KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:50:56 2014 Check: 00 .. Name: ENSBTAP00000013621/1-1124 Len: 1137 Check: 2813 Weight: 1.00 Name: ENSP00000302790/1-1125 Len: 1137 Check: 2201 Weight: 1.00 Name: ENSTTRP00000009059/1-1122 Len: 1137 Check: 7491 Weight: 1.00 Name: bmy_00807T0/1-1111 Len: 1137 Check: 7089 Weight: 1.00 Name: BACU011890/1-1123 Len: 1137 Check: 5841 Weight: 1.00 // 1 50 ENSBTAP00000013621/1-1124 -ASEEASLRA LESLMTEFFH DCTTNERKRE IEELLNNFAQ QIGAWRFCLY ENSP00000302790/1-1125 MASEEASLRA LESLMTEFFH DCTTNERKRE IEELLNNFAQ QIGAWRFCLY ENSTTRP00000009059/1-1122 -ASEEASLRA LESLMTEFFH DCTTNERKRE IEELLNNFAQ QIGAWRFCLY bmy_00807T0/1-1111 ---------- ----MTEFFH DCTTNERKRE IEELLNNFAQ QIGAWRFCLY BACU011890/1-1123 ---------- ----MTEFFH DCTTNERKRE IEELLNNFAQ QIGAWRFCLY 51 100 ENSBTAP00000013621/1-1124 FLSSTRNDYV MMYSLTVFEN LINKMWLGVP SQDKMEIRSC LPKLLLAHHK ENSP00000302790/1-1125 FLSSTRNDYV MMYSLTVFEN LINKMWLGVP SQDKMEIRSC LPKLLLAHHK ENSTTRP00000009059/1-1122 FLSSTRNDYV MMYSLTVFEN LINKMWLGVP SQDKMEIRSC LPKLLLAHHK bmy_00807T0/1-1111 FLSSTRNDYV MMYSLTVFEN LINKMWLGVP SQDKMEIRSC LPKLLLAHHK BACU011890/1-1123 FLSSTRNDYV MMYSLTVFEN LINKMWLGVP SQDKMEIRSC LPKLLLAHHK 101 150 ENSBTAP00000013621/1-1124 TLPYFIRNKL CKVIVDIGRQ DWPMFYHDFF TNILQLIQSP VTTPLGLIML ENSP00000302790/1-1125 TLPYFIRNKL CKVIVDIGRQ DWPMFYHDFF TNILQLIQSP VTTPLGLIML ENSTTRP00000009059/1-1122 TLPYFIRNKL CKVIVDIGRQ DWPMFYHDFF TNILQLIQSP VTTPLGLIML bmy_00807T0/1-1111 TLPYFIRNKL CKVIVDIGRQ DWPMFYHDFF TNILQLIQSP VTTPLGLIML BACU011890/1-1123 TLPYFIRNKL CKVIVDIGRQ DWPMFYHDFF TNILQLIQSP VTTPLGLIML 151 200 ENSBTAP00000013621/1-1124 KTTSEELACP REDLSVARKE ELRKLLLDQV QTVLGLLTGI LETVWDKHSV ENSP00000302790/1-1125 KTTSEELACP REDLSVARKE ELRKLLLDQV QTVLGLLTGI LETVWDKHSV ENSTTRP00000009059/1-1122 KTTSEELACP REDLSVARKE ELRKLLLEQV QTVLGLLTGI LETVWDKHSV bmy_00807T0/1-1111 KTTSEELACP REDLSVARKE ELRKLLLEQV QTVLGLLTGI LETVWDKHSV BACU011890/1-1123 KTTSEELACP REDLSVARKE ELRKLLLEQV QTVLGLLTGI LETVWDKHSV 201 250 ENSBTAP00000013621/1-1124 TAATPPPSPT SGESGDLLSN LLQSPSSAKL LNQPIPILDA ESEYICSLAL ENSP00000302790/1-1125 TAATPPPSPT SGESGDLLSN LLQSPSSAKL LNQPIPILDV ESEYICSLAL ENSTTRP00000009059/1-1122 TAATPPPSPT SGESGDLLSN LLQSPSSAKL LNQPIPILDV ESEYICSLAL bmy_00807T0/1-1111 TAATPPPSPT SGESGDLLSN LLQSPSSAKL LNQPIPILDV ESEYICSLAL BACU011890/1-1123 TAATPPPSPT SGESGDLLSN LLQSPSSAKL LNQPLPILDA