KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:51:09 2014 Check: 00 .. Name: ENSP00000450114/1-325 Len: 440 Check: 7828 Weight: 1.00 Name: ENSBTAP00000013688/1-353 Len: 440 Check: 9113 Weight: 1.00 Name: bmy_17367T0/1-435 Len: 440 Check: 8165 Weight: 1.00 Name: ENSTTRP00000005408/1-325 Len: 440 Check: 4114 Weight: 1.00 // 1 50 ENSP00000450114/1-325 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013688/1-353 ---------- ---------- ---------- ---------- ----MSPERL bmy_17367T0/1-435 TATVDPHQAI RTPEGAAGSC WAVGEQATPS GPVQPRAAPA QQCGCLLSIF ENSTTRP00000005408/1-325 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000450114/1-325 ---------- -MQGRRELGG EP-------- -LSDLQEEAA SASLRV---- ENSBTAP00000013688/1-353 PIASVRARGT NMQDQRELGG AAGQGLPLCA FLSDLPEQGG GVSLRQVSKD bmy_17367T0/1-435 PSRLCGLGGT NMQGQRELGG APGHMPPLCA FLSDLAEQAG GVSFCRVSKD ENSTTRP00000005408/1-325 ---------- -MQGQRELGG AP-------- -LSDLAEQAG GVSFCRV--- 101 150 ENSP00000450114/1-325 -----APERL SDDSLEWRRT CPDLLLS--D GKASIS-MPR EGGSTCTARC ENSBTAP00000013688/1-353 SG---APGRQ SGDAVEWARL RCALPPP--D GEARTSGGSC EGLSTSTARG bmy_17367T0/1-435 SGAGSAPGRQ RGDAVEWASP RSLLPPPDGD GEARISGRSG EGLS-ASASG ENSTTRP00000005408/1-325 -----APGTQ GGDAVEWASP RSLLPPPDGD GEARISGRSG EGLS-ASARG 151 200 ENSP00000450114/1-325 PDPGEHSSTW GEFEGFRESS AKSGQFSQSL ELLEGPTEPQ PPRTTSAPKE ENSBTAP00000013688/1-353 PDPGEHSGAW GEFEVFQESS ASSEQFCQSF ELQERPAASQ PWRTASAQKQ bmy_17367T0/1-435 PDLGEHSGAW GEFEGFRESS ARSEQFSQSF ELPERPTEPQ PPRTISAQEE ENSTTRP00000005408/1-325 PDLGEHSGAW GDFEGFRESS ARSEQFSQSF ELPERPTEPQ PTRTISAQKE 201 250 ENSP00000450114/1-325 CSSHQPCQGG PWVTGTSAVP PSEPILSYEN ILKCAFQEIT VQQAAEDVST ENSBTAP00000013688/1-353 HGSSQPHQGG --VTGTGAIA ASELVVSCED VFRSAFQEVP VPQATEGIST bmy_17367T0/1-435 RGSRQSHQGG PGVTGTSAIT PSEPTVSYEK IFSFAFQEVP VPQATEDVST ENSTTRP00000005408/1-325 PGSHQSHQGG PGVTGTSAIT PSEPIVSYEK IFRFAFQEVP VPQATEDVST 251 300 ENSP00000450114/1-325 IDHFLEISSE EKPGVERVHK LCNESRKLWR ALQSIHTTST SQRLWSESRC ENSBTAP00000013688/1-353 LDHFLEARNE ESSGLESAQK LCSESRKLWR ALHNTGTMTI SRCTWSESRS bmy_17367T0/1-435 LDHFLETSNE EKLGLESVHK LRSESRKLWR ALQNTRTVMT SRCLWSESRC ENSTTRP00000005408/1-325 LDRFLETGNE EKLGLESVHK LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 301 350 ENSP00000450114/1-325 QENFFLVLGI DAAQK----- ---------- ---------- -------NLS ENSBTAP00000013688/1-353 RENFLPVLGV DAAQK----- ---------- ---------- -------SLS bmy_17367T0/1-435 RENFLLVLGI DAAQKGDVPE GPGEKGKTGE NDLLIFLPSA DTGLLPQSLS ENSTTRP00000005408/1-325 XXXXXXXXXX XXXXX----- ---------- ---------- -------XXX 351 400 ENSP00000450114/1-325 GGQGHIMEDC DLKEPEGLLT VSSFCLQHCK ALIQTKLSGP PGSKQGRLMT ENSBTAP00000013688/1-353 GSPGRTLGEP GLHEPEEL-- --GFHLQRCR ALIQTKLSGT PTGGQGSLIT bmy_17367T0/1-435 EGPGRTLGDP GLHEPEEL-- --GFRLHHCT ALIQTKLSGT PGGRQGSLIT ENSTTRP00000005408/1-325 XXXXXXXXXX XFHEPEEL-- --GFRMHRCR ALIQTKFPGT PGGRQGSLIT 401 450 ENSP00000450114/1-325 CSRFLKTPSC GGGQHITIPR -KRMFTPRKL KLTLFNSDVC ENSBTAP00000013688/1-353 YSLFLKTPIH GNGQYITTPR KKKTFGPRNL KLTLFNSDIY bmy_17367T0/1-435 YSLFLKTPIH GNGQYITIPR KKKIFTPRNL KMTLFNSDVC ENSTTRP00000005408/1-325 YSLFLKTPVH GSGQCITIPR NKKTFGPRNL KMALFNSGVR