KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:51:17 2014 Check: 00 .. Name: ENSP00000264968/1-535 Len: 535 Check: 4633 Weight: 1.00 Name: ENSBTAP00000013715/1-535 Len: 535 Check: 6079 Weight: 1.00 Name: ENSTTRP00000005712/1-534 Len: 535 Check: 1475 Weight: 1.00 Name: bmy_20677T0/1-290 Len: 535 Check: 1759 Weight: 1.00 Name: BACU017697/1-535 Len: 535 Check: 6787 Weight: 1.00 // 1 50 ENSP00000264968/1-535 MRLRNGTVAT ALAFITSFLT LSWYTTWQNG KEKLIAYQRE FLALKERLRI ENSBTAP00000013715/1-535 MRLRNGTVAT VLAFITSFLT LSWYTTWQNG KEKVIAYQRE FLALKERLRI ENSTTRP00000005712/1-534 MRLRNGTVAT VLAFITSFLT LSWYTTWQNG KEKLIAYQRE FLALKERLRI bmy_20677T0/1-290 ---------- ---------- ---------- ---------- ---------- BACU017697/1-535 MRLRNGTVAT VLAFITSFLT LSWYTTWQNG KEKLIAYQRE FLALKERLRI 51 100 ENSP00000264968/1-535 AEHRISQRSS ELNTIVQQFK RVGAETNGSK DALNKFSDNT LKLLKELTSK ENSBTAP00000013715/1-535 AEHRISQRSS ELSAIVQQFK RVEAETNRSK DPVNKFSDDT LKILKELTSK ENSTTRP00000005712/1-534 AEHRISQRSS ELNAIVQQFK RVGAETNRSK DAVNKFSDGT LKLLRELTSK bmy_20677T0/1-290 ---------- ---------- ---------- ---------- ---------- BACU017697/1-535 AEHRISQRSS ELNAIVQQFK RVGAETNRSK DTVNKFSDGT LKLLRELTSK 101 150 ENSP00000264968/1-535 KSLQVPSIYY HLPHLLKNEG SLQPAVQIGN GRTGVSIVMG IPTVKREVKS ENSBTAP00000013715/1-535 KSLQVPSIYY HLPHLLQNEG SLQPAVQIGN GRTGVSIVMG IPTVKREVKS ENSTTRP00000005712/1-534 KSLQVPSIYY HLPHLLQNEG SLQPVVQIGN GRTGXXXXXX XXXXXXXXXX bmy_20677T0/1-290 ---------- ---------- ---------- ---------- ---------- BACU017697/1-535 KSLQVPSIYY HLPHLLQNEG SLQPVVQIGN GRTGVSIVMG VPTVKREVKS 151 200 ENSP00000264968/1-535 YLIETLHSLI DNLYPEEKLD CVIVVFIGET DIDYVHGVVA NLEKEFSKEI ENSBTAP00000013715/1-535 YLIETLHSLI DNLYPEEKLD CVIVVFIGET DTDYVNGVVA NLEKEFSKEI ENSTTRP00000005712/1-534 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT DIDYVNGVVA NLEKEFSKEI bmy_20677T0/1-290 ---------- ---------- ---------- ---------- ---------- BACU017697/1-535 YLIETLHSLI DNLYPEEKLD CVIVVFIGET DIDYVNGVVA NLEKEFSKEI 201 250 ENSP00000264968/1-535 SSGLVEVISP PESYYPDLTN LKETFGDSKE RVRWRTKQNL DYCFLMMYAQ ENSBTAP00000013715/1-535 SSGLVEIISP PESYYPDLTN LKETFGDSKE RVRWRTKQNL DYCFLMMYAQ ENSTTRP00000005712/1-534 SSGLVEIISP PESYYPDLTN LKETFGDSKE RIRWRTKQNL DYCFLMMYAQ bmy_20677T0/1-290 ---------- ---------- ---------- ---------- -----MMYAQ BACU017697/1-535 SSGLVEIISP