KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:10 2014 Check: 00 .. Name: ENSBTAP00000013692/1-858 Len: 860 Check: 5365 Weight: 1.00 Name: ENSP00000355621/1-860 Len: 860 Check: 14 Weight: 1.00 Name: ENSTTRP00000003741/1-771 Len: 860 Check: 3578 Weight: 1.00 Name: bmy_17334T0/1-438 Len: 860 Check: 5626 Weight: 1.00 Name: BACU005023/1-692 Len: 860 Check: 9437 Weight: 1.00 // 1 50 ENSBTAP00000013692/1-858 MAPAGCCCGG C-WGGAVAAA DAARSVLVLL LLGVLSAGPG PGALATEHYS ENSP00000355621/1-860 MAPAGCCCCC CFWGGAVAAA GAARRVLLLL LLGVLSAGLR PGALATEHYS ENSTTRP00000003741/1-771 ---------- ---------- ---------- ---------- ---------- bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000013692/1-858 PLSLLKQELQ HRQQQEAPA- GGGCSPQSGD WGDQYSAECG ESSFLNFHDS ENSP00000355621/1-860 PLSLLKQELQ HRQQQEAPAG GGGCSPQSGD WGDQYSAECG ESSFLNFHDS ENSTTRP00000003741/1-771 ---------- ---------- ---------- ---------G ESSFLNFHDS bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000013692/1-858 DCEPKGSPPC DSLLSLNTEK ILSQAKSIAE QKRFPFATDN DSTNEELAIA ENSP00000355621/1-860 DCEPKGSSPC DSLLSLNTEK ILSQAKSIAE QKRFPFATDN DSTNEELAIA ENSTTRP00000003741/1-771 DCEPKGPPPC DSLLSLNTEK ILSQAKSIAE QKRFPFATDN DSTNEELAIA bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000013692/1-858 YVLIGSGLYD EAIRHFSTML QEEPDLVSAI YGRGIAYGKK GLHDIKNAEL ENSP00000355621/1-860 YVLIGSGLYD EAIRHFSTML QEEPDLVSAI YGRGIAYGKK GLHDIKNAEL ENSTTRP00000003741/1-771 YVLIGSGLYD EAIRHFSTML QEEPDLVSAI YGRGIAYGKK GLHDIKNAEL bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 ---------- --------ML QEEPDLVSAI YGRGIAYGKK GLHDIKNAEL 201 250 ENSBTAP00000013692/1-858 ALFELSRVIT LEPDRPEVFE QRAEILSPLG RINEAVNDLT KAIQLQPSAR ENSP00000355621/1-860 ALFELSRVIT LEPDRPEVFE QRAEILSPLG RINEAVNDLT KAIQLQPSAR ENSTTRP00000003741/1-771 SLFELSRVIT LEPDRPEVFE QRAEILSPLG RINEAVSDLT KAIQLQPSAR bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 ALFELSRVIT LEPDRPEVFE QRAEILSPLG RINEAVNDLT KAIQLQPSAR 251 300 ENSBTAP00000013692/1-858 LYRHRGTLYF ISEDYATAHE DFQQSLELNK NQPIAMLYKG LTFFHRGLLK ENSP00000355621/1-860 LYRHRGTLYF ISEDYATAHE DFQQSLELNK NQPIAMLYKG LTFFHRGLLK ENSTTRP00000003741/1-771 LYRHRGTLYF ISEDYATAHE DFQQSLELNK NQPIAMLYKG LTFFHRGLLK bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 