KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:08 2014 Check: 00 .. Name: BACU019573/1-371 Len: 434 Check: 3434 Weight: 1.00 Name: bmy_07984T0/1-428 Len: 434 Check: 7341 Weight: 1.00 Name: ENSTTRP00000008934/1-376 Len: 434 Check: 5842 Weight: 1.00 Name: ENSP00000339813/1-377 Len: 434 Check: 7677 Weight: 1.00 Name: ENSBTAP00000013685/1-377 Len: 434 Check: 6620 Weight: 1.00 // 1 50 BACU019573/1-371 MRLSVRRALL ATGFALALVL VVQLGQQVLE CRAVLG---- ---------- bmy_07984T0/1-428 MRLSVRRALL AAGFALALVL VVQLGQQVLE CRAVLGGPRP GPSMRLSVRR ENSTTRP00000008934/1-376 MRLSVRRALL AAGFALALVL AVQLGQQVLE CRVALGGPR- ---------- ENSP00000339813/1-377 MRLSVRRVLL AAGCALVLVL AVQLGQQVLE CRAVLAGLR- ---------- ENSBTAP00000013685/1-377 MRLSMRRALL AAGLALALVL AVHLGQRVLE CQAVLGGPR- ---------- 51 100 BACU019573/1-371 ---------- ---------- --------GP QQATWPEQED LVMGGTDHME bmy_07984T0/1-428 ALLAAGFALT LVLAVQLGQQ VLECRAALGP RRAMRPEQED LVMVGTDHVE ENSTTRP00000008934/1-376 ---------- ---------- --------GP RRAMRPEQED LVMVGTDHVE ENSP00000339813/1-377 ---------- ---------- --------SP RGAMRPEQEE LVMVGTNHVE ENSBTAP00000013685/1-377 ---------- ---------- --------GP RRTMRPEQED LMMVGADHVE 101 150 BACU019573/1-371 YLYGRAMLLI FVGSEPWSST TLTHVMLDTH PEVHCGEETH IIPRVLAM-Q bmy_07984T0/1-428 YRYGKAMPLI FVGGVPRSGT TLMRAMLDAH PEVRCGEETR IIPRVLAMRQ ENSTTRP00000008934/1-376 YRYGKAMPLI FVGGVPRSGT TLMRAMLDAH PEVRCGEETR IIPRVLAMRQ ENSP00000339813/1-377 YRYGKAMPLI FVGGVPRSGT TLMRAMLDAH PEVRCGEETR IIPRVLAMRQ ENSBTAP00000013685/1-377 YRYGKAMPLI FVGGVPRSGT TLMRAMLDAH PEVRCGEETR IIPRVLAMRQ 151 200 BACU019573/1-371 AWSKSGREKL RLDEAGVTGE VLDA---AFI LEVIAKHGEP ALVLCNKDPF bmy_07984T0/1-428 AWSKSGREKL RLDEAGVTDE VLDAAMQAFI LEVIAKHGEP ARILCNKDPF ENSTTRP00000008934/1-376 AWSKSGREKL RLDEAGVTDE VLDAAMQAFI LEVIAKHGEP ARVLCNKDPF ENSP00000339813/1-377 AWSKSGREKL RLDEAGVTDE VLDAAMQAFI LEVIAKHGEP ARVLCNKDPF ENSBTAP00000013685/1-377 AWSKSGREKL RLDEAGVTDE VLDAAMQAFI LEVIAKHGEP ARVLCNKDPF 201 250 BACU019573/1-371 TLKSSVYLLC LFPNSKSLLM VWDGRASVHS MITRKVTIAG FDLSSYRDCL bmy_07984T0/1-428 TLKSSVYLSR LFPNSKFLLM VRDGRASVHS MITRKVTIAG FDLSSYRDCL ENSTTRP00000008934/1-376 TIKSSVYRWN VFPNSKF-LM KWAVRNSVHS MITRKVTIAG FDLSSYRDCL ENSP00000339813/1-377 TLKSSVYLSR LFPNSKFLLM VRDGRASVHS MITRKVTIAG FDLSSYRDCL ENSBTAP00000013685/1-377 TLKSSVYLSR LFPNSKFLLM VRDGRASVHS MITRKVTIAG FDLSSYRDCL 251 300 BACU019573/1-371 TKGNKAIEVM YAQCMEVGKD KCLPVYYEQL VLHPQRCLKL ILNFLGITWS bmy_07984T0/1-428 AKWNKAIEVM YAQCMEVGKD KCLPVYYEQL VLHPRRSLKL ILDFLGIAWS ENSTTRP00000008934/1-376 AKWNKAIEVM YAQCMEVGED KCLPVYYEQL VLHPRRSLKL ILDFLGISWS ENSP00000339813/1-377 TKWNKAIEVM YAQCMEVGKE KCLPVYYEQL VLHPRRSLKL ILDFLGIAWS ENSBTAP00000013685/1-377 TKWNKAIEVM YAQCMEVGRD KCLPVYYEQL VLHPRRSLKV ILDFLGIAWS 301 350 BACU019573/1-371 DAVLHHEDLI GKPGGVSLSK IERSTDQVIK PMNLEALSKW TGHIPGDVLR bmy_07984T0/1-428 DAEMITYQFL ------QILQ IERSTDQVIK PVNLEALSKW TGHIPGDVLR ENSTTRP00000008934/1-376 DSVLHHEDLI GKPGGVSLSK IERSTDQVIK PVNLEALSKW TGHIPGDVLR ENSP00000339813/1-377 DAVLHHEDLI GKPGGVSLSK IERSTDQVIK PVNLEALSKW TGHIPGDVVR ENSBTAP00000013685/1-377 DAVLHHEDLI GKPGGVSLSK IERSTDQVIK PVNLEALSKW TGHIPGDVLR 351 400 BACU019573/1-371 DMAQIAPMLA RLVYDPYANP PNYDSPDSIV MNNTHWVLKG DD----KTPA bmy_07984T0/1-428 DMAQIAPMLA RLGYDPYANP PNYGNPDPIV INNTHRIFAN GFVARREETL ENSTTRP00000008934/1-376 DMAQIAPMLA RLGYDPYANP PNYGNPDPIV INNTHRVLKG DY----KTPA ENSP00000339813/1-377 DMAQIAPMLA QLGYDPYANP PNYGNPDPFV INNTQRVLKG DY----KTPA ENSBTAP00000013685/1-377 DMAQIAPMLA RLGYDPYANP PNYGNPDPIV INNTHRVVKS DH----KTPA 401 450 BACU019573/1-371 KLKG------ -YYLQVNQNS TSS------H LGSS bmy_07984T0/1-428 HLSGNRTSNP SILLAINRQN RTSPEECIAY VCKS ENSTTRP00000008934/1-376 NLKG------ --YLQVNQNS TSS------H LGSS ENSP00000339813/1-377 NLKG------ --YFQVNQNS TSS------H LGSS ENSBTAP00000013685/1-377 NLKG------ --YFQVNLNS TSS------H LGSS