KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:01 2014 Check: 00 .. Name: ENSP00000430236/1-492 Len: 500 Check: 9557 Weight: 1.00 Name: ENSBTAP00000013659/1-500 Len: 500 Check: 8795 Weight: 1.00 Name: bmy_09783T0/1-326 Len: 500 Check: 2906 Weight: 1.00 Name: BACU015782/1-415 Len: 500 Check: 5227 Weight: 1.00 Name: ENSTTRP00000001159/1-492 Len: 500 Check: 7465 Weight: 1.00 // 1 50 ENSP00000430236/1-492 -MAAGERSWC LCKLLRFFYS LFFPGLIVCG TLCVCLVIVL WGIRLLLQRK ENSBTAP00000013659/1-500 KMATAERGWC LCELLRFFYS LLFPGLFVCG TLCVCLLIIL WGIRLLLQRK bmy_09783T0/1-326 -MKFLTVTFC F--------- ---------- ---------- ---------- BACU015782/1-415 -MAAAERGWC LRELLR---- ---------- ---------- ---------- ENSTTRP00000001159/1-492 -MAVAARGWC LGELLRFFYS LFFPGLVVCG VLCVCLLSVL WGIRLLLQRK 51 100 ENSP00000430236/1-492 KKLVSTSKNG KNQMVIAFFH PYCNAGGGGE RVLWCALRAL QKKYPEAVYV ENSBTAP00000013659/1-500 KKSVSSSKTG KNQTVIAFFH PYCNAGGGGE RVLWCALRAL QKKYPEALYV bmy_09783T0/1-326 ---------- ---------- ---------- ---------- --RYPEAVYV BACU015782/1-415 ---------- ---------- ---------- ---------- ---YPEAVYV ENSTTRP00000001159/1-492 KKSGSASKTG KNQTVIAFFH PYCNAGGGGE RVLWCALRAL QKKYPEAVYV 101 150 ENSP00000430236/1-492 VYTGDVNVNG QQILEGAFRR FNIRLIHPVQ FVFLRKRYLV EDSLYPHFTL ENSBTAP00000013659/1-500 VYTGDADVSG QQILEGAFRR FNIRLTRPVK FVFLRKRYLV EDSLYPHFTL bmy_09783T0/1-326 VYTGDADVSG QQILEGAFRR FNIRLTCPVK FVLLRKRYLV EDSLYPHFTL BACU015782/1-415 VYTGDADVSG QQILEGAFRR FNIRLTCPVK FVLLRKRYLV EDSLYPHFTL ENSTTRP00000001159/1-492 VYTGDADVSG QQILEGAFRR FNIRLTCPVK FVLLRKRYLV EDSLYPHFTL 151 200 ENSP00000430236/1-492 LGQSLGSIFL GWEALMQCVP DVYIDSMGYA FTLPLFKYIG GCQVGSYVHY ENSBTAP00000013659/1-500 LGQSLGSIFL GWEALMQCVP DVYIDSMGYA FTLPLFKYLG GCRVGSYVHY bmy_09783T0/1-326 LGQSLGSIFL GWEALMQCVP DVYIDSMGYA FTLPLFKYLG GCXVGSYVHY BACU015782/1-415 LGQSLGSIFL GWEALMQCVP DVYIDSMGYA FTLPLFKYLG GCRVGSYVHY ENSTTRP00000001159/1-492 LGQSLGSIFL GWEALMQCVP DVYIDSMGYA FTLPLFRYLG RCRVGSYVHY 201 250 ENSP00000430236/1-492 PTISTDMLSV VKNQNIGFNN AAFITRNPFL SKVKLIYYYL FAFIYGLVGS ENSBTAP00000013659/1-500 PTISTDMLSV VKNQNVGFNN AAFITRNPFL SKVKLIYYYL FAFMYGLVGS bmy_09783T0/1-326 PTISTDMLSV