LYRHRGTLYF ISEDYATAHE DFQQSLELNK NQPIAMLYKG LTFFHRGLLK 301 350 ENSBTAP00000013692/1-858 EAIESFKEAL KQKVDFIDAY KSLGQAYREL GNFEAATESF QKALLLNQNH ENSP00000355621/1-860 EAIESFKEAL KQKVDFIDAY KSLGQAYREL GNFEAATESF QKALLLNQNH ENSTTRP00000003741/1-771 EAIESFKEAL KQKVDFIDAY KSLGQAYREL GNFEAATESF QKALLLNQNH bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 EAIESFKEAL KQKVDFIDAY KSLGQAYREL GNFEAATESF QKALLLNQNH 351 400 ENSBTAP00000013692/1-858 VQTLQLRGMM LYHHGSLHEA LKNFKRCLQL EPYNEVCQYM KGLSHVAMGQ ENSP00000355621/1-860 VQTLQLRGMM LYHHGSLQEA LKNFKRCLQL EPYNEVCQYM KGLSHVAMGQ ENSTTRP00000003741/1-771 VQTLQLRGMM LYHHGSLQEA LKNFKRCLQL EPYNEVCQYM KGLSHVAMGQ bmy_17334T0/1-438 --------MM LYHHGSLQEA LKNFKRCLQL EPYNEVCQYM KGLSHVAMGQ BACU005023/1-692 VQTLQLRGMM LYHHGSLQEA LKNFKRCLQL EPYNEVCQYM KGLSHVAMGQ 401 450 ENSBTAP00000013692/1-858 FYEGIKAQTK VMLNDPLPGQ KASPEYLKVK YLREYSRYLH AHLDTPLTEY ENSP00000355621/1-860 FYEGIKAQTK VMLNDPLPGQ KASPEYLKVK YLREYSRYLH AHLDTPLTEY ENSTTRP00000003741/1-771 FYEGIKAQTK VMLNDPLPGQ KASPEYLKVK YLREYSRYLH AHLDTPLTEY bmy_17334T0/1-438 FYEGIKAQTK VMLNDPLPGQ KASPEYLKVK YLREYSRYLH AHLDTPLTEY BACU005023/1-692 FYEGIKAQTK VMLNDPLPGQ KASPEYLKVK YLREYSRYLH AHLDTPLTEY 451 500 ENSBTAP00000013692/1-858 NIDVDLPGSF KDHWAKNLPF LIEDYEEQPG LQPHIKDVLH QNFESYKPEV ENSP00000355621/1-860 NIDVDLPGSF KDHWAKNLPF LIEDYEEQPG LQPHIKDVLH QNFESYKPEV ENSTTRP00000003741/1-771 NIDADLPGSF KDHWAKNLPF LIEDYEEQPG LQPHIKDVLH QNFESYKPEV bmy_17334T0/1-438 NIDADLPGSF KDHWAKNLPF LIEDYEEQPG LQPHIKDVLH QNFESYKPEV BACU005023/1-692 NIDADLPGSF KDHWAKNLPF LIEDYEEQPG LQPHIKDVLH QNFESYKPEV 501 550 ENSBTAP00000013692/1-858 QELICVADRL GSLMQYETPG FLPNKRIHRA MGLAALEVMQ AVQRTWTNSK ENSP00000355621/1-860 QELICVADRL GSLMQYETPG FLPNKRIHRA MGLAALEVMQ AVQRTWTNSK ENSTTRP00000003741/1-771 QELICVADRL GSLMQYETPG FLPNKRIHRA MGLAALEVMQ AVQRTWTSSK bmy_17334T0/1-438 QELICVADRL GSLMQYETPG FLPNKRIHRA MGLAALEVMQ AVQRTWTSSK BACU005023/1-692 QELICVADRL GSLMQYETPG FLPNKRIHRA MGLAALEVMQ AVQRTWTSSK 551 600 ENSBTAP00000013692/1-858 VRMNGKTRLM QWRDMFDIAV KWRRIADPDQ PVLWLDQMPA QSLSRGFNNH ENSP00000355621/1-860 VRMNGKTRLM QWRDMFDIAV KWRRIADPDQ PVLWLDQMPA RSLSRGFNNH ENSTTRP00000003741/1-771 VRMNGKTRLM QWRDMFDIAV KWRRIADPDQ PVLWLDQMPA RSLSRGFNNH bmy_17334T0/1-438 VRMNGKTRLM