KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:51:14 2014 Check: 00 .. Name: BACU012697/1-566 Len: 722 Check: 9766 Weight: 1.00 Name: bmy_03180T0/1-456 Len: 722 Check: 7433 Weight: 1.00 Name: ENSTTRP00000012211/1-299 Len: 722 Check: 8331 Weight: 1.00 Name: ENSBTAP00000013707/1-300 Len: 722 Check: 1172 Weight: 1.00 // 1 50 BACU012697/1-566 ---------- ---------- ---------- ---------- ---------- bmy_03180T0/1-456 RLRGPGRSGG WVGVSTVSAC AGQRARVPLP PPRSLSPSPL TSYPTQLPSS ENSTTRP00000012211/1-299 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013707/1-300 ---------- ---------- ---------- ---------- ---------- 51 100 BACU012697/1-566 ---------- ---------- ---------- -MILLEVNNR IIEETLALKF bmy_03180T0/1-456 GGSRAAPSVL SSLTHPHPPL FLLPLPGAAA AMILLEVNNR IIEETLALKF ENSTTRP00000012211/1-299 ---------- ---------- ---------- -MILLEVNNR IIEETLALKF ENSBTAP00000013707/1-300 ---------- ---------- ---------- -MILLEVNNR IIEETLALKF 101 150 BACU012697/1-566 ENAAAGNKPE AV-------- ---------- ---------- ---------- bmy_03180T0/1-456 ENAAAGTRRE PIWDWVGRSF QEFPGLEEEK KMQAQITTSL LASHPPPSSK ENSTTRP00000012211/1-299 ENAAAGNKPE AV-------- ---------- ---------- ---------- ENSBTAP00000013707/1-300 ENAAAGNKPE AV-------- ---------- ---------- ---------- 151 200 BACU012697/1-566 ---------- ---------- ---------- -----EVTF- -ADFDGVLYH bmy_03180T0/1-456 GAGGKTEGRP SVAAGKPDDL SSLPSLSPAV RDTGHFVTFL KQNFDGVLYH ENSTTRP00000012211/1-299 ---------- ---------- ---------- -----EVTF- -ADFDGVLYH ENSBTAP00000013707/1-300 ---------- ---------- ---------- -----EVTF- -ADFDGVLYH 201 250 BACU012697/1-566 ISNPNGDKTK VMVSISLKFY KELQAHGADE LLKRVYGSFL VNPESGYNVS bmy_03180T0/1-456 ISNPNGDKTK VMVSISLKFY KELQAHGADE LLKRVYGSFL VNPESGYNVS ENSTTRP00000012211/1-299 ISNPNGDKTK VMVSISLKFY KELQAHGADE LLKRVYGSFL VNPESGYNVS ENSBTAP00000013707/1-300 ISNPNGDKTK VMVSISLKFY KELQAHGADE LLKRVYGSYL VNPESGYNVS 251 300 BACU012697/1-566 LLYDLENLPA SKDSIVHQAG MLKRNCFASV FEKYFQFQEE GKEGENRAVI bmy_03180T0/1-456 LLYDLENLPA SKDSIVHQAG MLKRNCFASV FEKYFQFQEE GKEGENRAVI ENSTTRP00000012211/1-299 LLYDLENLPA SKDSIVHQAG MLKRNCFASV FEKYFQ-QEE GKEGENRAVI ENSBTAP00000013707/1-300 LLYDLENLPA SKDSIVHQAG MLKRNCFASV FEKYFQFQEE GKEGENRAVI 301 350 BACU012697/1-566 HYRDDETMYV ESKKDRVTVV FSTVFKDDDD VVIGKVFMQE FKEGRRASHT bmy_03180T0/1-456 HYRDDETMYV ESKKDRVTVV FSTVFKDDDD VVIGKVFMQE FKEGRRASHT ENSTTRP00000012211/1-299 HYRDDETMYV ESKKDRVTVV FSTVFKDDDD VVIGKVFMQE FKEGRRASHT ENSBTAP00000013707/1-300 HYRDDETMYV ESKKDRVTVV FSTVFKDDDD VVIGKVFMQE FKEGRRASHT 351 400 BACU012697/1-566 APQVLFSHRE PPLELKDTDA AVGDNIGYIT FVLFPRHTNA SARDNTINLI bmy_03180T0/1-456 APQVLFSHRE PPLELKDTDA AVGDNIGYIT FVLFPRHTNA SARDNTINLI ENSTTRP00000012211/1-299 APQVLFSHRE PPLELKDTDA AVGDNIGYIT FVLFPRHTNA SARDNTINLI ENSBTAP00000013707/1-300 APQVLFSHRE PPLELKDTDA AVGDNIGYIT FVLFPRHTNA SARDNTINLI 401 450 BACU012697/1-566 HTFRDYLHYH IKCSKACPLL LQASPVPRPK MTPNSTREMP SPIPAGALGL bmy_03180T0/1-456 HTFRDYLHYH IKCSKA---- ---------- ---------- ---------- ENSTTRP00000012211/1-299 HTFRDYLHYH IKCSKA---- ---------- ---------- ---------- ENSBTAP00000013707/1-300 HTFRDYLHYH IKCSKA---- ---------- ---------- ---------- 451 500 BACU012697/1-566 YLALASLIVA ANMFLALGIA RDHRLRSPPA GCFFLSLLLA GLLTGLALPA bmy_03180T0/1-456 YI-------- ---------- -HTRMRAKTS D--------- ---------- ENSTTRP00000012211/1-299 YI-------- ---------- -HTRMRAKTS D--------- ---------- ENSBTAP00000013707/1-300 YI-------- ---------- -HTRMRAKTS D--------- ---------- 501 550 BACU012697/1-566 LPGLWNQSRR GYWSCLFLYL APNFSFLSLL ANLLLVHGER YMAVLRPLRP bmy_03180T0/1-456 ---------- ---------- ---------- ---------- FLKVLNRARP ENSTTRP00000012211/1-299 ---------- ---------- ---------- ---------- FLKVLNRARP ENSBTAP00000013707/1-300 ---------- ---------- ---------- ---------- FLKVLNRARP 551 600 BACU012697/1-566 RGSTRMALLL TWAGPLLFAS LPALGWNHWA PGANCSSQAV FPAPYLHLQV bmy_03180T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012211/1-299 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013707/1-300 ---------- ---------- ---------- ---------- ---------- 601 650 BACU012697/1-566 YGLLLPAVGA AALLSARAQA GATLLFGLCW GPYVATLLLS VLAYEQRPPL bmy_03180T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012211/1-299 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000013707/1-300 ---------- ---------- ---------- ---------- ---------- 651 700 BACU012697/1-566 GPGTLLSLIS LGSASAAAVP VAMGLGDQRY TAPWRAAAQR WLQVLRGSPR bmy_03180T0/1-456 ---------- ---------- ---------- -----DAEKK EMKTITGKTF ENSTTRP00000012211/1-299 ---------- ---------- ---------- -----DAEKK EMKTITGKTF ENSBTAP00000013707/1-300 ---------- ---------- ---------- -----DAEKK EMKTITGKTF 701 750 BACU012697/1-566 GSPGPSPAYH TSNQSSMDLD LN bmy_03180T0/1-456 SSR------- ---------- -- ENSTTRP00000012211/1-299 SSR------- ---------- -- ENSBTAP00000013707/1-300 SSR------- ---------- --