PESYYPDLTN LKETFGDSKE RIRWRTKQNL DYCFLMMYAQ 251 300 ENSP00000264968/1-535 EKGIYYIQLE DDIIVKQNYF NTIKNFALQL SSEEWMILEF SQLGFIGKMF ENSBTAP00000013715/1-535 EKGTYYIQLE DDIIVKQNYF NTIKNFALQL SSEEWMILEF SQLGFIGKMF ENSTTRP00000005712/1-534 EKGTYYIQLE DDIIVKQNYF NTIKNFALQL SSEEWMILEF SQLGFIGKMF bmy_20677T0/1-290 EKGTYYIQLE DDIIVKQNYF NTIKNFALQL SSEEWMILEF SQLGFIGKMF BACU017697/1-535 EKGTYYIQLE DDIIVKQNYF NTIKNFALQL SSEEWMILEF SQLGFIGKMF 301 350 ENSP00000264968/1-535 QAPDLTLIVE FIFMFYKEKP IDWLLDHILW VKVCNPEKDA KHCDRQKANL ENSBTAP00000013715/1-535 QAPDLTLIVE FIFMFYKEKP IDWLLDHILW VKVCNPEKDA KHCDRQKANL ENSTTRP00000005712/1-534 QAPDLTLIVE FIFMFYKEKP IDWLLDHILW VKVCNPEKDA KHCDRQKANL bmy_20677T0/1-290 QAPDLTLIVE FIFMFYKEKP IDWLLDHILW VKVCNPEKDA KHCDRQKANL BACU017697/1-535 QAPDLTLIVE FIFMFYKEKP IDWLLDHILW VKVCNPEKDA KHCDRQKANL 351 400 ENSP00000264968/1-535 RIRFRPSLFQ HVGLHSSLSG KIQKLTDKDY MKPLLLKIHV NPPAEVSTSL ENSBTAP00000013715/1-535 RIRFRPSLFQ HVGLHSSLTG KIQKLTDKDY MKPLLLKIHV NPPAEVSTSL ENSTTRP00000005712/1-534 RIRFRPSLFQ HVGLHSSLTG KIQKLTDKDY MKPLLLKIHV NPPAEVSTSL bmy_20677T0/1-290 RIRFRPSLFQ HVGLHSSLTG KIQKLTDKDY MKPLLLKIHV NPPAEVSTSL BACU017697/1-535 RIRFRPSLFQ HVGLHSSLTG KIQKLTDKDY MKPLLLKIHV NPPAEVSTSL 401 450 ENSP00000264968/1-535 KVYQGHTLEK TYMGEDFFWA ITPIAGDYIL FKFDKPVNVE SYLFHSGNQE ENSBTAP00000013715/1-535 KVYQGHTLEK TYMGEDFFWA ITPVAGDYIL FKFDKPVNVE SYLFHSGNQD ENSTTRP00000005712/1-534 KVYQGHTLEK TYMGEDFFWA ITPVAGDYIL FKFDKPVNVE SYLFHSGNQE bmy_20677T0/1-290 KVYQGHTLEK TYMGEDFFWA ITPVAGDYIL FKFDKPVNVE SYLFHSGNQE BACU017697/1-535 KVYQGHTLEK TYMGEDFFWA ITPVAGDYIL FKFDKPVNVE SYLFHSGNQE 451 500 ENSP00000264968/1-535 HPGDILLNTT VEVLPFKSEG LEISKETKDK RLEDGYFRIG KFENGVAEGM ENSBTAP00000013715/1-535 HPGDILLNTT VEVLPLKSEG LDISKETKDK RLEDGYFRIG KFENGVAEGM ENSTTRP00000005712/1-534 HPGDILLNTT VEVLPLKSEG LEISKETKDK RLGDGYFRIG KFENGVAEGM bmy_20677T0/1-290 HPGDILLNTT VEVLPLKSEG LEISKETKDK RLEDGYFRIG KFENGVAEGM BACU017697/1-535 HPGDILLNTT VEVLPLKSEG LEISKETKDK RLEDGYFRIG KFENGVAEGM 501 550 ENSP00000264968/1-535 VDPSLNPISA FRLSVIQNSA VWAILNEIHI KKATN ENSBTAP00000013715/1-535 VDPNLNPISA FRLSVIQNSA VWAILNEIHI KKVTN ENSTTRP00000005712/1-534 VDPNLNPISA FRLSVIQNSA VWAILNEIH- KKVTN bmy_20677T0/1-290 VDPNLNPISA FRLXVIQNSA VWAILNEIHI KKVTN BACU017697/1-535 VDPNLNPISA FRLSVIQNSA VWAILNEIHI KKVTN