KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:08 2014 Check: 00 .. Name: ENSP00000286307/1-360 Len: 362 Check: 9222 Weight: 1.00 Name: ENSBTAP00000013683/1-305 Len: 362 Check: 2345 Weight: 1.00 Name: ENSTTRP00000006100/1-264 Len: 362 Check: 6943 Weight: 1.00 Name: bmy_20571T0/1-360 Len: 362 Check: 8786 Weight: 1.00 Name: BACU000783/1-342 Len: 362 Check: 319 Weight: 1.00 // 1 50 ENSP00000286307/1-360 MEERERGARS AGAGSPARPP SPRLDVSSDS FDPLLALYAP RLPPIPYPNA ENSBTAP00000013683/1-305 -------ARS ARAGSPARPP SPRLDVSSDS FDPLLALYAP HLPPIPYPNA ENSTTRP00000006100/1-264 ---------- ---------- ---------- ---------- ---------- bmy_20571T0/1-360 MEERERGARS ARAGSPARPP SPRLDVSSDS FDPLLALYAP RLPPIPYPNA BACU000783/1-342 MEERERGARS ARAGSPARPP SPRLDVSSDS FDPLLALYAP RLPPIPYPNA 51 100 ENSP00000286307/1-360 PCFNNVAEYE SFLRTGVRGG GRGRGRARGA AAGSGVP--A APGPSGRTRR ENSBTAP00000013683/1-305 PCFNNVAEYE SFLRTGLRSG --GRGRARGA AAGSGGPA-A AAGPSGRTRR ENSTTRP00000006100/1-264 ---------- ---------- ---------- ---------- ------RTRR bmy_20571T0/1-360 PCFNNLAEYE SFLRTGCRGG --GRGRARGA AAGSGGPATA AAGPLGRTRR BACU000783/1-342 PCFNNLAEYE SFLRTGCRGG --GRGRARGA AAGSGGPATA AAGPLGRTRR 101 150 ENSP00000286307/1-360 RPDAPAPDPE RIQRLRRLMV AKEEGDGAAG AGRRGPGRSR KAPRNVLTRM ENSBTAP00000013683/1-305 RPDAPAPDPE RIQRLRRLMV VKEEGDEAAD ARR------R EAPRNVLTRM ENSTTRP00000006100/1-264 R-DVPCPDPE RIQR-RRLHV VKGGRDGAAG ARRRGPGRSR KAPRNVLTRM bmy_20571T0/1-360 RPDIPAPDPE RIQRLRRLMV AKEEGDGAAG ARRRGPGRSR KAPRNVLTRM BACU000783/1-342 RPDIPAPDPE RIQRLRRLMV AKEEGDGAAG ARR------- ---------- 151 200 ENSP00000286307/1-360 PLHEGSPLGE LHRCIREGVK VNVHIRTFKG LRGVCTGFLV AFDKFWNMAL ENSBTAP00000013683/1-305 PLHEGSPLGE LHRCIREGVK VNVHIRTFKG LRGVCTGFLV AFDKFWNMAL ENSTTRP00000006100/1-264 PLHEGSPLGE LHRCIREGVK VNVHIRTFKG LRGVCTGFLV AFDKFWNMAL bmy_20571T0/1-360 PLHEGSPLGE LHRCIREGVK VNVHIRTFKG LRGVCTGFLV AFDKFWNMAL BACU000783/1-342 -LHEGSPLGE LHRCIREGVK VNVHIRTFKG LRGVCTGFLV AFDKFWNMAL 201 250 ENSP00000286307/1-360 TDVDETYRKP VLGKAYERDS SLTLTRLFDR LKLQDSSKKE ADSKSAVEDS ENSBTAP00000013683/1-305 TDVDETYRKP VLGKAYERDS SLTLTRLFDR LKLQDSSKKE TDSKHP---- ENSTTRP00000006100/1-264 TDVDETYRKP VLGKAYERDS SLTLTRLFDR LKLQDSSKKE TDSKSAVEDS bmy_20571T0/1-360 TDVDETYRKP VLGKAYERDS SLTLTRLFDR LKLQDSSKKE TDSKSAVEDS BACU000783/1-342 TDVDETYRKP VLGKAYERDS SLTLTRLFDR LKLQDSSKKE TDSKSAVEDS 251 300 ENSP00000286307/1-360 TLSRYSQTST WKLASVWGRA DTGRGSHKRS RSVPSSLQAS AREESRSELS ENSBTAP00000013683/1-305 ---------- ---------- ---------- -------HAS AREESRSELS ENSTTRP00000006100/1-264 TLSRYSQTST WKVASVWGRG DTDRGSRKRS RSVPSSLQAS AREESRSELS bmy_20571T0/1-360 TLSRYSQTST WKVASVWGRG DTDRGSRRRS RSVPSSLQAS AREESRSELS BACU000783/1-342 TLSRYSQTST WKVASVWGRG DTDRGSRRRS RSVPSSLQAS AREESRSELS 301 350 ENSP00000286307/1-360 GRTTRTDGSS VGGTFSRATT LSRGQSRKKK RKPKVDYQQV FTRHINQIFI ENSBTAP00000013683/1-305 GRTTRTEGSS AGGTFSRATT LSRGPSRKKK RKPKVDYQQV FTRHINQIFI ENSTTRP00000006100/1-264 GRTTQTEGSS AGGTFSRATT LSRGQPRKKK RKPKVDYQQV FTRHINQIFI bmy_20571T0/1-360 GRTTQTEGSS AGGTFSRATT LSRGQPRKKK RKPKVDYQQV FTRHINQIFI BACU000783/1-342 GRTTQTEGSS AGGTFSRATT LSRGQPRKKK RKPKVDYQQV FTRHINQIFI 351 400 ENSP00000286307/1-360 RGENVLLVHL AQ ENSBTAP00000013683/1-305 RGENVLLVHL AQ ENSTTRP00000006100/1-264 RGENVLLVHL AQ bmy_20571T0/1-360 RGENVLLVHL AQ BACU000783/1-342 RGENVLLVHL AQ