKEMILAKR FFFIVFTDAL CWIPIFILKF ENSP00000303248/1-757 GSMFYSVHQS AITATEIRNQ VKKEMILAKR FFFIVFTDAL CWIPIFVVKF BACU010657/1-581 GSMFYSIHQS AITATKVRNQ VRKEMILAKR FFFIVFTDAL CWIPIFILKF bmy_19035T0/1-574 GSMFYSIHQS AITATKVRNQ VRKEMILAKR ---------- ---------- ENSTTRP00000015418/1-757 GSMFYSIHAS AITATEVRNQ VRKEMILAKR FFFIVFTDAL CWIPIFILKF 651 700 ENSBTAP00000013620/1-759 LSLLQVEIPG TITSWVVIFI LPINSALNPI LYTLTTRPFK EMIHQFWYNY ENSP00000303248/1-757 LSLLQVEIPG TITSWVVIFI LPINSALNPI LYTLTTRPFK EMIHRFWYNY BACU010657/1-581 LSLLQVEIPG TITSWVVIFI LPINSALNPI LYTLTTRPFK EMIHQFWYNY bmy_19035T0/1-574 ---------- TITSWVVIFI LPINSALNPI LYTLTTRPFK EMIHQFWYNY ENSTTRP00000015418/1-757 LSLLQVEIPC TITSWVVIFI LPINSALNPI LYTLTTRPFK EMIHQFWYNY 701 750 ENSBTAP00000013620/1-759 RQRRSIDSKG SQKTYAPSFI WVEMWPMQEM PSELMEPVLF ADSSELSLIS ENSP00000303248/1-757 RQRKSMDSKG -QKTYAPSFI WVEMWPLQEM PPELMKPDLF TYPCEMSLIS BACU010657/1-581 RQRRSIDSKG SQKTYAPSFI WVEMWPLQEM PSELMKPALF TDPCELSLIS bmy_19035T0/1-574 RQRRSIDSKG SQKTYAPSFI WVEMWPLQEV PSELMKPALF TDPCELSLIS ENSTTRP00000015418/1-757 RQRRSIDSKG SQKTYAPSFI WVEMWPLQEM PSELMKPALF TDPCELSLIS 751 800 ENSBTAP00000013620/1-759 QSTKLNSYS ENSP00000303248/1-757 QSTRLNSYS BACU010657/1-581 QSTRLNSYS bmy_19035T0/1-574 QSTRLNSYS ENSTTRP00000015418/1-757 QSTRLNSYS