ESEYICSLAL 251 300 ENSBTAP00000013621/1-1124 ECLAHLFSWI PLSASITPSL LTTIFHFARF GCDIRARKMA SVNGSSQNCV ENSP00000302790/1-1125 ECLAHLFSWI PLSASITPSL LTTIFHFARF GCDIRARKMA SVNGSSQNCV ENSTTRP00000009059/1-1122 ECLAHLFSWI PLSASITPSL LTTIFHFARF GCDIRARKMA SVNGSSQNCV bmy_00807T0/1-1111 ECLAHLFSWI PLSASITPSL LTTIFHFARF GCDIRARKMA SVNGSSQNCV BACU011890/1-1123 ECLAHLFSWI PLSASITPSL LTTIFHFARF GCDIRARKMA SVNGSSQNCV 301 350 ENSBTAP00000013621/1-1124 LGQERGRLGV LAMSCINELM SKNCVPMEFE EYLLRMFQQT FYLLQKITKD ENSP00000302790/1-1125 SGQERGRLGV LAMSCINELM SKNCVPMEFE EYLLRMFQQT FYLLQKITKD ENSTTRP00000009059/1-1122 LGQERGRLGV LAMSCINELM SKNCVPMEFE EYLLRMFQQT FYLLQKITKD bmy_00807T0/1-1111 LGQERGRLGV LAMSCINELM SKNCVPMEFE EYLLRMFQQT FYLLQKITKD BACU011890/1-1123 LGQERGRLGV LAMSCINELM SKNCVPMEFE EYLLRMFQQT FYLLQKITKD 351 400 ENSBTAP00000013621/1-1124 NNAHTVKSRL EELDESYIEK FTDFLRLFVS VHLRRIESYS QFPVVEFLTL ENSP00000302790/1-1125 NNAHTVKSRL EELDESYIEK FTDFLRLFVS VHLRRIESYS QFPVVEFLTL ENSTTRP00000009059/1-1122 NNAHTVKSRL EELDESYIEK FTDFLRLFVS VHLRRIESYS QFPVVEFLTL bmy_00807T0/1-1111 NNAHTVKSRL EELDESYIEK FTDFLRLFVS VHLRRIESYS QFPVVEFLTL BACU011890/1-1123 NNAHTVKSRL EELDESYIEK FTDFLRLFVS VHLRRIESYS QFPVVEFLTL 401 450 ENSBTAP00000013621/1-1124 LFKYTFHQPT HEGYFSCLDI WTLFLDYLTS KIKSRLGDKE AVLNRYEDAL ENSP00000302790/1-1125 LFKYTFHQPT HEGYFSCLDI WTLFLDYLTS KIKSRLGDKE AVLNRYEDAL ENSTTRP00000009059/1-1122 LFKYTFHQPT HEGYFSCLDI WTLFLDYLTS KIKSRLGDKE AVLNRYEDAL bmy_00807T0/1-1111 LFKYTFHQPT HEGYFSCLDI WTLFLDYLTS KIKSRLGDKE AVLNRYEDAL BACU011890/1-1123 LFKYTFHQPT HEGYFSCLDI WTLFLDYLTS KIKSRLGDKE AVLNRYEDAL 451 500 ENSBTAP00000013621/1-1124 VLLLTEVLNR IQFRYNQAQL EELDDETLDD DQQTEWQRYL RQSLEVVAKV ENSP00000302790/1-1125 VLLLTEVLNR IQFRYNQAQL EELDDETLDD DQQTEWQRYL RQSLEVVAKV ENSTTRP00000009059/1-1122 VLLLTEVLNR IQFRYNQAQL EELDDETLDD DQQTEWQRYL RQSLEVVAKV bmy_00807T0/1-1111 VLLLTEVLNR IQFRYNQAQL EELDDETLDD DQQTEWQRYL RQSLEVVAKV BACU011890/1-1123 VLLLTEVLNR IQFRYNQAQL EELDDETLDD DQQTEWQRYL RQSLEVVAKV 501 550 ENSBTAP00000013621/1-1124 MELLPTHAFS TLFPVLQDNL EVYLGLQQFI VTSGS----- -------GPR ENSP00000302790/1-1125 MELLPTHAFS TLFPVLQDNL EVYLGLQQFI VTSGS----- -------GHR ENSTTRP00000009059/1-1122 MELLPTHAFS TLFS-LQDNL EV-LGLQQFI VTSAS----- -------GHR bmy_00807T0/1-1111 MELLPTHAFS TLFPVLQDNL EVYLGLQQFI VTSAS----- -------GHR BACU011890/1-1123 MELLPTHAFS TLFPVLQDNL