QWRDMFDIAV KWRRIADPDQ PVLWLDQMPA RSLSRGFNNH BACU005023/1-692 VRMNGKTRLM QWRDMFDIAV KWRRIADPDQ PVLWLDQMPA RSLSRGFNNH 601 650 ENSBTAP00000013692/1-858 INLIRGQVIN MRYLEYFEKI LHFIKDRILV YHGANNPKGL LEVREALEKV ENSP00000355621/1-860 INLIRGQVIN MRYLEYFEKI LHFIKDRILV YHGANNPKGL LEVREALEKV ENSTTRP00000003741/1-771 INLIRGQVIN MRYLEYFEKI LHFIKDRILV YHGANNPKGL LEVREALEKV bmy_17334T0/1-438 VNLIRGQVIN MRYLEYFEKI LHFIKDRILV YHGANNPKGL LEVREALEKV BACU005023/1-692 VNLIRGQVIN MRYLEYFEKI LHFIKDRILV YHGANNPKGL LEVREALEKV 651 700 ENSBTAP00000013692/1-858 HKVEDLLPIM KQFNTKTKDG FTVNTKVPSL KDQGKEYDGF TITITGDKVG ENSP00000355621/1-860 HKVEDLLPIM KQFNTKTKDG FTVNTKVPSL KDQGKEYDGF TITITGDKVG ENSTTRP00000003741/1-771 HKVEDLLPIM KQFNTKTKDG FTVNTKVPSL KDQGKEYDGF TITITGDKVG bmy_17334T0/1-438 HKVEDLLPIM KQFNTKTKDG FTVNTKVPSL KDQGKEYDGF TITITGDKVG BACU005023/1-692 HKVEDLLPIM KQFNTKTKDG FTVNTKVPSL KDQGKEYDGF TITITGDKVG 701 750 ENSBTAP00000013692/1-858 NILFSVETQT TEERTQLYHA EIDALYKDLT AKGKVLILSS EFGEADAVCN ENSP00000355621/1-860 NILFSVETQT TEERTQLYHA EIDALYKDLT AKGKVLILSS EFGEADAVCN ENSTTRP00000003741/1-771 NILFSVETQT TEERTQLYHA EIDALYKDLT AKGKVLILSS EFGETDAVGN bmy_17334T0/1-438 NILFSVETQT TEERTQLYHA EIDALYKDLT AKGKVLILSS EFGETDAVGN BACU005023/1-692 NILFSVETQT TEERTQLYHA EIDALYKDLT AKGKVLILSS EFGETDAVGN 751 800 ENSBTAP00000013692/1-858 LILSLVYYFY NLMPLSRGSS VIAYSVIVGA LMASGKEVAG KIPKGKLVDF ENSP00000355621/1-860 LILSLVYYFY NLMPLSRGSS VIAYSVIVGA LMASGKEVAG KIPKGKLVDF ENSTTRP00000003741/1-771 LILSLVYYFY NLMPLSRGSS VIAYSVIVGA LMASGKEVAG KIPKGKLVDF bmy_17334T0/1-438 LILSLVYYFY NLMPLSRGSS VIAYSVIVGA LMASGKEVAG KIPKGK---- BACU005023/1-692 LILSLVYYFY NLMPLSRGSS VIAYSVIVGA LMASGKEVAG KIPKGKLVDF 801 850 ENSBTAP00000013692/1-858 EAMTAPGSEA FSKIAKSWMN LKSISPSYKT LPSVSETFPT LRSMIEVLNT ENSP00000355621/1-860 EAMTAPGSEA FSKVAKSWMN LKSISPSYKT LPSVSETFPT LRSMIEVLNT ENSTTRP00000003741/1-771 EAMTAPGSEA FSKIAKSWMN LKSISPSYKT LPSVSETFAT LRSMIEVLNT bmy_17334T0/1-438 ---------- ---------- ---------- ---------- ---------- BACU005023/1-692 EAMTAPGSEA FSKIAKSWMN LKSISPSYKT LPSVSETFPT LRSMIEVLNT 851 900 ENSBTAP00000013692/1-858 DSSPRCLKKL ENSP00000355621/1-860 DSSPRCLKKL ENSTTRP00000003741/1-771 DSSPRCLKKL bmy_17334T0/1-438 ---------- BACU005023/1-692 DSSPRCLKKL