VKNQNVGFNN AXFITRNPFL SKVKLIYYYL FAFIYGLAGS BACU015782/1-415 PTISTDMLSV VKNQNVGFNN AAFITRNPFL SKVKLIYYYL FAFIYGLAGS ENSTTRP00000001159/1-492 PTISTDMLSV VKNQNVRFNN AAFITRNPFL SKVKLIYYYL FAFLYGLAGS 251 300 ENSP00000430236/1-492 CSDVVMVNSS WTLNHILSLW KVGNCTNIVY PPCDVQTFLD IPLHEKKMTP ENSBTAP00000013659/1-500 CSDIVMVNSS WTLNHILSLW KVGNCTNIVY PPCDVQTFLD LPLHEEKATS bmy_09783T0/1-326 CSDVVMVNSS WTLNHILSLW KVGNCTNIVY PPCDVQTFLD IPLHKEKTTS BACU015782/1-415 CSDVVMVNSS WTLNHILSLW KVGNCTNIVY PPCDVQTFLD IPLHKEKTTS ENSTTRP00000001159/1-492 CSDVVMVNSS WTLNHILSLW KVGDCTNIVY PPCDVQTFLD IPLHKEKTTS 301 350 ENSP00000430236/1-492 GHLLVSVGQF RPEKNHPLQI RAFAKLLNKK MVESPPSLKL VLIGGCRNKD ENSBTAP00000013659/1-500 EHLLVSIGQF RPEKNHPLQI RAFAKLLNKK ESESLPPLKL VLIGGCRNQD bmy_09783T0/1-326 GHLLVSIGQF RPEKNHPLQI RAFAKLLNKK EAESLPPLKL VLIGGCRNQD BACU015782/1-415 GHLLVSIGQF RPEKNHPLQI RAFAKLLNKK EAESLPPLKL VLIGGCRNQD ENSTTRP00000001159/1-492 GHLLVSIGQF RPEKNHPLQI RAFAKLLNKK EAESLPPLKL VLIGGCRNQD 351 400 ENSP00000430236/1-492 DELRVNQLRR LSEDLGVQEY VEFKINIPFD ELKNYLSEAT IGLHTMWNEH ENSBTAP00000013659/1-500 DELRVNQLRR LAEDLGVQED VEFKINIPFD ELKNYLSEAT VGLHTMWNEH bmy_09783T0/1-326 DELRVNQLRR LSEDLGVQED VEFKINITFD ELKNYLSEAT VGLHTMWNEH BACU015782/1-415 DELRVNQLRR LSEDLGVQED VEFKINIPFD ELKNYLSEAT VGLHTMWNEH ENSTTRP00000001159/1-492 DELRVNQLRR LSEDLGVQED VEFKINIPFD ELKNYLSEAT VGLHTMWNEH 401 450 ENSP00000430236/1-492 FGIGVVECMA AGTIILAHNS GGPKLDIVVP HEGDITGFLA ESEEDYAETI ENSBTAP00000013659/1-500 FGIGIVECMA AGMIVLAHNS GGPKLDIVVP HHGERTGFLA ESEEGYAETM bmy_09783T0/1-326 FGIG------ ---------- ---------- ---------- ---------- BACU015782/1-415 FGIGIVECMA AGTIVLAHNS GGPKLDIVVP HQGERTGFLA ESEEDYAETM ENSTTRP00000001159/1-492 FGIGIVECMA AGTIVLAHNS GGPKLDIVVP HQGERTGFLA ESEEDYAETM 451 500 ENSP00000430236/1-492 AHILSMSAEK RLQIRKSARA SVSRFSDQEF EVTFLSSVEK LFK------- ENSBTAP00000013659/1-500 AHILSMSAEQ RLQIRNSARA SVSRFSDQEF EVAFLSSVER LFQKCHTCTN bmy_09783T0/1-326 ---------- ---------- --------EF VL-------- ---------- BACU015782/1-415 AHILSMSAEK RLQIRNNARA SVSRFSDQEF EVTFLMSVEK LFK------- ENSTTRP00000001159/1-492 AHILSMSAEK RLQIRNNARA SVSRFSDQEF EVTFLTSVEK LFQ-------