EVYLGLQQFI VTSASVKSKA KHAVPVLGHR 551 600 ENSBTAP00000013621/1-1124 LNITAENDCR RLHCSLRDLS SLLQAVGRLA EYFTGDVFAA RFSDALTVVE ENSP00000302790/1-1125 LNITAENDCR RLHCSLRDLS SLLQAVGRLA EYFIGDVFAA RFNDALTVVE ENSTTRP00000009059/1-1122 LNITAENDCR RLHCSLRDLS SLLQAVGRLA EYFIGDVFVV RFSDALTVVE bmy_00807T0/1-1111 LNITAENDCR RLHCSLRDLS SLLQAVGRLA EYFIGDVFAV RFSDALTVVE BACU011890/1-1123 LNITAENDCR RLHCSLRDLS SLLQAVGRLA EYFIGDVFAV RFSDALTVVE 601 650 ENSBTAP00000013621/1-1124 RLVKVTLYGS QIKLYNIETA VPSVLKPDLI DVHAQSLAAL QAYSHWLAQY ENSP00000302790/1-1125 RLVKVTLYGS QIKLYNIETA VPSVLKPDLI DVHAQSLAAL QAYSHWLAQY ENSTTRP00000009059/1-1122 RLVKVTLYGS QIKLYNIETA VPSVLKPDLI DVHAQSLAAL QAYSHWLAQY bmy_00807T0/1-1111 RLVKVTLYGS QIKLYNIETA VPSVLKPDLI DVHAQSLAAL QAYSHWLAQY BACU011890/1-1123 RLVKVTLYGS QIKLYNIETA VPSVLKPDLI DVHAQSLAAL QAYSHWLAQY 651 700 ENSBTAP00000013621/1-1124 CSEAHRQNTQ QFVSLISTTM DAITPLITTK VQDKLLLSAC HLLVSLATTV ENSP00000302790/1-1125 CSEVHRQNTQ QFVTLISTTM DAITPLISTK VQDKLLLSAC HLLVSLATTV ENSTTRP00000009059/1-1122 CSEAHRQNTQ QFVTLISTTM DAVTPLISTK VQDKLLLSAC HLLVSLATTV bmy_00807T0/1-1111 CSEAHRQNTQ QFVTLISTTM DAVTPLISTK VQDKLLLSAC HLLVSLATTV BACU011890/1-1123 CSEAHRQNTQ QFVTLISTTM DAVTPLISTK VQDKLLLSAC HLLVSLATTV 701 750 ENSBTAP00000013621/1-1124 RPVFLISIPA VQKVFNRITD ASAQRLVDKA QVLVCRALSN ILLLPWPNLP ENSP00000302790/1-1125 RPVFLISIPA VQKVFNRITD ASALRLVDKA QVLVCRALSN ILLLPWPNLP ENSTTRP00000009059/1-1122 RPVFLISIPA VQKVFNRITD ASAQRLVDKA QVLVCRALSN ILLLPWPNLP bmy_00807T0/1-1111 RPVFLISIPA VQKVFNRITD ASAQRLVDKA QVLVCRALSN ILLLPWPNLP BACU011890/1-1123 RPVFLISIPA VQKVFNRITD ASAQRLVDKA QVLVCRALSN ILLLPWPNLP 751 800 ENSBTAP00000013621/1-1124 ENEQQWPVRS MNHASLISAL SRDYRNLKPN AVTPQRKMPL DDTKVIIHQT ENSP00000302790/1-1125 ENEQQWPVRS INHASLISAL SRDYRNLKPS AVAPQRKMPL DDTKLIIHQT ENSTTRP00000009059/1-1122 ENEQQWPVRS INHASLISAL SRDYHNLKPN AVAPQRKMPL DDTKVIIHQT bmy_00807T0/1-1111 ENEQQWPVRS INHASLISAL SRDYHNLKPS AVAPQRKMPL DDTKVIIHQT BACU011890/1-1123 ENEQQWPVRS INHASLISAL SRDYHNLKPN AVAPQRKMPL DDTKVIIHQT 801 850 ENSBTAP00000013621/1-1124 LSVLEDIVEN ISGESTKSRQ ICYQSLQESV QVSLALFPAF IHQSDVTDEM ENSP00000302790/1-1125 LSVLEDIVEN ISGESTKSRQ ICYQSLQESV QVSLALFPAF IHQSDVTDEM ENSTTRP00000009059/1-1122 LSVLEDIVEN ISGESTKSRQ ICYQSLQESV QVSLALFPAF IHQSHVTDEM bmy_00807T0/1-1111 LSVLEDIVEN ISGESTKSRQ ICYQSLQESV QVSLALFPAF IHQSDVTDEM BACU011890/1-1123 LSVLEDIVEN