KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:09 2014 Check: 00 .. Name: ENSP00000398105/1-264 Len: 272 Check: 7898 Weight: 1.00 Name: ENSBTAP00000013689/1-219 Len: 272 Check: 543 Weight: 1.00 Name: ENSTTRP00000010880/1-210 Len: 272 Check: 753 Weight: 1.00 Name: bmy_09172T0/1-269 Len: 272 Check: 3663 Weight: 1.00 Name: BACU008516/1-219 Len: 272 Check: 754 Weight: 1.00 // 1 50 ENSP00000398105/1-264 MGGAQLELPS GARPGVCVRR --------SF RAHAGDQPRR PPGPIPVPGT ENSBTAP00000013689/1-219 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010880/1-210 ---------- ---------- ---------- ---------- ---------- bmy_09172T0/1-269 AGGFKGDLGP GSAAGAVKRC QARWVRPWSF RARAGDQPRR PPGPVPVSGT BACU008516/1-219 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000398105/1-264 MKQESAAPNT PPTSQSPTPS AQFPRNDGDP QALWIFGYGS LVWRPDFAYS ENSBTAP00000013689/1-219 MKQEPAAQNS PPASP---PS SQPLSEDDDP QTLWIFGYGS LVWRPDFAYS ENSTTRP00000010880/1-210 MKQESAAQNT PPASP---PP SQHPQDDCDP QALWIFGYGS LVWRPDFAYS bmy_09172T0/1-269 MKQESAAQNT PPASP---PP SQHPQDDCDP QALWIFGYGS LVWRPDFTYS BACU008516/1-219 MKQESAAQNT PPASP---PP SQHPQDDCDP QALWIFGYGS LVWRPDFTYS 101 150 ENSP00000398105/1-264 DSRVGFVRGY SRRFWQGDTF HRGSDKMPGR VVTLLEDHEG CTWGVAYQVQ ENSBTAP00000013689/1-219 DSRVGFVRGY SRRFWQGDTF HRGSDKMPGR VVTLLEDHEG CTWGVAYQVQ ENSTTRP00000010880/1-210 DSRVGFVRGY SRRFWQGDTF HRGSDKMPGR VVTLLEDREG CTWGVAYQVQ bmy_09172T0/1-269 DSRVGFVRGY SRRFWQGDTF HRGSDKMPGR VVTLLEDREG CTWGVAYQVQ BACU008516/1-219 DSRVGFVRGY SRRFWQGDTF HRGSDKMPGR VVTLLEDREG CTWGVAYQVQ 151 200 ENSP00000398105/1-264 GEQVSKALKY LNVREAVLGG YDTKEVTFYP QDAPDQPLKA LAYVATPQNP ENSBTAP00000013689/1-219 GEQVSEALKY LNVREAVLGG YDTKEVTFYP QDTPDQPLKA LAYVATPQNP ENSTTRP00000010880/1-210 GEQVNEALKY LNVREAVLGS YDTKEVTFYP QDTPDQPLKA LAYVATPQNP bmy_09172T0/1-269 GEQVNEALKY LNVREAVLGS YDTKEVTFYP QDTPDQPLKA LAYVATPQNP BACU008516/1-219 GEQVNEALKY LNVREAVLGS YDTKEVTFYP QDTPDQPLKA LAYVATPQNP 201 250 ENSP00000398105/1-264 GYLGPAPEEA IATQILACRG FSGHNLEYLL RLADFMQLCG PQAQDEHLAA ENSBTAP00000013689/1-219 GYLGPAPEEA IATQILACRG FSGHNLEYLL RLADFMQLCG PQAQDEHLAA ENSTTRP00000010880/1-210 GYLGPAPEEA IATQILVCRG FSGHNLEYLL RLTDFMQLCG PQAQDEHLAA bmy_09172T0/1-269 GYLGPAPEEA IATQILACRG FSGHNLEYLL RLADFMQLCG PQAQDEHLAA BACU008516/1-219 GYLGPAPEEA IATQILACRG FSGHNLEYLL RLADFMQLCG PQAQDEHLAA 251 300 ENSP00000398105/1-264 IVDAVGTMLP CFCPTEQALA LV ENSBTAP00000013689/1-219 IVDAVGTMLP CFCPTEQALA LV ENSTTRP00000010880/1-210 I--DASTMLP CFCPT----- -- bmy_09172T0/1-269 IVDAVGTMLP CFCPTEQALA LV BACU008516/1-219 IVDAVGTMLP CFCPTEQALA LV