KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:04 2014 Check: 00 .. Name: ENSP00000263339/1-271 Len: 298 Check: 6353 Weight: 1.00 Name: ENSBTAP00000013665/1-268 Len: 298 Check: 6494 Weight: 1.00 Name: ENSTTRP00000010482/1-264 Len: 298 Check: 2563 Weight: 1.00 Name: bmy_09027T0/1-280 Len: 298 Check: 417 Weight: 1.00 Name: BACU017756/1-286 Len: 298 Check: 8960 Weight: 1.00 // 1 50 ENSP00000263339/1-271 ---------- ------MAKV PDMFEDLKNC YSENEEDSSS IDHLSLN--- ENSBTAP00000013665/1-268 ---------- ------MAKV PDLFEDLKNC YSENEDYSSE IDHLSLN--- ENSTTRP00000010482/1-264 ---------- ------MAKV PDLFEDLKNC YSENEEYSSE IDHLSLN--- bmy_09027T0/1-280 ---------- ------MAKV PDLFEDLKNC YSENEEYSSE IDHLSLNQPL BACU017756/1-286 MTSGPSASAI PEKEVKMAKV PDLFEDLKNC YSENEEYSSE IDHLSLN--- 51 100 ENSP00000263339/1-271 -------QKS FYHVSYGPLH EGCMDQSVSL SISETSKTSK LTFKESMVVV ENSBTAP00000013665/1-268 -------QKS FYDASYEPLR EDQMNKFMSL DTSETSKTSK LSFKENVVMV ENSTTRP00000010482/1-264 -------QKS FYDASYEPLH QDCIDKYMSL NTPETSKTSK LTFKENVMMV bmy_09027T0/1-280 SFHFPSSQKS FYDASYEPLH EDCMDKFISL NTSETSKTSK LTFKENVAMV BACU017756/1-286 -------QKS FYDASYEPLH EDCMDKFISL NTSETSKTSK LTFKENVAKV 101 150 ENSP00000263339/1-271 ATNGKVLKKR RLSLSQSITD DDLEAIANDS EEEIIKPRSA PFSFLSNVKY ENSBTAP00000013665/1-268 AASGKILKKR RLSLNQFITD DDLEAIANNT EEEIIKPRSA HYSFQSNVKY ENSTTRP00000010482/1-264 AANGKILKNR WLSLNQFLTD DDLEDIANDT EEEIIKPRSA HYSFQSNMKY bmy_09027T0/1-280 SANGKILKKR RLSLNQFITN DDLEDITKDT EEEIIKPRSA HSSFQSNMKY BACU017756/1-286 AANGKILKKR RLSLNQFITD DDLKDITNDT EEEIIKPRSA HYSFQSNMKY 151 200 ENSP00000263339/1-271 NFMRIIKYEF ILNDALNQSI IR-ANDQYLT AAALHNLDEA VKFDMGAYKS ENSBTAP00000013665/1-268 NFMRVIHQEC ILNDALNQSI IRDMSGPYLT ATTLNNLEEA VKFDMVAY-V ENSTTRP00000010482/1-264 NFIKLIQQQY ILNDALHQSI V--LVGQHLM AAALNNLDEA VEFDIAAY-T bmy_09027T0/1-280 NFVRVIRQQC ILNDALHQSI VQDSSGQYLT AAALNNPDEA VKFDMCAY-I BACU017756/1-286 NFMGVIKQQC ILNDALHQSI VQDSSGQYLM AAALNNPDEA VKFDMCAY-I 201 250 ENSP00000263339/1-271 SKDDAKITVI LRISKTQLYV TAQDEDQPVL LKEMPEIPKT ITGSETNLLF ENSBTAP00000013665/1-268 SEEDSQLPVT LRISKTQLFV SAQNEDEPVL LKEMPETPKI IK-DETNLLF ENSTTRP00000010482/1-264 SGDDTQLPVT LRISKTQLFV CAQNEGEPVL LKEMPETPQT IK-DETDLLF bmy_09027T0/1-280 PEEDHQCPVT LRISETLLFV CAQNEDEPIL LKEMPEIPKT IE-DETNLLF BACU017756/1-286 PEEDLQCPVT LRISKTLLFV CAQNEDEPVL LKEMPEIPKT IK-DETNLLF 251 300 ENSP00000263339/1-271 FWETHGTKNY FTSVAHPNLF IATKQDYWVC LAGGPPSITD FQILENQA ENSBTAP00000013665/1-268 FWEKHGSMDY FKSVAHPKLF IATKQEKLVH MASGPPSITD FQILEK-- ENSTTRP00000010482/1-264 LWSNHGSMQH FKSVAHPKLY FATKGEKLVH LARGPPSIID FQLL---- bmy_09027T0/1-280 FLEEHGTMCY FKSVANSELY LATKQEKLVH LARGLPSITD FQMSENQP BACU017756/1-286 FWEEHGTMCY FKSVANSKLY LATKQEKLVH LARGPPSITD FQMSENQP