KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:09 2014 Check: 00 .. Name: ENSP00000384387/1-425 Len: 457 Check: 4004 Weight: 1.00 Name: ENSBTAP00000013687/1-425 Len: 457 Check: 5154 Weight: 1.00 Name: bmy_14973T0/1-448 Len: 457 Check: 5058 Weight: 1.00 Name: BACU003291/1-406 Len: 457 Check: 982 Weight: 1.00 Name: ENSTTRP00000012593/1-425 Len: 457 Check: 3999 Weight: 1.00 // 1 50 ENSP00000384387/1-425 MEPSATPGAQ MGVPPGSREP SPVPPDYEDE FLRYLWRDYL YPKQYEWVLI ENSBTAP00000013687/1-425 MEPSATPGPQ MGVPTEGRER SPEPPDYEDE FLRYLWRDYL YPKQYEWVLI bmy_14973T0/1-448 MEPSATPGPQ MGVPTGSGEP SPVPPDYEDE FLRYLWRDYL YPKQYEWVLI BACU003291/1-406 ---------- MGVPTGSGEP SPVPPDYEDE FLRYLWRDYL YPKQYEWVLI ENSTTRP00000012593/1-425 MEPSATPGPQ MGVPTDSGEP SPVPPDYEDE FLRYLWRDYL YPKQYEWVLI 51 100 ENSP00000384387/1-425 AAYVAVFVVA LVGNTLVCLA VWRNHHMRTV TNYFIVNLSL ADVLVTAICL ENSBTAP00000013687/1-425 AAYVAVFFVA LVGNTLVCLA VWRNHHMRTV TNYFIVNLSL ADVLVTAICL bmy_14973T0/1-448 AAYVAVFLVA LVGNTLVCLA VWRNHHMRTV TNYFIVNLSL ADVLVTAICL BACU003291/1-406 AAYVAVFLVA LVGNTLVCLA VWRNHHMRTV TNYFIVNLSL ADVLVTAICL ENSTTRP00000012593/1-425 AAYVAVFLVA LLGNTLVCLA VWRNHHMRTV TNYFIVNLSL ADVLVTAICL 101 150 ENSP00000384387/1-425 PASLLVDITE SWLFGHALCK VIPYLQAVSV SVAVLT---- ---------- ENSBTAP00000013687/1-425 PASLLVDITE SWLFGHALCK VIPYLQAVSV SVAVLT---- ---------- bmy_14973T0/1-448 PASLLVDITE SWLFGHALCK VIPYLQVSFA WVPLMTPLSY QVQKPWPCIG BACU003291/1-406 PASLLVDITE SWLFGHALCK VIPYLQAVSV SVAVLT---- ---------- ENSTTRP00000012593/1-425 PASLLVDITE SWLFGHALCK VIPYLQAVSV SVAVLT---- ---------- 151 200 ENSP00000384387/1-425 ---------- --------LS FIALDRWYAI CHPLLFKSTA RRARGSILGI ENSBTAP00000013687/1-425 ---------- --------LS FIALDRWYAI CHPLLFKSTA RRARGSILGI bmy_14973T0/1-448 LSEPQTCLLD RTSWLSTLAA FIALDRWYAI CHPLLFKSTA RRARGSILGI BACU003291/1-406 ---------- --------LS FIALDRWYAI CHPLLFKSTA RRARGSILGI ENSTTRP00000012593/1-425 ---------- --------LS FIALDRWYAI CHPLLFKSTA RRARGSILGI 201 250 ENSP00000384387/1-425 WAVSLAIMVP QAAVMECSSV LPELANRTRL FSVCDERWAD DLYPKIYHSC ENSBTAP00000013687/1-425 WAVSLAVMVP QAAVMECSSV LPELANRTRL FSVCDERWAD DLYPKIYHSC bmy_14973T0/1-448 WAVSLAVMVP QAAVMECSSV LPELANRTRL FSVCDERWAD DLYPKIYHSC BACU003291/1-406 WAVSLAVMVP QAAVMECSSV LPELANRTRL FSVCDERWAD DLYPKIYHSC ENSTTRP00000012593/1-425 WAVSLAVMVP QAAVMECSSV LPELANRTRL FSVCDERWAD DLYPKIYHSC 251 300 ENSP00000384387/1-425 FFIVTYLAPL GLMAMAYFQI FRKLWGRQIP GTTSALVRNW KRPSDQLGDL ENSBTAP00000013687/1-425 FFIVTYLAPL GLMAMAYFQI FRKLWGRQIP GTTSALVRNW KRPSVQLEEQ bmy_14973T0/1-448 FFIVTYLAPL GLMAMAYFQI FRKLWGRQIP GTTSALVRNW KRPSDQLEDQ BACU003291/1-406 FFIVTYLAPL GLMAMAYFQI FRKLWGRQIP GTTSALVRNW KRPSDQLEDQ ENSTTRP00000012593/1-425 FFIVTYLAPL GLMAMAYFQI FRKLWGRQIP GTTSALVRNW KRPSDQLEDQ 301 350 ENSP00000384387/1-425 EQGLSGEPQP RARAFLAEVK QMRARRKTAK MLMVVLLVFA LCYLPISVLN ENSBTAP00000013687/1-425 GQGLGAEPQP RARAFLAEVK QMRARRKTAK MLMVVLLVFA LCYLPISVLN bmy_14973T0/1-448 GQGVGAEPPP RARAFLAEVK QMRARRKTAK MLMVVLLVFA LCYLPISVLN BACU003291/1-406 GQGVGAEAPP RARAFLAEVK QMRARRKTAK MLMVVLLVFA LCYLPISVLN ENSTTRP00000012593/1-425 GQGVGAEPPP RARAFLAEVK QMRARRKTAK MLMVVLLVFA LCYLPISVLN 351 400 ENSP00000384387/1-425 VLKRVFGMFR QASDREAVYA CFTFSHWLVY ANSAANPIIY NFLSGKFREQ ENSBTAP00000013687/1-425 VLKRVFGMFR QASDREAVYA CFTFSHWLVY ANSAANPIIY NFLSGKFREQ bmy_14973T0/1-448 VLK------- --SDREAVYA CFTFSHWLVY ANSAANPIIY NFLSGKFREQ BACU003291/1-406 VLK------- --SDREAVYA CFTFSHWLVY ANSAANPIIY NFLSGKFREQ ENSTTRP00000012593/1-425 VLKRVFGMFR QASDREAVYA CFTFSHWLVY ANSAANPIIY NFLSGKFREQ 401 450 ENSP00000384387/1-425 FKAAFSCCLP GLGPCGSLKA PSPRSSASHK SLSLQSRCSI SKISEHVVLT ENSBTAP00000013687/1-425 FKAAFSCCLP GLGPCVSLKV PSPRSSASHK SLSLQSRCSV SKASEHVLLT bmy_14973T0/1-448 FKAAFSCCLP GLGPCGSLKA PSPRSSASHK SLSLQSRCSV SKVSEHVVLT BACU003291/1-406 FKAAFSCCLP GLGPCGSLKA PSPRSSASHK SLSLQSRCSV SRVSEHVVLT ENSTTRP00000012593/1-425 FKAAFSCCLP GLGPCGSLKA PSPRSSASHK SLSLQSRCSV SKVSEHVVLT 451 500 ENSP00000384387/1-425 SVTTVLP ENSBTAP00000013687/1-425 SVTTVLP bmy_14973T0/1-448 SVTTVLP BACU003291/1-406 SVTTVLP ENSTTRP00000012593/1-425 SVTTVLP