KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:07 2014 Check: 00 .. Name: ENSP00000231198/1-298 Len: 322 Check: 8952 Weight: 1.00 Name: ENSBTAP00000013678/1-298 Len: 322 Check: 9388 Weight: 1.00 Name: bmy_20570T0/1-322 Len: 322 Check: 6888 Weight: 1.00 Name: BACU000782/1-322 Len: 322 Check: 6265 Weight: 1.00 Name: ENSTTRP00000006103/1-298 Len: 322 Check: 9446 Weight: 1.00 // 1 50 ENSP00000231198/1-298 MWGACKVKVH DSLATISITL RRYLRLGATM AKSKFEYVRD FEADDTCLAH ENSBTAP00000013678/1-298 MWAAGALKVR DCLAATSVTL RRCLKLGATM AKSKFEYVRD FEADDTCLPH bmy_20570T0/1-322 MWAAGAVKVR GCLAATSVPL RRCLKLGAAM AKSKFEYVRD FEADDTCLAH BACU000782/1-322 MWAAGAVKIR GCLAATSVPL RRCLKLGAAM AKSKFEYVRD FEADDTCLAH ENSTTRP00000006103/1-298 MWAAGAVKVS GCLAAFSVTL RRCLKLGAAM AKSKFEYVRD FEADDTCLAH 51 100 ENSP00000231198/1-298 CWVVVRLDGR NFHRFAEKHN FAKPNDSRAL QLMTKCAQTV MEELEDIVIA ENSBTAP00000013678/1-298 CWVVVRLDGR NFHRFAEKHS FIKPNDSRAL HLMTKCAQTV MNELEDIVIA bmy_20570T0/1-322 CWVVVRLDGR NFHRFAEKHN FTKPNDSRAL HLMTKCAQTV MEELEDIVIA BACU000782/1-322 CWVVVRLDGR NFHRFAEKHN FTKPNDSRAL HLMTKCAQTV MEELEDIVIA ENSTTRP00000006103/1-298 CWVVVRLDGR NFHRFAEKHN FAKPNDSRAL HLMTKCAQTV MEELEDIVIA 101 150 ENSP00000231198/1-298 YGQSDEYSFV FKRKTNWFKR RA-------- ---------- ------SKFM ENSBTAP00000013678/1-298 YGQSDEYSFV FKRKSNWFKR RA-------- ---------- ------SKFM bmy_20570T0/1-322 YGQSDEYSFV FKRKSNWFKR RARPCHGVEL ISCIFSFLAP PTVPFESKFM BACU000782/1-322 YGQSDEYSFV FKRKSNWFKR RARPCHGVEL ISCIFSFLAP PTVPFESKFM ENSTTRP00000006103/1-298 YGQSDEYSFV FKRKSNWFKR RA-------- ---------- ------SKFM 151 200 ENSP00000231198/1-298 THVASQFASS YVFYWRDYFE DQPLLYPPGF DGRVVVYPSN QTLKDYLSWR ENSBTAP00000013678/1-298 THVVSQFASS YVFYWRDYFE DQPLLYPPGF DGRVIVYPSN QTLKDYLSWR bmy_20570T0/1-322 THVVSQFASS YVFYWRDYFE DQPLRYPPGF DGRVVVYPSN QTLKDYLSWR BACU000782/1-322 THVVSQFASS YVFYWRDYFE DQPLRYPPGF DGRVVVYPSN QTLKDYLSWR ENSTTRP00000006103/1-298 THVVSQFASS YVFYWRDYFE DQPLLYPPGF DGRVVVYPSN QTLKDYLSWR 201 250 ENSP00000231198/1-298 QADCHINNLY NTVFWALIQQ SGLTPVQAQG RLQGTLAADK NEILFSEFNI ENSBTAP00000013678/1-298 QADCHINNLY NTVFWALVQQ SGLTPLQAQE RLQGTLAADK NEILFSEFNI bmy_20570T0/1-322 QADCHINNLY NTVFWALVQQ SGLTPIQAQE RLQGTLTADK NEILFSEFNI BACU000782/1-322 QADCHINNLY NTVFWALVQQ SGLTPIQAQE RLQGTLTADK NEILFSEFNI ENSTTRP00000006103/1-298 QADCHINNLY NTVFWALVQQ SGLTPIQAQE RLQGTLTADK NEILFSEFNI 251 300 ENSP00000231198/1-298 NYNNELPMYR KGTVLIWQKV DEVMTKEIKL PTEMEGKKMA VTRTRTKPVP ENSBTAP00000013678/1-298 NYNNEPLMYR KGTVLIWQKV EEITTKEVKL PAEMEGKKMA VTRTRTMVVP bmy_20570T0/1-322 NYNNEPLMYR KGTVLIWQKV DEVXTKEVRL PAEMEGKKMV VTRTRTKAVP BACU000782/1-322 NYNNEPLMYR KGTVLIWQKV DEVMTKEVRL PAEMEGKKMV VTRTRTKAVP ENSTTRP00000006103/1-298 NYNNEPLMYR KGTVLIWQKV DEVTTKEVRL PAEMEGRKMV VTRTRTKAVP 301 350 ENSP00000231198/1-298 LHCDIIGDAF WKEHPEILDE DS ENSBTAP00000013678/1-298 LHCNIIGDAF WKEHPEILDE DS bmy_20570T0/1-322 LHCDIIGDAF WKEHPEILDE DS BACU000782/1-322 LHCDIIGDAF WKEHPEILDE DS ENSTTRP00000006103/1-298 LHCDVIGDAF WKEHPEILHE DS