ISGESTKSRQ ICYQSLQESV QVSLALFPAF IHQSDVTDEM 851 900 ENSBTAP00000013621/1-1124 LSFFLTLFRG LRVQMGVPFT EQIIQTFLNM FTREQLAESI LHEGSTGCRV ENSP00000302790/1-1125 LSFFLTLFRG LRVQMGVPFT EQIIQTFLNM FTREQLAESI LHEGSTGCRV ENSTTRP00000009059/1-1122 LSFFLTLFRG LRVQMGVPFT EQIIQTFLNM FTREQLAESI LHEGSTGCRV bmy_00807T0/1-1111 LSFFLTLFRG LRVQMGVPFT EQIIQTFLNM FTREQLAESI LHEGSTGCRV BACU011890/1-1123 LSFFLTLFRG LRVQMGVPFT EQIIQTFLNM FTREQLAESI LHEGSTGCRV 901 950 ENSBTAP00000013621/1-1124 VEKFLKILQV VVQEPGQVFK PFLPSIIALC MEQVYPIIAE RPSPDVKAEL ENSP00000302790/1-1125 VEKFLKILQV VVQEPGQVFK PFLPSIIALC MEQVYPIIAE RPSPDVKAEL ENSTTRP00000009059/1-1122 VEKFLKILQV VVQEPGQVFK PFLPSIISLC MEQVYPIIAE RPSPDVKAEL bmy_00807T0/1-1111 VEKFLKILQV VVQEPGQVFK PFLPSIIALC MEQVYPIIAE RPSPDVKAEL BACU011890/1-1123 VEKFLKILQV VVQEPGQVFK PFLPSIISLC MEQVYPIIAE RPSPDVKAEL 951 1000 ENSBTAP00000013621/1-1124 FELLFRTLHH NWRYFFKSTI LASVQRGMAE EQMENQPQFS AIMQAFGQSF ENSP00000302790/1-1125 FELLFRTLHH NWRYFFKSTV LASVQRGIAE EQMENEPQFS AIMQAFGQSF ENSTTRP00000009059/1-1122 FELLFRTLHH NWRYFFKSTV LASVQRGIAE EQMENEPQFS AIMQAFGQSF bmy_00807T0/1-1111 FELLFRTLHH NWRYFFRSTV LASVQRGIAE EQMENEPQFS AIMQAFGQSF BACU011890/1-1123 FELLFRTLHH NWRYFFRSTV LASVQRGIAE EQMENEPQFS AIMQAFGQSF 1001 1050 ENSBTAP00000013621/1-1124 LQPDIHLFKQ NLFYLETLNT KQKLYHKKIF RSAMLFQFVN VLLQVLVCRS ENSP00000302790/1-1125 LQPDIHLFKQ NLFYLETLNT KQKLYHKKIF RTAMLFQFVN VLLQVLVHKS ENSTTRP00000009059/1-1122 LQPDIHLFKQ NLFYLETLNT KQKLYHKKIF RTTMLFQFVN VLLQVLVHKS bmy_00807T0/1-1111 LQPDIHLFKQ NLFYLETLNT KQKLYHKKIF RTTMLFQFVN VLLQVLVHKS BACU011890/1-1123 LQPDIHLFKQ NLFYLETLNT KQKLYHKKIF RTTMLFQFVN VLLQVLVHKS 1051 1100 ENSBTAP00000013621/1-1124 HDLLQEDIGI AIYNMASVDF DGFFTAFLPE FLTSCDGVDA NQKNVLGRNF ENSP00000302790/1-1125 HDLLQEEIGI AIYNMASVDF DGFFAAFLPE FLTSCDGVDA NQKSVLGRNF ENSTTRP00000009059/1-1122 HDLLQEEIGI AIYNMASVDF DGFFAAFLPE FLTSCDGVDA NQKNVLGRNF bmy_00807T0/1-1111 HDLLQEEIGI AIYNMASVDF DGFFAAFLPE FLTSCDGVDA NQKNVLGRNF BACU011890/1-1123 HDLLQEEIGI AIYNMASVDF DGFFAAFLPE FLTSCDGVDA NQKNVLGRNF 1101 1150 ENSBTAP00000013621/1-1124 KMDRDLPSFT QNVHRLVNDL RYYRLCNDSL PPGTVKL ENSP00000302790/1-1125 KMDRDLPSFT QNVHRLVNDL RYYRLCNDSL PPGTVKL ENSTTRP00000009059/1-1122 KMDRDLPSFT QSVHRLVNDL RYYRLCNDSL PPGTVKL bmy_00807T0/1-1111 KMDRDLPSFT QSVHRLVNDL RYYRLCNDSL PPGTVKL BACU011890/1-1123 KMDRDLPSFT QSVHRLVNDL RYYRLCNDSL PPGTVKL