KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:50:59 2014 Check: 00 .. Name: ENSP00000336808/1-425 Len: 475 Check: 1187 Weight: 1.00 Name: ENSBTAP00000013637/1-425 Len: 475 Check: 8500 Weight: 1.00 Name: bmy_18005T0/1-299 Len: 475 Check: 8323 Weight: 1.00 Name: BACU015224/1-471 Len: 475 Check: 8068 Weight: 1.00 // 1 50 ENSP00000336808/1-425 MNYARFITAA SAARNPSPIR TMTDILSRGP KSMISLAGGL PNPNMFPF-- ENSBTAP00000013637/1-425 MNYARFITAT SAARKPSTIR VMTEILSKAP KSVISLATGA PNPNTFPF-- bmy_18005T0/1-299 ---------- ---------- ---------- ---------- ---------- BACU015224/1-471 MDFSLLIFIF ELFQNNGK-- --TTMVKSLP PNRSNKYASI PSSRIQHFHQ 51 100 ENSP00000336808/1-425 -KTAVITVEN GKTIQFGEEM MKRALQ---- ---------- ---------- ENSBTAP00000013637/1-425 -KTAVITIEN GKPIQFNEQM MKRALQ---- ---------- ---------- bmy_18005T0/1-299 ---------- ---------- ---------- ---------- ---------- BACU015224/1-471 DRKQILTDWT SEPFNFCNQC TKHTFSSYCS FRVIDFYRKQ RDALLAAADK 101 150 ENSP00000336808/1-425 --------YS PSAG------ IPELLSWLKQ LQIKLHNPPT IHYPPSQGQM ENSBTAP00000013637/1-425 --------YS QSAG------ IPELLSWLKQ LQVKLHNPPT IHYAPTQGQM bmy_18005T0/1-299 ---------- ---------- ---------- ---------- ---------- BACU015224/1-471 WLSGLAEWHV PTAGMFLWVK IKGLHDVRKL IEEKAFKKEI FMLPGYKFYL 151 200 ENSP00000336808/1-425 DLCVTS---- -----GSQQG LCKVFEMIIN PGDNVLLDEP AYSGTLQSLH ENSBTAP00000013637/1-425 DICVTC---- -----GSQEG LCKVFEMIVN PGDNILVNEP IYSGTIHALQ bmy_18005T0/1-299 ---------- ---------- ------MIIN PGDNILVNEP IYSGTIHAVQ BACU015224/1-471 DSSAPCPYFR ASFSLASPEQ MDLVFEMIVN PGDNILVNEP IYSGTIHALQ 201 250 ENSP00000336808/1-425 PLGCNIINVA SDESGIVPDS LRDILSRWKP EDAKNPQKNT PKFLYTVPNG ENSBTAP00000013637/1-425 PLGCNMINVS SDEHGIIPDS LREILSKWKP EDSKNPKKNS PKFLYTVPNG bmy_18005T0/1-299 PLGCNMINIS SDEHGIIPDS LREILSRWKP EDSKNPEKNT PKFLYTVPNG BACU015224/1-471 PLGCNMINVS SDEHGIIPDS LREILSRWKP EDSKNPEKNT PKFLYTVPNG 251 300 ENSP00000336808/1-425 NNPTGNSLTS ERKKEIYELA RKYDFLIIED DPYYFLQFNK FRVPTFLSMD ENSBTAP00000013637/1-425 NNPSGNSLTA ERKREIYELA RKYDFLIIED DPYYFMQFNK PWAPTFLSMD bmy_18005T0/1-299 NNPAGNSLTT NRKKEIYELA RKYDFLIIED DPYYFMQFNK PWAPTFLSMD BACU015224/1-471 NNPAGNSLTT NRKKEIYELA RKYDFLIIED DPYYFMQFNK PWAPTFLSMD 301 350 ENSP00000336808/1-425 VDGRVIRADS FSKIISSGLR IGFLTGPKPL IERVILHIQV STLHPSTFNQ ENSBTAP00000013637/1-425 EDGRVIRADS FSKVLSSGLR IGFITGPKPL IERIVLHIQV STMHPSTFAQ bmy_18005T0/1-299 VDGRVIRADS FSKVLSSGLR IGFITGPKPL IERIVLHIQV STMHPSTFAQ BACU015224/1-471 VDGRVIRADS FSKVLSSGLR IGFITGPKPL IERIVLHTEV STMHTSTFTQ 351 400 ENSP00000336808/1-425 LMISQLLHEW GEEGFMAHVD RVIDFYSNQK DAILAAADKW LTGLAEWHVP ENSBTAP00000013637/1-425 LLVSQLLYQW GEEGFLGHVD RVIDFYRKQR DALMAAADKW LSGLAEWHVP bmy_18005T0/1-299 LLVSQLLYQW GEEGFLAHVD RVIDFYRKQR DALLAAADKW LSGLAEWHVP BACU015224/1-471 LLVSQLLHQW GEEGFLTHVE RIIDFYRKQR DALLAAADKW LSGLAEWHVP 401 450 ENSP00000336808/1-425 AAGMFLWIKV KGINDVKELI EEKAVKMGVL MLPGNAFYVD SSAPSPYLRA ENSBTAP00000013637/1-425 TAGMFLWVKI KGIHDVRKLI EEKAFKKEIF MLPGCGFYTD SSAPCPYFRA bmy_18005T0/1-299 TAGMFLWVKI KGLHDVRKLI EEKAFKKEIF MLPGYNFYLD SSAPCPYFRA BACU015224/1-471 TAGMFLWVKI KGLHDVRKLI EEKAFKKEIF MLPGYNFYLD SSAPCPYLRA 451 500 ENSP00000336808/1-425 SFSSASPEQM DVAFQVLAQL IKESL ENSBTAP00000013637/1-425 SFSSASPEQM DLAFQRLAQL IKESL bmy_18005T0/1-299 SFSLASPEQM DMAFQGLAQX IKESL BACU015224/1-471 SFSLASPEQM DMAFQGLAQF IKESL